RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MLKLQ8NB16 471 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 STKLD1Q8NE28 680 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 OR7G3Q8NG95 312 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RP9Q8TA86 221 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 LRRC20Q8TCA0 184 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF473Q8WTR7 871 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TRIB2Q92519 343 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 P3H4Q92791 437 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TOP1MTQ969P6 601 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TMEM143Q96AN5 459 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TOE1Q96GM8 510 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 C1orf159Q96HA4 380 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FBXL20Q96IG2 436 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 LOXL4Q96JB6 756 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PRRC1Q96M27 445 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 COQ10AQ96MF6 247 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CSPG4P5Q96PW8 444 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 LRRC37BQ96QE4 947 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TRIB1Q96RU8 372 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF607Q96SK3 696 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 BPIFA3Q9BQP9 254 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PIGQQ9BRB3 760 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FAM213AQ9BRX8 229 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RTKNQ9BST9 563 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 NUP58Q9BVL2 599 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF416Q9BWM5 594 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 TOLLIPQ9H0E2 274 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RAB17Q9H0T7 212 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MS4A5Q9H3V2 200 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FBXO44Q9H4M3 255 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MINDY3Q9H8M7 445 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 SLC6A13Q9NSD5 602 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 UFSP2Q9NUQ7 469 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PARVAQ9NVD7 372 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 DNAJC17Q9NVM6 304 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RIC8BQ9NVN3 520 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 FAIMQ9NVQ4 179 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RMND1Q9NWS8 449 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 BTG4Q9NY30 223 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PLEK2Q9NYT0 353 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MARCH2Q9P0N8 246 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ARHGAP20Q9P2F6 1191 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 CPNE7Q9UBL6 633 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 DKK4Q9UBT3 224 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 LPAR3Q9UBY5 353 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 RGS17Q9UGC6 210 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MAGEL2Q9UJ55 1249 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 NAGKQ9UJ70 344 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 ADAM28Q9UKQ2 775 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 PSMD13Q9UNM6 376 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 DIMT1Q9UNQ2 313 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 HPSEQ9Y251 543 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 MTO1Q9Y2Z2 717 aaKnown RBP3.55□□□□□ -1.84
SF3B1-203ENST00000414174 INSL6Q9Y581 213 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 LIPGQ9Y5X9 500 aa3.55□□□□□ -1.84
SF3B1-203ENST00000414174 UHRF1BP1LA0JNW5 1464 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FHOD3Q2V2M9 1422 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 LRPPRCP42704 1394 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 UTYO14607 1347 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ASTN2O75129 1339 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NRCAMQ92823 1304 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF541Q9H0D2 1346 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 A0A087WV48 116 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 A0A0A6YYH2 397 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 A6NJ64 397 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PCP4L1A6NKN8 68 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 C4orf47A7E2U8 309 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PDZK1P1A8MUH7 402 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 BECN2A8MW95 431 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 KDM4EB2RXH2 506 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NPIPB8E9PQR5 432 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 QSOX1O00391 747 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CES2O00748 559 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CTDSP2O14595 271 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF185O15231 689 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 GRID2O43424 1007 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 HCN1O60741 890 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SCN2BO60939 215 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CNTN5O94779 1100 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NTSR2O95665 410 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FTLP02792 175 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 IFNA6P05013 189 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SCG5P05408 212 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SNRPB2P08579 225 aaKnown RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 LCP1P13796 627 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NPPBP16860 134 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 KRT15P19012 456 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 TNNI1P19237 187 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 MSH3P20585 1137 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 DDCP20711 480 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CD27P26842 260 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 G0S2P27469 103 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 PIK3R1P27986 724 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 POU1F1P28069 291 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 CYP2C18P33260 490 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 RYKP34925 604 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 SOAT1P35610 550 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 FRKP42685 505 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-203ENST00000414174 KCNJ3P48549 501 aa3.54□□□□□ -1.84
SF3B1-203ENST00000414174 NPY2RP49146 381 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms