RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Mthfd1lQ3V3R1 977 aaKnown RBP22.34■■□□□ 1.17
Upf3a-201ENSMUST00000043767 SybuQ8BHS8 665 aa22.34■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Rap2cQ8BU31 183 aa22.34■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Npsr1Q8BZP8 371 aa22.34■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Cnot6Q8K3P5 557 aa22.34■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Pdia5Q921X9 517 aa22.34■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Zfp277E9Q6D6 583 aaKnown RBP22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Hoxa9P09631 271 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Dpy19l2P0CW70 773 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 AdslP54822 484 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Pced1aQ6P1Z5 449 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Rexo4Q6PAQ4 432 aaKnown RBP22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Gxylt2Q810K9 444 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Pabpc5Q8C7D3 381 aaKnown RBP22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Plbd1Q8VCI0 550 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Mtfr1Q99MB2 328 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Trappc5Q9CQA1 188 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Ppp1r2Q9DCL8 206 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Ing2Q9ESK4 281 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Ascl3Q9JJR7 174 aa22.33■■□□□ 1.17
Upf3a-201ENSMUST00000043767 Gm35911A0A1D5RLS7 214 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ttll2A4Q9E4 540 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cbx4O55187 551 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ebf1Q07802 591 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Mapkap1Q8BKH7 522 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Otud7aQ8R554 926 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Vps11Q91W86 941 aaKnown RBP22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Adgre4Q91ZE5 689 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Trim12aQ99PQ1 284 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Fndc8Q9D2H8 321 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Tbc1d21Q9D9D3 336 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 1700086D15RikQ9D9E9 151 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Amdhd1Q9DBA8 426 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Acsl4Q9QUJ7 711 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 CorinQ9Z319 1113 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Spin2dB1B0R2 236 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Erich2E9Q1A6 463 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Zbtb10E9Q8X5 861 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Chst8Q8BQ86 417 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Plcl2Q8K394 1128 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Olfr806Q8VFI2 313 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cryl1Q99KP3 319 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ifrd2Q9D8U0 441 aa22.32■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Mageb4A2A9R3 556 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Mup18A2BIM8 181 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Grpel2O88396 224 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Mup11P04938 181 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Eno3P21550 434 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 LynP25911 512 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 HdxQ14B70 692 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Arhgap17Q3UIA2 846 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gm21320Q4FZE8 181 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 MarcoQ60754 518 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Slc6a3Q61327 619 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gm42417Q8K1D0 126 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Serpinb10Q8K1K6 397 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Sohlh2Q9D489 467 aa22.31■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Nlrp12E9Q5R7 1054 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Matn2O08746 956 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Agtr2P35374 363 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Hsd11b2P51661 386 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ppp2r1bQ7TNP2 601 aaKnown RBP22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Kirrel2Q7TSU7 700 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 TtpaQ8BWP5 278 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 4932414N04RikQ8CEQ9 752 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 C1raQ8CG16 707 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Clip4Q8CI96 704 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Rnf31Q924T7 1066 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 ArhgdiaQ99PT1 204 aaKnown RBP22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Clca1Q9D7Z6 913 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 PrepQ9QUR6 710 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gpc1Q9QZF2 557 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Fam83cA2ARK0 776 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Apol11bE9PUZ0 337 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Csf2rb2P26954 878 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Nckap1P28660 1128 aaKnown RBP22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Polr1bP70700 1135 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Rnf220Q6PDX6 566 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Slc39a14Q75N73 489 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Kirrel1Q80W68 789 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Q8BGK9 164 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Tgm6Q8BM11 706 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Kcns3Q8BQZ8 491 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Nudt13Q8JZU0 352 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Olfr357Q8VFP4 308 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Coro6Q920M5 471 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Chit1Q9D7Q1 464 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Trpc4apQ9JLV2 797 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Apobec2Q9WV35 224 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Cacna1cQ01815 2139 aa22.3■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gm45233A0A0N4SVE0 221 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Ssxb6A2BI74 170 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 FanceB8JJD6 213 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Gm28043E0CXC2 719 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 AmacrO09174 381 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Dsg2O55111 1122 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 HmbsP22907 361 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Apcdd1Q3U128 514 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Pag1Q3U1F9 429 aa22.29■■□□□ 1.16
Upf3a-201ENSMUST00000043767 Pnliprp1Q5BKQ4 473 aa22.29■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms