RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MED8Q96G25 268 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 ELMO2Q96JJ3 720 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 PANX3Q96QZ0 392 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 TTC1Q99614 292 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 SYTL2Q9HCH5 934 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 FBXO6Q9NRD1 293 aaPredicted RBP10.85□□□□□ -0.67
CLCC1-201ENST00000302500 SLC22A11Q9NSA0 550 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 STARD5Q9NSY2 213 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 SLC17A6Q9P2U8 582 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 CIDEBQ9UHD4 219 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 RARRES3Q9UL19 164 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 MYO18BQ8IUG5 2567 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 ASH1LQ9NR48 2969 aaKnown RBP10.85□□□□□ -0.67
CLCC1-201ENST00000302500 COL12A1Q99715 3063 aa10.85□□□□□ -0.67
CLCC1-201ENST00000302500 GOLGA6L10A0A0M3HER8 536 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CCDC188H7C350 402 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CNOT3O75175 753 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 NDUFS3O75489 264 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 WISP3O95389 354 aaPredicted RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 MED26O95402 600 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 NTRK1P04629 796 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 APOA4P06727 396 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PGAM1P18669 254 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CDH3P22223 829 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PPARGP37231 505 aaPredicted RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SKIV2L2P42285 1042 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 BDKRB1P46663 353 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 RPL21P46778 160 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SARNPP82979 210 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 IL10RAQ13651 578 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 FASTKQ14296 549 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 FASTKD3Q14CZ7 662 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 LONRF1Q17RB8 773 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SYTL3Q4VX76 610 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 HSP90AA5PQ58FG0 334 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 ASB11Q8WXH4 323 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CAPZA3Q96KX2 299 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 AARSD1Q9BTE6 412 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 FAM117AQ9C073 453 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 ZMYND15Q9H091 742 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KLHL25Q9H0H3 589 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 GPN2Q9H9Y4 310 aaPredicted RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PDE7BQ9NP56 450 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 MOCS1Q9NZB8 636 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 GRHL1Q9NZI5 618 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 RNF14Q9UBS8 474 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 ANAPC5Q9UJX4 755 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 FBXO5Q9UKT4 447 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 DHRS7Q9Y394 339 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 DOCK10Q96BY6 2186 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 GSAPA4D1B5 854 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 ZNF891A8MT65 544 aaPredicted RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 C21orf140B9A014 251 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 H3BMM5 538 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KPNA5O15131 536 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CTSVO60911 334 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 CPNE3O75131 537 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SCRG1O75711 98 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KLF7O75840 302 aaPredicted RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 AHSGP02765 367 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 FAM87AP0C7U9 286 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 MAGP20916 626 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PSMB5P28074 263 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 DLSTP36957 453 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 ETF1P62495 437 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SNRPNP63162 240 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 NFKB2Q00653 900 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 DR1Q01658 176 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PRKAA1Q13131 559 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 DNASE1L3Q13609 305 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KLHL38Q2WGJ6 581 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 RBM20Q5T481 1227 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 TEDDM1Q5T9Z0 273 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 DUPD1Q68J44 220 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PTRHD1Q6GMV3 140 aaKnown RBP10.84□□□□□ -0.67
CLCC1-201ENST00000302500 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KCNMB4Q86W47 210 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 ZBTB2Q8N680 514 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 SPATA4Q8NEY3 305 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 FAM136AQ96C01 138 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 TCTN2Q96GX1 697 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 GBP5Q96PP8 586 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 LNPEPQ9UIQ6 1025 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 PADI1Q9ULC6 663 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KLHL20Q9Y2M5 609 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 KCNMB2Q9Y691 235 aa10.84□□□□□ -0.67
CLCC1-201ENST00000302500 NBASA2RRP1 2371 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 PRRC2CQ9Y520 2896 aaKnown RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 OR2A25A4D2G3 310 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 FITM1A5D6W6 292 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 MEN1O00255 615 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 EIF3FO00303 357 aaPredicted RBP10.83□□□□□ -0.68
CLCC1-201ENST00000302500 MT-ND3P03897 115 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 ERVK-10P10266 1014 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 PAMP19021 973 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 ELK3P41970 407 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 GRIA3P42263 894 aa10.83□□□□□ -0.68
CLCC1-201ENST00000302500 PGGT1BP53609 377 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms