RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 DRICH1Q6PGQ1 229 aaPredicted RBP23.62■■□□□ 1.37
LIME1-206ENST00000487026 CLEC18BQ6UXF7 455 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 RAB43Q86YS6 212 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 DCUN1D3Q8IWE4 304 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 CLEC18CQ8NCF0 446 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 CPT1CQ8TCG5 803 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 P2RY12Q9H244 342 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 EIF2B3Q9NR50 452 aaKnown RBP23.62■■□□□ 1.37
LIME1-206ENST00000487026 TXLNGQ9NUQ3 528 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 EURLQ9NYK6 297 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 LUZP4Q9P127 313 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.62■■□□□ 1.37
LIME1-206ENST00000487026 ZNF451Q9Y4E5 1061 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 NDUFS3O75489 264 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 RPN2P04844 631 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 ALAS2P22557 587 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 MGAT1P26572 445 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 NPY2RP49146 381 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 SSPNQ14714 243 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 TMED2Q15363 201 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 TLDC1Q6P9B6 456 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 UNC5DQ6UXZ4 953 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 MCATQ8IVS2 390 aaKnown RBP23.61■■□□□ 1.37
LIME1-206ENST00000487026 NDC1Q9BTX1 674 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 IL22Q9GZX6 179 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 BFARQ9NZS9 450 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 NDOR1Q9UHB4 597 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 SLC39A10Q9ULF5 831 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 RUVBL2Q9Y230 463 aaKnown RBP23.61■■□□□ 1.37
LIME1-206ENST00000487026 NFS1Q9Y697 457 aa23.61■■□□□ 1.37
LIME1-206ENST00000487026 TCRBV7S3A2A0A539 114 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 KRT87PA6NCN2 255 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 GOLGA8KD6RF30 607 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 GOLGA8TH3BQL2 631 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 MASP2O00187 686 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 CXCR5P32302 372 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 FOLR3P41439 243 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 UQCRFS1P47985 274 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 RRADP55042 308 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 SF1Q15637 639 aaKnown RBP23.6■■□□□ 1.37
LIME1-206ENST00000487026 CCSMST1Q4G0I0 132 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 NKAIN1Q4KMZ8 207 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 FCRL6Q6DN72 434 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 MRGPREQ86SM8 312 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 OTUD6BQ8N6M0 293 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 EFCAB3Q8N7B9 438 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 OR2L8Q8NGY9 312 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 PROKR1Q8TCW9 393 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 SKA2Q8WVK7 121 aaPredicted RBP23.6■■□□□ 1.37
LIME1-206ENST00000487026 C17orf62Q9BQA9 187 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 SYBUQ9NX95 663 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 GPR83Q9NYM4 423 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 GNPTGQ9UJJ9 305 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 TTC7AQ9ULT0 858 aaPredicted RBP23.6■■□□□ 1.37
LIME1-206ENST00000487026 SRPK3Q9UPE1 567 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 NAV2Q8IVL1 2488 aa23.6■■□□□ 1.37
LIME1-206ENST00000487026 PRRC2CQ9Y520 2896 aaKnown RBP23.59■■□□□ 1.37
LIME1-206ENST00000487026 RASGRF2O14827 1237 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 CEP104O60308 925 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 VPS4BO75351 444 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 EIF3BP55884 814 aaKnown RBP23.59■■□□□ 1.37
LIME1-206ENST00000487026 TRIP13Q15645 432 aaPredicted RBP23.59■■□□□ 1.37
LIME1-206ENST00000487026 JMJD6Q6NYC1 403 aaPredicted RBP23.59■■□□□ 1.37
LIME1-206ENST00000487026 FIGLAQ6QHK4 219 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 C4orf22Q6V702 233 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 TTLL10Q6ZVT0 673 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 FAM26EQ8N5C1 309 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 GSDMBQ8TAX9 411 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 SLC22A18Q96BI1 424 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 MFSD3Q96ES6 412 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 SLC22A11Q9NSA0 550 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 TSR3Q9UJK0 312 aaKnown RBP23.59■■□□□ 1.37
LIME1-206ENST00000487026 VPS4AQ9UN37 437 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 G3BP2Q9UN86 482 aaKnown RBP23.59■■□□□ 1.37
LIME1-206ENST00000487026 PCDHGB7Q9Y5F8 929 aa23.59■■□□□ 1.37
LIME1-206ENST00000487026 DPM1O60762 260 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 SORBS2O94875 1100 aaKnown RBP23.58■■□□□ 1.37
LIME1-206ENST00000487026 VAPBO95292 243 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 S1PR4O95977 384 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 CCDC175P0C221 793 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 GNLYP22749 145 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 ARNTP27540 789 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 FMO4P31512 558 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 BDKRB1P46663 353 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 PRR30Q53SZ7 412 aaPredicted RBP23.58■■□□□ 1.37
LIME1-206ENST00000487026 CTSL3PQ5NE16 218 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 MRPL14Q6P1L8 145 aaKnown RBP23.58■■□□□ 1.37
LIME1-206ENST00000487026 OR2Y1Q8NGV0 311 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 MAIP1Q8WWC4 291 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 PANX3Q96QZ0 392 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 KIFC1Q9BW19 673 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 ZKSCAN5Q9Y2L8 839 aa23.58■■□□□ 1.37
LIME1-206ENST00000487026 RP1L1Q8IWN7 2480 aaPredicted RBP23.58■■□□□ 1.37
LIME1-206ENST00000487026 USP9XQ93008 2570 aaPredicted RBP23.57■■□□□ 1.36
LIME1-206ENST00000487026 C1orf105O95561 183 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 ITGAXP20702 1163 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 RPS3P23396 243 aaKnown RBP eCLIP23.57■■□□□ 1.362e-16■□□□□ 11.1
LIME1-206ENST00000487026 MCM3P25205 808 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 LRRC8BQ6P9F7 803 aa23.57■■□□□ 1.36
LIME1-206ENST00000487026 TTC23LQ6PF05 361 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms