RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 BEND7Q8N7W2 519 aaPredicted RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 OR8D1Q8WZ84 308 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 RDH12Q96NR8 316 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 EIF3KQ9UBQ5 218 aaKnown RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 FZD4Q9ULV1 537 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 RNF6Q9Y252 685 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 BHMG1C9JSJ3 638 aaPredicted RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 NEDD8-MDP1E9PL57 170 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 SDHDO14521 159 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 NPPAP01160 153 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 G6PDP11413 515 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 GGT5P36269 586 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 ARFIP1P53367 373 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 PLA2G4EQ3MJ16 856 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 OGFRL1Q5TC84 451 aaPredicted RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 OR4F3Q6IEY1 312 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 POF1BQ8WVV4 589 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 DNASE1L2Q92874 299 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 SH3PXD2BA1X283 911 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 H0YAE9 185 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 ABHD18Q0P651 414 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 TSTQ16762 297 aaKnown RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 TNFAIP8L2Q6P589 184 aaPredicted RBP16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 HFE2Q6ZVN8 426 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 CFAP206Q8IYR0 622 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 OR10H4Q8NGA5 316 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 COL21A1Q96P44 957 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 CALML5Q9NZT1 146 aa16.78■□□□□ 0.28
PTP4A1-201ENST00000370651 ENPP3O14638 875 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 OAS1P00973 400 aaKnown RBP16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 XKP51811 444 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 ARF5P84085 180 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 SNX20Q7Z614 316 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 UPF1Q92900 1129 aaKnown RBP eCLIP16.77■□□□□ 0.282e-8■□□□□ 10.1
PTP4A1-201ENST00000370651 SPACA7Q96KW9 195 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 IRF2BPLQ9H1B7 796 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CKLFQ9UBR5 152 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 TBC1D24Q9ULP9 559 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 TLR6Q9Y2C9 796 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 NOTOA8MTQ0 251 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 PCDH7O60245 1069 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 SNAP29O95721 258 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CTSEP14091 401 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CASP9P55211 416 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CREMQ03060 361 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 FAM46CQ5VWP2 391 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 SLC24A5Q71RS6 500 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 PHYKPLQ8IUZ5 450 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 GALNT12Q8IXK2 581 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 KLHL6Q8WZ60 621 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 KCNA7Q96RP8 456 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 CCM2LQ9NUG4 571 aaPredicted RBP16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 PIK3C2AO00443 1686 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 XPNPEP2O43895 674 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 SCN2BO60939 215 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 ELK4P28324 431 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 SMCO1Q147U7 214 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF678Q5SXM1 525 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 TLDC1Q6P9B6 456 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 FRRS1Q6ZNA5 592 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 SIPA1Q96FS4 1042 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 TUBA1CQ9BQE3 449 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 BCL2L14Q9BZR8 327 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 VPS29Q9UBQ0 182 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 AASSQ9UDR5 926 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF487B1APH4 448 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 TLR4O00206 839 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 CLCN2P51788 898 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 SF1Q15637 639 aaKnown RBP16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 PPP1R3AQ16821 1122 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 CRB2Q5IJ48 1285 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 SLC30A8Q8IWU4 369 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 OR4F6Q8NGB9 312 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 BIRC8Q96P09 236 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 MINDY3Q9H8M7 445 aa16.77■□□□□ 0.27
PTP4A1-201ENST00000370651 A0A1W2PRB8 838 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 C9IYK1 514 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 OPN1SWP03999 348 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 AMD1P17707 334 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 GJA9P57773 515 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 PRR5P85299 388 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 ATXN7L2Q5T6C5 722 aaPredicted RBP16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 PYCR2Q96C36 320 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 SLC35G5Q96KT7 338 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 SLC30A2Q9BRI3 323 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 GDAP2Q9NXN4 497 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 MRPS23Q9Y3D9 190 aaKnown RBP16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 PTGS2P35354 604 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 STT3AP46977 705 aa16.76■□□□□ 0.27
PTP4A1-201ENST00000370651 CBLBQ13191 982 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms