RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 CALB2P22676 271 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 AK4P27144 223 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 CCR10P46092 362 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 KCNC1P48547 511 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 RPL14P50914 215 aaKnown RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 GABREP78334 506 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 ELF3P78545 371 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 CCL7P80098 99 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 TBC1D25Q3MII6 688 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 CTSL3PQ5NE16 218 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 CERS6Q6ZMG9 384 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 RBM44Q6ZP01 1051 aaKnown RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 SNIP1Q8TAD8 396 aaKnown RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 RIOK2Q9BVS4 552 aaKnown RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 CCDC106Q9BWC9 280 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 P2RY12Q9H244 342 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 TFB2MQ9H5Q4 396 aaKnown RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 COG4Q9H9E3 785 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 SATB2Q9UPW6 733 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 TMEM98Q9Y2Y6 226 aa16.96■□□□□ 0.31
HOXC6-201ENST00000243108 PCYT1BQ9Y5K3 369 aaPredicted RBP16.96■□□□□ 0.31
HOXC6-201ENST00000243108 B4DGG1 531 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 SLCO1B7G3V0H7 640 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 ESR1P03372 595 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 PYGLP06737 847 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 KRT16P08779 473 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 HOXB3P14651 431 aaPredicted RBP16.96■□□□□ 0.3
HOXC6-201ENST00000243108 PTPN4P29074 926 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 GPR1P46091 355 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 GNPDA1P46926 289 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 CYB5D1Q6P9G0 228 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 DOK6Q6PKX4 331 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 PAQR3Q6TCH7 311 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 ADAMTSL4Q6UY14 1074 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 B3GNT8Q7Z7M8 397 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 TREML1Q86YW5 311 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 KCNJ9Q92806 393 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.96■□□□□ 0.3
HOXC6-201ENST00000243108 L3HYPDHQ96EM0 354 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 SCARF2Q96GP6 870 aaPredicted RBP16.96■□□□□ 0.3
HOXC6-201ENST00000243108 ASCL3Q9NQ33 180 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 ACSS2Q9NR19 701 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 ARMCX1Q9P291 453 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 ZDHHC2Q9UIJ5 367 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 APPL1Q9UKG1 709 aa16.96■□□□□ 0.3
HOXC6-201ENST00000243108 CNOT6Q9ULM6 557 aaKnown RBP16.96■□□□□ 0.3
HOXC6-201ENST00000243108 TRBV5-4A0A0C4DH59 114 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 H3BMM5 538 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 HDAC3O15379 428 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 OR1I1O60431 355 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 VPS26AO75436 327 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 LSSP48449 732 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 GALNT1Q10472 559 aaPredicted RBP16.95■□□□□ 0.3
HOXC6-201ENST00000243108 C3orf38Q5JPI3 329 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 ZNF765Q7L2R6 523 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 PDZD3Q86UT5 571 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 NLRP8Q86W28 1048 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 CCNYL1Q8N7R7 359 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 FGF11Q92914 225 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 COX14Q96I36 57 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 ATOH8Q96SQ7 321 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 GPR21Q99679 349 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 DPEP2Q9H4A9 486 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 SYNDIG1Q9H7V2 258 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 POLR1BQ9H9Y6 1135 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 VTI1BQ9UEU0 232 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 RNF215Q9Y6U7 377 aa16.95■□□□□ 0.3
HOXC6-201ENST00000243108 CCDC189A1A4V9 331 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 GRID2O43424 1007 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 MGRN1O60291 552 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 DXOO77932 396 aaKnown RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 PRAMEF1O95521 474 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 BPIP17213 487 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 IMPDH1P20839 514 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 ALDH18A1P54886 795 aaKnown RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 ATP6V0D1P61421 351 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 CTBSQ01459 385 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 OR4D1Q15615 310 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 C14orf28Q4W4Y0 310 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 CFAP157Q5JU67 520 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 TAS2R42Q7RTR8 314 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 SNX20Q7Z614 316 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 C17orf82Q86X59 251 aaPredicted RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 NKAPQ8N5F7 415 aaKnown RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 Q8N9G6 341 aaPredicted RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 PATE1Q8WXA2 126 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 UTP4Q969X6 686 aaKnown RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 KIAA1191Q96A73 305 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 RAB3IPQ96QF0 476 aaPredicted RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 IL26Q9NPH9 171 aa16.94■□□□□ 0.3
HOXC6-201ENST00000243108 TRNAU1APQ9NX07 287 aaKnown RBP16.94■□□□□ 0.3
HOXC6-201ENST00000243108 FADS2P1A8MWK0 482 aa16.93■□□□□ 0.3
HOXC6-201ENST00000243108 PRMT5O14744 637 aaPredicted RBP16.93■□□□□ 0.3
HOXC6-201ENST00000243108 INPP4BO15327 924 aa16.93■□□□□ 0.3
HOXC6-201ENST00000243108 GPR39O43194 453 aa16.93■□□□□ 0.3
HOXC6-201ENST00000243108 DIAPH2O60879 1101 aa16.93■□□□□ 0.3
HOXC6-201ENST00000243108 SMIM24O75264 130 aa16.93■□□□□ 0.3
HOXC6-201ENST00000243108 NIPSNAP2O75323 286 aa16.93■□□□□ 0.3
HOXC6-201ENST00000243108 RPLP0P05388 317 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms