RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	ACA1	P39970	489 aa		4.15	□□□□□ -1.75
APL4	YPR029C	MRPS18	P42847	217 aa		4.15	□□□□□ -1.75
APL4	YPR029C	FYV8	P46949	817 aa	Known RBP	4.15	□□□□□ -1.75
APL4	YPR029C	ERP6	P53198	216 aa		4.15	□□□□□ -1.75
APL4	YPR029C	SNP1	Q00916	300 aa	Predicted RBP	4.15	□□□□□ -1.75
APL4	YPR029C	SMF3	Q12078	473 aa	Predicted RBP	4.15	□□□□□ -1.75
APL4	YPR029C	MCD1	Q12158	566 aa		4.15	□□□□□ -1.75
APL4	YPR029C	RRG1	Q12167	365 aa	Predicted RBP	4.15	□□□□□ -1.75
APL4	YPR029C	YLL054C	Q12244	843 aa		4.15	□□□□□ -1.75
APL4	YPR029C	HXK1	P04806	485 aa	Known RBP	4.14	□□□□□ -1.75
APL4	YPR029C	APA1	P16550	321 aa	Known RBP	4.14	□□□□□ -1.75
APL4	YPR029C	SRO9	P25567	434 aa	Known RBP	4.14	□□□□□ -1.75
APL4	YPR029C	CDC48	P25694	835 aa	Known RBP	4.14	□□□□□ -1.75
APL4	YPR029C	DAL1	P32375	460 aa		4.14	□□□□□ -1.75
APL4	YPR029C	ISF1	P32488	338 aa		4.14	□□□□□ -1.75
APL4	YPR029C	RIB7	P33312	244 aa		4.14	□□□□□ -1.75
APL4	YPR029C	PBY1	P38254	753 aa		4.14	□□□□□ -1.75
APL4	YPR029C	SPC72	P39723	622 aa		4.14	□□□□□ -1.75
APL4	YPR029C	YJR115W	P47152	169 aa		4.14	□□□□□ -1.75
APL4	YPR029C	ENT3	P47160	408 aa		4.14	□□□□□ -1.75
APL4	YPR029C	TSC13	Q99190	310 aa		4.14	□□□□□ -1.75
APL4	YPR029C	YMR084W	A2P2R3	262 aa		4.14	□□□□□ -1.75
APL4	YPR029C	PRT1	P06103	763 aa	Known RBP	4.14	□□□□□ -1.75
APL4	YPR029C	SEC2	P17065	759 aa		4.14	□□□□□ -1.75
APL4	YPR029C	KAR3	P17119	729 aa		4.14	□□□□□ -1.75
APL4	YPR029C	BDF1	P35817	686 aa		4.14	□□□□□ -1.75
APL4	YPR029C	BAP2	P38084	609 aa		4.14	□□□□□ -1.75
APL4	YPR029C	UBS1	P38290	277 aa		4.14	□□□□□ -1.75
APL4	YPR029C	HSM3	P38348	480 aa		4.14	□□□□□ -1.75
APL4	YPR029C	YHR131C	P38835	850 aa		4.14	□□□□□ -1.75
APL4	YPR029C	GPP2	P40106	250 aa	Known RBP	4.14	□□□□□ -1.75
APL4	YPR029C	HIS6	P40545	261 aa		4.14	□□□□□ -1.75
APL4	YPR029C	GCD10	P41814	478 aa		4.14	□□□□□ -1.75
APL4	YPR029C	HSV2	P50079	448 aa	Predicted RBP	4.14	□□□□□ -1.75
APL4	YPR029C	MEP3	P53390	489 aa		4.14	□□□□□ -1.75
APL4	YPR029C	SPO1	P53541	631 aa		4.14	□□□□□ -1.75
APL4	YPR029C	SEC5	P89102	971 aa		4.14	□□□□□ -1.75
APL4	YPR029C	RRP36	Q12481	300 aa	Predicted RBP	4.14	□□□□□ -1.75
APL4	YPR029C	BAS1	P22035	811 aa		4.13	□□□□□ -1.75
APL4	YPR029C	MSH3	P25336	1018 aa		4.13	□□□□□ -1.75
APL4	YPR029C	ARE1	P25628	610 aa		4.13	□□□□□ -1.75
APL4	YPR029C	LYP1	P32487	611 aa		4.13	□□□□□ -1.75
APL4	YPR029C	RPN2	P32565	945 aa	Known RBP	4.13	□□□□□ -1.75
APL4	YPR029C	ATG19	P35193	415 aa		4.13	□□□□□ -1.75
APL4	YPR029C	TYS1	P36421	394 aa	Known RBP	4.13	□□□□□ -1.75
APL4	YPR029C	KTR4	P38131	464 aa		4.13	□□□□□ -1.75
APL4	YPR029C	SPO74	P45819	413 aa		4.13	□□□□□ -1.75
APL4	YPR029C	CWH41	P53008	833 aa		4.13	□□□□□ -1.75
APL4	YPR029C	RBG2	P53295	368 aa	Known RBP	4.13	□□□□□ -1.75
APL4	YPR029C	ALF1	P53904	254 aa		4.13	□□□□□ -1.75
APL4	YPR029C	FMP25	Q08023	583 aa		4.13	□□□□□ -1.75
APL4	YPR029C	RPB2	P08518	1224 aa	Known RBP	4.13	□□□□□ -1.75
APL4	YPR029C	RET1	P22276	1149 aa	Known RBP	4.13	□□□□□ -1.75
APL4	YPR029C	NTG1	P31378	399 aa		4.13	□□□□□ -1.75
APL4	YPR029C	DBF4	P32325	704 aa		4.13	□□□□□ -1.75
APL4	YPR029C	DHR2	P36009	735 aa	Predicted RBP	4.13	□□□□□ -1.75
APL4	YPR029C	REI1	P38344	393 aa	Predicted RBP	4.13	□□□□□ -1.75
APL4	YPR029C	PEX18	P38855	283 aa		4.13	□□□□□ -1.75
APL4	YPR029C	TOK1	P40310	691 aa		4.13	□□□□□ -1.75
APL4	YPR029C	GYP7	P48365	746 aa		4.13	□□□□□ -1.75
APL4	YPR029C	RNR4	P49723	345 aa	Known RBP	4.13	□□□□□ -1.75
APL4	YPR029C	VPS4	P52917	437 aa		4.13	□□□□□ -1.75
APL4	YPR029C	YGR273C	P53329	174 aa		4.13	□□□□□ -1.75
APL4	YPR029C	MRPL19	P53875	158 aa		4.13	□□□□□ -1.75
APL4	YPR029C	CDC55	Q00362	526 aa		4.13	□□□□□ -1.75
APL4	YPR029C	EAF1	Q06337	982 aa		4.13	□□□□□ -1.75
APL4	YPR029C	MLH2	Q07980	695 aa		4.13	□□□□□ -1.75
APL4	YPR029C	APL4	Q12028	832 aa		4.13	□□□□□ -1.75
APL4	YPR029C	ENT1	Q12518	454 aa		4.13	□□□□□ -1.75
APL4	YPR029C	HOM2	P13663	365 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	SLY41	P22215	453 aa		4.12	□□□□□ -1.75
APL4	YPR029C	PRE9	P23638	258 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	DBP1	P24784	617 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	BUD31	P25337	157 aa	Predicted RBP	4.12	□□□□□ -1.75
APL4	YPR029C	CMK1	P27466	446 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	FUN30	P31380	1131 aa		4.12	□□□□□ -1.75
APL4	YPR029C	PET309	P32522	965 aa	Predicted RBP	4.12	□□□□□ -1.75
APL4	YPR029C	ORC2	P32833	620 aa		4.12	□□□□□ -1.75
APL4	YPR029C	YER034W	P40022	185 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	PSY2	P40164	858 aa		4.12	□□□□□ -1.75
APL4	YPR029C	ATH1	P48016	1211 aa		4.12	□□□□□ -1.75
APL4	YPR029C	MNP1	P53163	194 aa	Predicted RBP	4.12	□□□□□ -1.75
APL4	YPR029C	VPS9	P54787	451 aa		4.12	□□□□□ -1.75
APL4	YPR029C	CTR9	P89105	1077 aa		4.12	□□□□□ -1.75
APL4	YPR029C	GTR1	Q00582	310 aa		4.12	□□□□□ -1.75
APL4	YPR029C	TRS130	Q03660	1102 aa		4.12	□□□□□ -1.75
APL4	YPR029C	GSF2	Q04697	403 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	LCB5	Q06147	687 aa	Known RBP	4.12	□□□□□ -1.75
APL4	YPR029C	BDS1	Q08347	646 aa		4.12	□□□□□ -1.75
APL4	YPR029C	REX3	Q12090	404 aa		4.12	□□□□□ -1.75
APL4	YPR029C	TAH18	Q12181	623 aa		4.12	□□□□□ -1.75
APL4	YPR029C	SSM4	P40318	1319 aa		4.12	□□□□□ -1.75
APL4	YPR029C	MRP8	P35719	219 aa		4.12	□□□□□ -1.75
APL4	YPR029C	FTH1	P38310	465 aa		4.12	□□□□□ -1.75
APL4	YPR029C	RAD26	P40352	1085 aa		4.12	□□□□□ -1.75
APL4	YPR029C	ISM1	P48526	1002 aa		4.12	□□□□□ -1.75
APL4	YPR029C	GUP1	P53154	560 aa		4.12	□□□□□ -1.75
APL4	YPR029C	CAF120	P53836	1060 aa		4.12	□□□□□ -1.75
APL4	YPR029C	UBP10	P53874	792 aa	Predicted RBP	4.12	□□□□□ -1.75
APL4	YPR029C	TAF8	Q03750	510 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms