RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 TAX1BP1Q86VP1 789 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 KCNMB4Q86W47 210 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 LMNTD2Q8IXW0 634 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 ZNF843Q8N446 348 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 C19orf47Q8N9M1 422 aaKnown RBP13.76□□□□□ -0.21
CLCN6-203ENST00000376490 OR2L8Q8NGY9 312 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 STARD8Q92502 1023 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 RAD51AP1Q96B01 352 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MED8Q96G25 268 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 TCTN2Q96GX1 697 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 FOPNLQ96NB1 174 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 RUNDC3BQ96NL0 473 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 RUFY1Q96T51 708 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 KRT12Q99456 494 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 TRIM31Q9BZY9 425 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 SPRTNQ9H040 489 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-203ENST00000376490 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 RNF14Q9UBS8 474 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MED16Q9Y2X0 877 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 PCDHB3Q9Y5E6 796 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 MED13Q9UHV7 2174 aa13.76□□□□□ -0.21
CLCN6-203ENST00000376490 PRICKLE3O43900 615 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-203ENST00000376490 CPNE3O75131 537 aaKnown RBP13.75□□□□□ -0.21
CLCN6-203ENST00000376490 CTSBP07858 339 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 FURINP09958 794 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 FAM87AP0C7U9 286 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 ELK3P41970 407 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 ITGA8P53708 1063 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 C19orf57Q0VDD7 668 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 CDC20Q12834 499 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 ERV3-1Q14264 604 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 CRYMQ14894 314 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 MORF4L2Q15014 288 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 DEFB110Q30KQ9 67 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 DNAJC22Q8N4W6 341 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 GIMAP7Q8NHV1 300 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 MR1Q95460 341 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 CLIP3Q96DZ5 547 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 KCND3Q9UK17 655 aa13.75□□□□□ -0.21
CLCN6-203ENST00000376490 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 MEN1O00255 615 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 TP73O15350 636 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 ZNF749O43361 778 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CREG1O75629 220 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 TTC4O95801 387 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 KLK3P07288 261 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CYP2A7P20853 494 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 MAGP20916 626 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 GABRB3P28472 473 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 ATP5DP30049 168 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CASQ1P31415 396 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CARSP49589 748 aaKnown RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 ITGA1P56199 1179 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 MC1RQ01726 317 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CUL1Q13616 776 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 SF1Q15637 639 aaKnown RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 DEFB109BQ30KR1 87 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 PDIK1LQ8N165 341 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 C2CD4AQ8NCU7 369 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 DENND1AQ8TEH3 1009 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 N4BP2L2Q92802 583 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 INPP5DQ92835 1189 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 SLC22A18Q96BI1 424 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 SNF8Q96H20 258 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 LRFN5Q96NI6 719 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 GPR21Q99679 349 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 FAM167BQ9BTA0 163 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CHST8Q9H2A9 424 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 PLAC1Q9HBJ0 212 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 CHMP2BQ9UQN3 213 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 FARSAQ9Y285 508 aaKnown RBP13.74□□□□□ -0.21
CLCN6-203ENST00000376490 SNX24Q9Y343 169 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 DHRS7Q9Y394 339 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 PCDHGA6Q9Y5G7 932 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 MRFAP1Q9Y605 127 aa13.74□□□□□ -0.21
CLCN6-203ENST00000376490 TNRC6AQ8NDV7 1962 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 C21orf140B9A014 251 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 E7EQ34 232 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 H3BMH7 237 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 PSIP1O75475 530 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 OR2B3O76000 313 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 SEC31AO94979 1220 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 AHSGP02765 367 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 PSMB5P28074 263 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 RORAP35398 523 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 CCNFP41002 786 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 GRIA3P42263 894 aa13.73□□□□□ -0.21
CLCN6-203ENST00000376490 RPL21P46778 160 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 RPS18P62269 152 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 ETF1P62495 437 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 FASTKQ14296 549 aaKnown RBP13.73□□□□□ -0.21
CLCN6-203ENST00000376490 CRTC2Q53ET0 693 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms