RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 RASA2Q15283 850 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 RNF187Q5TA31 235 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 KIAA0930Q6ICG6 404 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 LDB1Q86U70 411 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 TDRPQ86YL5 185 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 ZBED8Q8IZ13 594 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 ADGRF3Q8IZF5 1079 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 GALNT6Q8NCL4 622 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 LKAAEAR1Q8TD35 194 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 EPS8L3Q8TE67 593 aaKnown RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 ASZ1Q8WWH4 475 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 STARD8Q92502 1023 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 EXTL1Q92935 676 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 MFSD3Q96ES6 412 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 ELMO2Q96JJ3 720 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 PPM1MQ96MI6 270 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 PANX3Q96QZ0 392 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 SEMA4CQ9C0C4 833 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 P2RY12Q9H244 342 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 LRRC4CQ9HCJ2 640 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 SOHLH2Q9NX45 425 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 GNPTGQ9UJJ9 305 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 NOVA2Q9UNW9 492 aaKnown RBP12.78□□□□□ -0.36
ERCC3-209ENST00000494464 CDYLQ9Y232 598 aa12.78□□□□□ -0.36
ERCC3-209ENST00000494464 COL6A6A6NMZ7 2263 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 TERTO14746 1132 aaKnown RBP12.77□□□□□ -0.37
ERCC3-209ENST00000494464 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
ERCC3-209ENST00000494464 CDH16O75309 829 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 RPN2P04844 631 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 APOA4P06727 396 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 PAMP19021 973 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 PHBP35232 272 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 MAGOHP61326 146 aaKnown RBP12.77□□□□□ -0.37
ERCC3-209ENST00000494464 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 MC1RQ01726 317 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 CDC20Q12834 499 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 PRKG2Q13237 762 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 FASTKD3Q14CZ7 662 aaKnown RBP12.77□□□□□ -0.37
ERCC3-209ENST00000494464 TMED2Q15363 201 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 TBR1Q16650 682 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 MRNIPQ6NTE8 343 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 PWWP2BQ6NUJ5 590 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 NAPRTQ6XQN6 538 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 CAND1Q86VP6 1230 aaKnown RBP12.77□□□□□ -0.37
ERCC3-209ENST00000494464 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 CAPS2Q9BXY5 557 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 FANCEQ9HB96 536 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 XAB2Q9HCS7 855 aaKnown RBP12.77□□□□□ -0.37
ERCC3-209ENST00000494464 EURLQ9NYK6 297 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 ACTR10Q9NZ32 417 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 OR6C2Q9NZP2 312 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 IL17BQ9UHF5 180 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 PCDHGA6Q9Y5G7 932 aa12.77□□□□□ -0.37
ERCC3-209ENST00000494464 BSNQ9UPA5 3926 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 SLC9B1P1A6NJY1 282 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 GOLGA8MH3BSY2 632 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 KPNA5O15131 536 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 NDUFS3O75489 264 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 SLCO2B1O94956 709 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 VAPBO95292 243 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 ST6GAL1P15907 406 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 ITGB6P18564 788 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
ERCC3-209ENST00000494464 AOAHP28039 575 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 DLSTP36957 453 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 MAGEA3P43357 314 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 ADARP55265 1226 aaKnown RBP12.76□□□□□ -0.37
ERCC3-209ENST00000494464 HSPA14Q0VDF9 509 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 GPR19Q15760 415 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 LONRF1Q17RB8 773 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 PTRHD1Q6GMV3 140 aaKnown RBP12.76□□□□□ -0.37
ERCC3-209ENST00000494464 BORAQ6PGQ7 559 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 SPESP1Q6UW49 350 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 UNC5DQ6UXZ4 953 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 TAOK1Q7L7X3 1001 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 VRK3Q8IV63 474 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 DCUN1D3Q8IWE4 304 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 EXD3Q8N9H8 876 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
ERCC3-209ENST00000494464 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 TCF12Q99081 682 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 NRTNQ99748 197 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 ARHGAP9Q9BRR9 750 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
ERCC3-209ENST00000494464 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 XKR8Q9H6D3 395 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 KCND3Q9UK17 655 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 PADI1Q9ULC6 663 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms