RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 KLHL20Q9Y2M5 609 aa22.72■■□□□ 1.23
PLOD3-215ENST00000487563 ZNF451Q9Y4E5 1061 aa22.72■■□□□ 1.23
PLOD3-215ENST00000487563 TNRC6AQ8NDV7 1962 aaKnown RBP22.71■■□□□ 1.23
PLOD3-215ENST00000487563 PFDN6O15212 129 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 ZNF185O15231 689 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 VAPBO95292 243 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 S1PR4O95977 384 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 TPSB2P20231 275 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 FOLR3P41439 243 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 SLC9A5Q14940 896 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 TPSAB1Q15661 275 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 MRNIPQ6NTE8 343 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 SDCCAG8Q86SQ7 713 aaPredicted RBP22.71■■□□□ 1.23
PLOD3-215ENST00000487563 LRRC8AQ8IWT6 810 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 DNAJC22Q8N4W6 341 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 RAB42Q8N4Z0 105 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 OR2L8Q8NGY9 312 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 MIB2Q96AX9 1013 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 GBP5Q96PP8 586 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 MRM3Q9HC36 420 aaKnown RBP22.71■■□□□ 1.23
PLOD3-215ENST00000487563 EURLQ9NYK6 297 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 PTRH2Q9Y3E5 179 aaKnown RBP22.71■■□□□ 1.23
PLOD3-215ENST00000487563 MRFAP1Q9Y605 127 aa22.71■■□□□ 1.23
PLOD3-215ENST00000487563 NBASA2RRP1 2371 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 A6NL46 340 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 TTLL8A6PVC2 850 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 H3BMH7 237 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 RASGRF2O14827 1237 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 CTSBP07858 339 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 CD63P08962 238 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 RPS3P23396 243 aaKnown RBP eCLIP22.7■■□□□ 1.224e-6■□□□□ 10.6
PLOD3-215ENST00000487563 VPS41P49754 854 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 SARNPP82979 210 aaKnown RBP22.7■■□□□ 1.22
PLOD3-215ENST00000487563 SF1Q15637 639 aaKnown RBP22.7■■□□□ 1.22
PLOD3-215ENST00000487563 TRIP13Q15645 432 aaPredicted RBP22.7■■□□□ 1.22
PLOD3-215ENST00000487563 LRRC8BQ6P9F7 803 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 CES3Q6UWW8 571 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 EFCAB3Q8N7B9 438 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 LMNTD1Q8N9Z9 388 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 DLG3Q92796 817 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 RAD51AP1Q96B01 352 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 MFSD3Q96ES6 412 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 FOPNLQ96NB1 174 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 KIFC1Q9BW19 673 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 PCDHGB7Q9Y5F8 929 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 HECTD1Q9ULT8 2610 aa22.7■■□□□ 1.22
PLOD3-215ENST00000487563 BDKRB1P46663 353 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 GRB7Q14451 532 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 RNF187Q5TA31 235 aaPredicted RBP22.69■■□□□ 1.22
PLOD3-215ENST00000487563 FDCSPQ8NFU4 85 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 IP6K3Q96PC2 410 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 MENTQ9BUN1 341 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 MLXIPLQ9NP71 852 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 GPR83Q9NYM4 423 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 TSR3Q9UJK0 312 aaKnown RBP22.69■■□□□ 1.22
PLOD3-215ENST00000487563 SOX13Q9UN79 622 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 SEC16AO15027 2179 aa22.69■■□□□ 1.22
PLOD3-215ENST00000487563 SNRNP200O75643 2136 aaKnown RBP22.69■■□□□ 1.22
PLOD3-215ENST00000487563 PEX12O00623 359 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 KLF7O75840 302 aaPredicted RBP22.68■■□□□ 1.22
PLOD3-215ENST00000487563 CEACAM4O75871 244 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 ALAS2P22557 587 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 SSPNQ14714 243 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 KCTD19Q17RG1 926 aaPredicted RBP22.68■■□□□ 1.22
PLOD3-215ENST00000487563 NADK2Q4G0N4 442 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 NKAIN1Q4KMZ8 207 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 ZC3H12BQ5HYM0 836 aaKnown RBP22.68■■□□□ 1.22
PLOD3-215ENST00000487563 PAPD7Q5XG87 772 aaKnown RBP22.68■■□□□ 1.22
PLOD3-215ENST00000487563 CASC4Q6P4E1 433 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 CNSTQ6PJW8 725 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 MRGPREQ86SM8 312 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 MCATQ8IVS2 390 aaKnown RBP22.68■■□□□ 1.22
PLOD3-215ENST00000487563 PRELID2Q8N945 189 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 RUVBL2Q9Y230 463 aaKnown RBP22.68■■□□□ 1.22
PLOD3-215ENST00000487563 NFS1Q9Y697 457 aa22.68■■□□□ 1.22
PLOD3-215ENST00000487563 MED13Q9UHV7 2174 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 TCRBV7S3A2A0A539 114 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 GOLGA8KD6RF30 607 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 GOLGA8TH3BQL2 631 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 DPM1O60762 260 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 PAMP19021 973 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 ARNTP27540 789 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 FMO4P31512 558 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 CCNFP41002 786 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 ARSFP54793 590 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 CCZ1BP86790 482 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 CCZ1P86791 482 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-215ENST00000487563 GPS1Q13098 491 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 UBAP2LQ14157 1087 aaKnown RBP22.67■■□□□ 1.22
PLOD3-215ENST00000487563 CTSL3PQ5NE16 218 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 FIGLAQ6QHK4 219 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 MAGEC3Q8TD91 643 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 DENND1AQ8TEH3 1009 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 FER1L6-AS2Q96M78 137 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 NUDT9Q9BW91 350 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 SAMD15Q9P1V8 674 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 PPP2R2CQ9Y2T4 447 aa22.67■■□□□ 1.22
PLOD3-215ENST00000487563 FER1L5A0AVI2 2057 aa22.66■■□□□ 1.22
PLOD3-215ENST00000487563 H3BMM5 538 aa22.66■■□□□ 1.22
PLOD3-215ENST00000487563 VPS4BO75351 444 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms