RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 S1PR4O95977 384 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 PDGFAP04085 211 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 CBSLP0DN79 551 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 SPTBP11277 2137 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 CBSP35520 551 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 CD97P48960 835 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 BASP1P80723 227 aaKnown RBP8.82□□□□□ -1
BRCA1-207ENST00000461798 TMED2Q15363 201 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 TYSND1Q2T9J0 566 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 PTRHD1Q6GMV3 140 aaKnown RBP8.82□□□□□ -1
BRCA1-207ENST00000461798 CLEC18BQ6UXF7 455 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 MED25Q71SY5 747 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 GSTA5Q7RTV2 222 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 SDCCAG8Q86SQ7 713 aaPredicted RBP8.82□□□□□ -1
BRCA1-207ENST00000461798 HPS6Q86YV9 775 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 RASGEF1CQ8N431 466 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 ZBTB2Q8N680 514 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 TMEM102Q8N9M5 508 aaPredicted RBP8.82□□□□□ -1
BRCA1-207ENST00000461798 TEX19Q8NA77 164 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 CLEC18CQ8NCF0 446 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 OR2L8Q8NGY9 312 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 HMGCLL1Q8TB92 370 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 PROKR1Q8TCW9 393 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 ZUFSPQ96AP4 578 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 RAD51AP1Q96B01 352 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 ZNF285Q96NJ3 590 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 BIRC8Q96P09 236 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 IP6K3Q96PC2 410 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 GBP5Q96PP8 586 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 ING2Q9H160 280 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 GNPTGQ9UJJ9 305 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 TTC7AQ9ULT0 858 aaPredicted RBP8.82□□□□□ -1
BRCA1-207ENST00000461798 PLAGL1Q9UM63 463 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 SOX13Q9UN79 622 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 SRPK3Q9UPE1 567 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 KLK4Q9Y5K2 254 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 MRFAP1Q9Y605 127 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
BRCA1-207ENST00000461798 TCRBV7S3A2A0A539 114 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MAGEB16A2A368 324 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 ARGFXA6NJG6 315 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 TARM1B6A8C7 271 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 C9J4A7 227 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 H3BMM5 538 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 RASGRF2O14827 1237 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 ZSCAN9O15535 394 aaPredicted RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 DNAJB5O75953 348 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 TMEM63AO94886 807 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 VAPBO95292 243 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 C1orf105O95561 183 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 CTSBP07858 339 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MLNP12872 115 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 NR1D1P20393 614 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MGAT1P26572 445 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 ATP5DP30049 168 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 PTGIRP43119 386 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 CCL11P51671 97 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 CSE1LP55060 971 aaKnown RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 CRADDP78560 199 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 DCDP81605 110 aaKnown RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 SARNPP82979 210 aaKnown RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 GBX1Q14549 363 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 KCNJ11Q14654 390 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 SSPNQ14714 243 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 IGFBP7Q16270 282 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 PTCHD3Q3KNS1 767 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 RNF187Q5TA31 235 aaPredicted RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 YOD1Q5VVQ6 348 aaPredicted RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 CPZQ66K79 652 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 KIAA0930Q6ICG6 404 aaPredicted RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 MRNIPQ6NTE8 343 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 TTC23LQ6PF05 361 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MCATQ8IVS2 390 aaKnown RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 KRT222Q8N1A0 295 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 LMNTD1Q8N9Z9 388 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MCUQ8NE86 351 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 DENND1AQ8TEH3 1009 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 LPGAT1Q92604 370 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 N4BP2L2Q92802 583 aaPredicted RBP8.81□□□□□ -1
BRCA1-207ENST00000461798 MIB2Q96AX9 1013 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 NACC2Q96BF6 587 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 MFSD3Q96ES6 412 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 SLC25A23Q9BV35 468 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 RAB11FIP5Q9BXF6 653 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 SLC7A5P2Q9GIP4 190 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 ACSS2Q9NR19 701 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 EURLQ9NYK6 297 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 PADI2Q9Y2J8 665 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 PPP2R2CQ9Y2T4 447 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 NEU2Q9Y3R4 380 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 JRKLQ9Y4A0 524 aa8.81□□□□□ -1
BRCA1-207ENST00000461798 PFDN6O15212 129 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 NRDCO43847 1150 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 SRPX2O60687 465 aaPredicted RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 MATN4O95460 622 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 IGHEP01854 428 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 ESR1P03372 595 aa8.8□□□□□ -1
BRCA1-207ENST00000461798 OGNP20774 298 aaKnown RBP8.8□□□□□ -1
BRCA1-207ENST00000461798 MAGP20916 626 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms