RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ERLEC1Q96DZ1 483 aa10.43□□□□□ -0.74
CUX1-205ENST00000425244 CD244Q9BZW8 370 aa10.43□□□□□ -0.74
CUX1-205ENST00000425244 DPY30Q9C005 99 aa10.43□□□□□ -0.74
CUX1-205ENST00000425244 SPHK2Q9NRA0 654 aa10.43□□□□□ -0.74
CUX1-205ENST00000425244 LIMD1Q9UGP4 676 aa10.43□□□□□ -0.74
CUX1-205ENST00000425244 GMEB1Q9Y692 573 aa10.43□□□□□ -0.74
CUX1-205ENST00000425244 USP34Q70CQ2 3546 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ANKRD28O15084 1053 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 NPPAP01160 153 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CDK4P11802 303 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ACRV1P26436 265 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 AKT1P31749 480 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 IST1P53990 364 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CHRNB3Q05901 458 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 NEDD8Q15843 81 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 FAM98BQ52LJ0 330 aaKnown RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 SLC44A4Q53GD3 710 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ENPP6Q6UWR7 440 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 PAPD5Q8NDF8 572 aaKnown RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 SORCS1Q8WY21 1168 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 TMBIM1Q969X1 311 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ALG14Q96F25 216 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 LMAN2LQ9H0V9 348 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 POLR1BQ9H9Y6 1135 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CDC14AQ9UNH5 594 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 MUC3AQ02505 3323 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 DYTNA2CJ06 578 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 DEAF1O75398 565 aaPredicted RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 JAK1P23458 1154 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 MTHFRP42898 656 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 PPP1R8Q12972 351 aaKnown RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 LAPTM5Q13571 262 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 KCNC3Q14003 757 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CRY1Q16526 586 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CACHD1Q5VU97 1274 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ASTLQ6HA08 431 aaPredicted RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 SYCE2Q6PIF2 218 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 DET1Q7L5Y6 550 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 PATL1Q86TB9 770 aaKnown RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 ZSWIM9Q86XI8 627 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ERI1Q8IV48 349 aaKnown RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 RGL4Q8IZJ4 473 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CPXM2Q8N436 756 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 RHBDF1Q96CC6 855 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ISOC1Q96CN7 298 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ASIC4Q96FT7 647 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ZNF583Q96ND8 569 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 IKZF5Q9H5V7 419 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ATP13A3Q9H7F0 1226 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 ACTR8Q9H981 624 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 LRTM1Q9HBL6 345 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 CD320Q9NPF0 282 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 PKD2L2Q9NZM6 624 aa10.42□□□□□ -0.74
CUX1-205ENST00000425244 INTS6Q9UL03 887 aaKnown RBP10.42□□□□□ -0.74
CUX1-205ENST00000425244 HELZP42694 1942 aaKnown RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 NPIPB15A6NHN6 443 aaPredicted RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 K7EPI3 171 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 B4GAT1O43505 415 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 TCF3P15923 654 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 EPB42P16452 691 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GGT1P19440 569 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 RPS3P23396 243 aaKnown RBP eCLIP10.41□□□□□ -0.741e-7■■■■□ 20.3
CUX1-205ENST00000425244 SPAM1P38567 509 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GNPDA1P46926 289 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 MAPK10P53779 464 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GPRC6AQ5T6X5 926 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GPR107Q5VW38 600 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 SULT1C3Q6IMI6 304 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GCNT7Q6ZNI0 430 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 FAM217AQ8IXS0 508 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 PHACTR4Q8IZ21 702 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 BPIFB1Q8TDL5 484 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 FAM162AQ96A26 154 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ING2Q9H160 280 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 CARS2Q9HA77 564 aaKnown RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 ARL15Q9NXU5 204 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 KIAA1522Q9P206 1035 aaPredicted RBP10.41□□□□□ -0.74
CUX1-205ENST00000425244 CCL27Q9Y4X3 112 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ST14Q9Y5Y6 855 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 TMX2-CTNND1H3BSU7 103 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ARNTLO00327 626 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 MANBAO00462 879 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GNGT2O14610 69 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GSNP06396 782 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 RAP2AP10114 183 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ELK4P28324 431 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ARSFP54793 590 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 HPCAP84074 193 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 CYP4F3Q08477 520 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 PMS2P3Q13401 168 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 PLEKHG6Q3KR16 790 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ZBED5Q49AG3 693 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 RFLNAQ6ZTI6 216 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 ANKRD46Q86W74 232 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 RIMKLAQ8IXN7 391 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 NXPE1Q8N323 547 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 GTF2H4Q92759 462 aa10.41□□□□□ -0.74
CUX1-205ENST00000425244 SDCCAG3Q96C92 435 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms