RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 C16orf46Q6P387 395 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 CNSTQ6PJW8 725 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 TAX1BP1Q86VP1 789 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 DNAJC22Q8N4W6 341 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 ZBTB2Q8N680 514 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 LRFN5Q96NI6 719 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 PCMTD2Q9NV79 361 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 FBXO5Q9UKT4 447 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 KLHL20Q9Y2M5 609 aa17.2■□□□□ 0.34
SBDSP1-202ENST00000423945 PFDN6O15212 129 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 TTI1O43156 1089 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 KDM1AO60341 852 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 KATNA1O75449 491 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 HAUS5O94927 633 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 PGAM1P18669 254 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 RPS18P62269 152 aaKnown RBP17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 DR1Q01658 176 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 HSP90AA5PQ58FG0 334 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 HIBCHQ6NVY1 386 aaPredicted RBP17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 BORAQ6PGQ7 559 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 PCGF5Q86SE9 256 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 DSELQ8IZU8 1212 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 RAD51AP1Q96B01 352 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 TCTN2Q96GX1 697 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 EBNA1BP2Q99848 306 aaKnown RBP17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 FANCEQ9HB96 536 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 IARS2Q9NSE4 1012 aaKnown RBP17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 VPS9D1Q9Y2B5 631 aa17.19■□□□□ 0.34
SBDSP1-202ENST00000423945 PCM1Q15154 2024 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 A0A1W2PPV9 198 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ARHGEF33A8MVX0 844 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 C21orf140B9A014 251 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 CAPN1P07384 714 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 MAGP20916 626 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 GABRB3P28472 473 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ITGA1P56199 1179 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 TIAL1Q01085 375 aaKnown RBP eCLIP17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ERV3-1Q14264 604 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 KLHL38Q2WGJ6 581 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 BBS9Q3SYG4 887 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ZNF385CQ66K41 422 aaPredicted RBP17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 SYDE1Q6ZW31 735 aaPredicted RBP17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 KCNMB4Q86W47 210 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 LMNTD2Q8IXW0 634 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 SKA2Q8WVK7 121 aaPredicted RBP17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 CATSPER2Q96P56 530 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ARHGAP9Q9BRR9 750 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 SPRTNQ9H040 489 aaPredicted RBP17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 CHST8Q9H2A9 424 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ACTL8Q9H568 366 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 ACTR5Q9H9F9 607 aaPredicted RBP17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 KCND3Q9UK17 655 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 CCDC88CQ9P219 2028 aa17.18■□□□□ 0.34
SBDSP1-202ENST00000423945 CCDC188H7C350 402 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 MEN1O00255 615 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 ZNF749O43361 778 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 PSIP1O75475 530 aaKnown RBP17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 CREG1O75629 220 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 ERVK-10P10266 1014 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 CYP2A7P20853 494 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 PSMB5P28074 263 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 MC1RQ01726 317 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 CUL1Q13616 776 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 FASTKQ14296 549 aaKnown RBP17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 MORF4L2Q15014 288 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 DEFB109BQ30KR1 87 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 FCRL6Q6DN72 434 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 C2CD4AQ8NCU7 369 aaPredicted RBP17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 HMGCLL1Q8TB92 370 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 CD200R1Q8TD46 325 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 MR1Q95460 341 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 RUNDC3BQ96NL0 473 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 FAM167BQ9BTA0 163 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 SLC17A6Q9P2U8 582 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 SERTAD3Q9UJW9 196 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 SLC39A10Q9ULF5 831 aa17.17■□□□□ 0.34
SBDSP1-202ENST00000423945 PCSK5Q92824 1860 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 E5RI56 91 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 E7EQ34 232 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 SEC31AO94979 1220 aaKnown RBP17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 RECKO95980 971 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 ERGP11308 486 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 PTPN4P29074 926 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 CCNFP41002 786 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 ELK3P41970 407 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 ITGA8P53708 1063 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 POLE2P56282 527 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 YBX1P67809 324 aaKnown RBP17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 MRPS25P82663 173 aaKnown RBP17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 PTCHD3Q3KNS1 767 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 SPANXN3Q5MJ09 141 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 HP1BP3Q5SSJ5 553 aaPredicted RBP17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 FAM69BQ5VUD6 431 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 FAM198BQ6UWH4 519 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 CYHR1Q6ZMK1 362 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 SYTL1Q8IYJ3 562 aa17.16■□□□□ 0.34
SBDSP1-202ENST00000423945 CALML6Q8TD86 181 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms