RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 TCF25Q9BQ70 676 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ZYG11BQ9C0D3 744 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 BTBD1Q9H0C5 482 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 LRRN3Q9H3W5 708 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 IPPKQ9H8X2 491 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 TREM1Q9NP99 234 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 hCG_2039718K7EN88 272 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 MATN3O15232 486 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PIGRP01833 764 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ESR1P03372 595 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PDGFAP04085 211 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PTPN1P18031 435 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 NMBRP28336 390 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 CD6P30203 668 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 OR1E1P30953 314 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 CPOXP36551 454 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ETV3P41162 512 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PPP2R2BQ00005 443 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 SREBF2Q12772 1141 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 GTF2H2Q13888 395 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 NFIXQ14938 502 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 SF3A2Q15428 464 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ZDHHC20Q5W0Z9 365 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 SLC22A10Q63ZE4 541 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 RAB12Q6IQ22 244 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 GTF2H2CQ6P1K8 395 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PIGZQ86VD9 579 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 IFNL1Q8IU54 200 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 CMTR2Q8IYT2 770 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 THAP6Q8TBB0 222 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ZFP90Q8TF47 636 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 NTAN1Q96AB6 310 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 CHFRQ96EP1 664 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 MGLLQ99685 303 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 FUZQ9BT04 418 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 POLR2J3Q9H1A7 115 aaKnown RBP4.9□□□□□ -1.62
PCDH9-203ENST00000456367 NUDT15Q9NV35 164 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 MIOSQ9NXC5 875 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 CALML5Q9NZT1 146 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PLEKHA6Q9Y2H5 1048 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 TIMM22Q9Y584 194 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 PREX1Q8TCU6 1659 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 LMO7Q8WWI1 1683 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 ZNF536O15090 1300 aa4.9□□□□□ -1.62
PCDH9-203ENST00000456367 TCAF2A6NFQ2 919 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 POLR1CO15160 346 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 KIAA0513O60268 411 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 RAD17O75943 681 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ALDH1A2O94788 518 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 CLIC3O95833 236 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 APOC3P02656 99 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MYCLP1P12525 358 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 HLA-EP13747 358 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 HOXD13P35453 343 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MLLT3P42568 568 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ARCN1P48444 511 aaKnown RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 CLCN4P51793 760 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 METAP1DQ6UB28 335 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 CDHR3Q6ZTQ4 885 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MARCH9Q86YJ5 346 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 UBE2J2Q8N2K1 259 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 LIX1Q8N485 282 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 GLIS1Q8NBF1 620 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 DDX1Q92499 740 aaKnown RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 FBXO32Q969P5 355 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MUL1Q969V5 352 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 RTP4Q96DX8 246 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 NEDD4LQ96PU5 975 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 RANBP9Q96S59 729 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 TM9SF2Q99805 663 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MRPL45Q9BRJ2 306 aaKnown RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 DPCDQ9BVM2 203 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MFSD1Q9H3U5 465 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MTG2Q9H4K7 406 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF304Q9HCX3 659 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 HPF1Q9NWY4 346 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 KCTD5Q9NXV2 234 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 INTS6Q9UL03 887 aaKnown RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 MGAT4BQ9UQ53 548 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 HCN4Q9Y3Q4 1203 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 PCDHGB7Q9Y5F8 929 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 PCDHGA7Q9Y5G6 932 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SNX10Q9Y5X0 201 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 NUMBLQ9Y6R0 609 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 DIP2CQ9Y2E4 1556 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 A8MV72 311 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 INPPL1O15357 1258 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SEC14L2O76054 403 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 PAPSS2O95340 614 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 RAB36O95755 333 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 FGBP02675 491 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 GNAO1P09471 354 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ITGAMP11215 1152 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ARFIP1P53367 373 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 YBEYP58557 167 aaPredicted RBP4.9□□□□□ -1.63
PCDH9-203ENST00000456367 IRF9Q00978 393 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 SMARCB1Q12824 385 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 NKAPLQ5M9Q1 402 aa4.9□□□□□ -1.63
PCDH9-203ENST00000456367 ATAD3CQ5T2N8 411 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms