RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 FAM60AQ9NP50 221 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 IARS2Q9NSE4 1012 aaKnown RBP14.1□□□□□ -0.15
ERCC1-203ENST00000340192 SERTAD3Q9UJW9 196 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 KCND3Q9UK17 655 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 FBXO5Q9UKT4 447 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 MED16Q9Y2X0 877 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 PCDHB3Q9Y5E6 796 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 MRFAP1Q9Y605 127 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 ATRXP46100 2492 aa14.1□□□□□ -0.15
ERCC1-203ENST00000340192 HCRTR1O43613 425 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 KATNA1O75449 491 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 SEC31AO94979 1220 aaKnown RBP14.09□□□□□ -0.15
ERCC1-203ENST00000340192 CYP2A7P20853 494 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 CASQ1P31415 396 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 ITGA8P53708 1063 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 MC1RQ01726 317 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 CDC20Q12834 499 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 GPS2Q13227 327 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 DEFB110Q30KQ9 67 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 SPANXN3Q5MJ09 141 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 HP1BP3Q5SSJ5 553 aaPredicted RBP14.09□□□□□ -0.15
ERCC1-203ENST00000340192 ATP1A1-AS1Q5TC04 95 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 FAM20CQ8IXL6 584 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 GIMAP7Q8NHV1 300 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 KCNJ9Q92806 393 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 SLC22A18Q96BI1 424 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 MED8Q96G25 268 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 SNF8Q96H20 258 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 RAB11FIP5Q9BXF6 653 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 CHRNA10Q9GZZ6 450 aa14.09□□□□□ -0.15
ERCC1-203ENST00000340192 EFCAB8A8MWE9 144 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 C21orf140B9A014 251 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 SMAPO00193 183 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 TP73O15350 636 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 FAM87AP0C7U9 286 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 MAGP20916 626 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 OAS2P29728 719 aaKnown RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 ELK3P41970 407 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 GABRA4P48169 554 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 ITGA1P56199 1179 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 ETF1P62495 437 aaKnown RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 DNASE1L3Q13609 305 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 CUL1Q13616 776 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 HIF1AQ16665 826 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 TTLL9Q3SXZ7 439 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 CRTC2Q53ET0 693 aaPredicted RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 C16orf46Q6P387 395 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 BORAQ6PGQ7 559 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 ZNF517Q6ZMY9 492 aaPredicted RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 SPNS2Q8IVW8 549 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 ZNF843Q8N446 348 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 RAB42Q8N4Z0 105 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 C2CD4AQ8NCU7 369 aaPredicted RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 DENND1AQ8TEH3 1009 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 N4BP2L2Q92802 583 aaPredicted RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 MR1Q95460 341 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 CLIP3Q96DZ5 547 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 CFAP36Q96G28 342 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 LRFN5Q96NI6 719 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 CATSPER2Q96P56 530 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 RUFY1Q96T51 708 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 WDR83Q9BRX9 315 aaKnown RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 ACTR5Q9H9F9 607 aaPredicted RBP14.08□□□□□ -0.16
ERCC1-203ENST00000340192 PLAC1Q9HBJ0 212 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 KLHL42Q9P2K6 505 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 CHMP2BQ9UQN3 213 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 KLHL20Q9Y2M5 609 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 PCDHGA6Q9Y5G7 932 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 COMMD10Q9Y6G5 202 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 BSNQ9UPA5 3926 aa14.08□□□□□ -0.16
ERCC1-203ENST00000340192 PCM1Q15154 2024 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 ARHGEF33A8MVX0 844 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 E7EQ34 232 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 MEN1O00255 615 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 ZNF749O43361 778 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 PRICKLE3O43900 615 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 PSIP1O75475 530 aaKnown RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 KLK3P07288 261 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 RORAP35398 523 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 RPL21P46778 160 aaKnown RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 MRPS25P82663 173 aaKnown RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 C19orf57Q0VDD7 668 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 SF1Q15637 639 aaKnown RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 LCN10Q6JVE6 187 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 SYT10Q6XYQ8 523 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 GPR135Q8IZ08 494 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 DSELQ8IZU8 1212 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 DNAJC22Q8N4W6 341 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 SPATA4Q8NEY3 305 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 GABPB2Q8TAK5 448 aaPredicted RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 HMGCLL1Q8TB92 370 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 CERS2Q96G23 380 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 GPR21Q99679 349 aa14.07□□□□□ -0.16
ERCC1-203ENST00000340192 AARSD1Q9BTE6 412 aaKnown RBP14.07□□□□□ -0.16
ERCC1-203ENST00000340192 ACTL8Q9H568 366 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms