RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YJL181WP46987 611 aa2.87□□□□□ -1.95
VPS16YPL045W DAS1P47005 663 aa2.87□□□□□ -1.95
VPS16YPL045W COG6P53959 839 aa2.87□□□□□ -1.95
VPS16YPL045W TGL2P54857 326 aa2.87□□□□□ -1.95
VPS16YPL045W UTP5Q04177 643 aaKnown RBP2.87□□□□□ -1.95
VPS16YPL045W SWR1Q05471 1514 aa2.87□□□□□ -1.95
VPS16YPL045W ATP4P05626 244 aa2.87□□□□□ -1.95
VPS16YPL045W AMS1P22855 1083 aa2.87□□□□□ -1.95
VPS16YPL045W VBA3P25594 458 aa2.87□□□□□ -1.95
VPS16YPL045W EUG1P32474 517 aa2.87□□□□□ -1.95
VPS16YPL045W HIR1P32479 840 aa2.87□□□□□ -1.95
VPS16YPL045W BAP2P38084 609 aa2.87□□□□□ -1.95
VPS16YPL045W MCM7P38132 845 aa2.87□□□□□ -1.95
VPS16YPL045W MPH1P40562 993 aa2.87□□□□□ -1.95
VPS16YPL045W UBP6P43593 499 aaKnown RBP2.87□□□□□ -1.95
VPS16YPL045W PTK2P47116 818 aaKnown RBP2.87□□□□□ -1.95
VPS16YPL045W YJR098CP47139 656 aa2.87□□□□□ -1.95
VPS16YPL045W UBP15P50101 1230 aa2.87□□□□□ -1.95
VPS16YPL045W RSC2Q06488 889 aa2.87□□□□□ -1.95
VPS16YPL045W TYS1P36421 394 aaKnown RBP2.86□□□□□ -1.95
VPS16YPL045W NEM1P38757 446 aa2.86□□□□□ -1.95
VPS16YPL045W BOI2P39969 1040 aa2.86□□□□□ -1.95
VPS16YPL045W MGS1P40151 587 aa2.86□□□□□ -1.95
VPS16YPL045W AIR1P40507 360 aaKnown RBP2.86□□□□□ -1.95
VPS16YPL045W GPP1P41277 250 aaKnown RBP2.86□□□□□ -1.95
VPS16YPL045W SLS1P42900 643 aa2.86□□□□□ -1.95
VPS16YPL045W LSB6P42951 607 aa2.86□□□□□ -1.95
VPS16YPL045W HST3P53687 447 aa2.86□□□□□ -1.95
VPS16YPL045W SVL3Q03088 825 aaKnown RBP2.86□□□□□ -1.95
VPS16YPL045W NYV1Q12255 253 aa2.86□□□□□ -1.95
VPS16YPL045W MSD1P15179 658 aaKnown RBP2.86□□□□□ -1.95
VPS16YPL045W AFG2P32794 780 aa2.86□□□□□ -1.95
VPS16YPL045W DOM34P33309 386 aa2.86□□□□□ -1.95
VPS16YPL045W PEX14P53112 341 aa2.86□□□□□ -1.95
VPS16YPL045W YGR021WP53212 290 aa2.86□□□□□ -1.95
VPS16YPL045W ATG16Q03818 150 aa2.86□□□□□ -1.95
VPS16YPL045W PIF1P07271 859 aa2.85□□□□□ -1.95
VPS16YPL045W CDC4P07834 779 aa2.85□□□□□ -1.95
VPS16YPL045W RAD53P22216 821 aa2.85□□□□□ -1.95
VPS16YPL045W MLS1P30952 554 aa2.85□□□□□ -1.95
VPS16YPL045W PET10P36139 283 aa2.85□□□□□ -1.95
VPS16YPL045W XDJ1P39102 459 aa2.85□□□□□ -1.95
VPS16YPL045W IES5P40060 125 aa2.85□□□□□ -1.95
VPS16YPL045W FET4P40988 552 aa2.85□□□□□ -1.95
VPS16YPL045W VMS1Q04311 632 aaKnown RBP2.85□□□□□ -1.95
VPS16YPL045W URN1Q06525 465 aaKnown RBP2.85□□□□□ -1.95
VPS16YPL045W YDR306CQ06640 478 aa2.85□□□□□ -1.95
VPS16YPL045W YPR071WQ12346 211 aa2.85□□□□□ -1.95
VPS16YPL045W MRP10O75012 95 aa2.85□□□□□ -1.95
VPS16YPL045W PHR1P05066 565 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
VPS16YPL045W SRD1P09007 221 aa2.85□□□□□ -1.95
VPS16YPL045W RPA135P22138 1203 aaKnown RBP2.85□□□□□ -1.95
VPS16YPL045W GSY1P23337 708 aa2.85□□□□□ -1.95
VPS16YPL045W AAR2P32357 355 aaPredicted RBP2.85□□□□□ -1.95
VPS16YPL045W PLC1P32383 869 aa2.85□□□□□ -1.95
VPS16YPL045W ALG3P38179 458 aa2.85□□□□□ -1.95
VPS16YPL045W SIT1P39980 628 aa2.85□□□□□ -1.95
VPS16YPL045W PEA2P40091 420 aa2.85□□□□□ -1.95
VPS16YPL045W GUS1P46655 708 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
VPS16YPL045W HNT2P49775 206 aa2.85□□□□□ -1.95
VPS16YPL045W UTP22P53254 1237 aaPredicted RBP2.85□□□□□ -1.95
VPS16YPL045W YNL034WP53963 612 aa2.85□□□□□ -1.95
VPS16YPL045W YNL018CP53976 612 aa2.85□□□□□ -1.95
VPS16YPL045W MTQ2Q03920 221 aaPredicted RBP2.85□□□□□ -1.95
VPS16YPL045W RKM2Q03942 479 aa2.85□□□□□ -1.95
VPS16YPL045W HFD1Q04458 532 aa2.85□□□□□ -1.95
VPS16YPL045W TMA64Q04600 565 aaKnown RBP2.85□□□□□ -1.95
VPS16YPL045W SOG2Q08817 791 aa2.85□□□□□ -1.95
VPS16YPL045W YIG1Q08956 461 aa2.85□□□□□ -1.95
VPS16YPL045W NKP1Q12493 238 aa2.85□□□□□ -1.95
VPS16YPL045W MPD2Q99316 277 aa2.85□□□□□ -1.95
VPS16YPL045W DPS1P04802 557 aaKnown RBP2.84□□□□□ -1.95
VPS16YPL045W CDC9P04819 755 aa2.84□□□□□ -1.95
VPS16YPL045W RPP1AP05318 106 aaPredicted RBP2.84□□□□□ -1.95
VPS16YPL045W YEF3P16521 1044 aaKnown RBP2.84□□□□□ -1.95
VPS16YPL045W PCL2P25693 308 aa2.84□□□□□ -1.95
VPS16YPL045W DPB3P27344 201 aa2.84□□□□□ -1.95
VPS16YPL045W MSC7P38694 644 aa2.84□□□□□ -1.95
VPS16YPL045W SAH1P39954 449 aaKnown RBP2.84□□□□□ -1.95
VPS16YPL045W ALG2P43636 503 aa2.84□□□□□ -1.95
VPS16YPL045W NUP85P46673 744 aa2.84□□□□□ -1.95
VPS16YPL045W MET13P53128 600 aa2.84□□□□□ -1.95
VPS16YPL045W LSC2P53312 427 aa2.84□□□□□ -1.95
VPS16YPL045W YNR063WP53749 607 aa2.84□□□□□ -1.95
VPS16YPL045W HEH2Q03281 663 aa2.84□□□□□ -1.95
VPS16YPL045W SPO71Q03868 1245 aa2.84□□□□□ -1.95
VPS16YPL045W TCB1Q12466 1186 aa2.84□□□□□ -1.95
VPS16YPL045W SST2P11972 698 aaKnown RBP2.83□□□□□ -1.96
VPS16YPL045W RGD1P38339 666 aa2.83□□□□□ -1.96
VPS16YPL045W ERP2P39704 215 aa2.83□□□□□ -1.96
VPS16YPL045W HAS1Q03532 505 aaKnown RBP2.83□□□□□ -1.96
VPS16YPL045W TRE2Q08693 809 aa2.83□□□□□ -1.96
VPS16YPL045W GNT1Q12096 491 aa2.83□□□□□ -1.96
VPS16YPL045W CDC19P00549 500 aaKnown RBP2.83□□□□□ -1.96
VPS16YPL045W RAD18P10862 487 aa2.83□□□□□ -1.96
VPS16YPL045W TFC4P33339 1025 aa2.83□□□□□ -1.96
VPS16YPL045W ARL1P38116 183 aaKnown RBP2.83□□□□□ -1.96
VPS16YPL045W BUL2Q03758 920 aaKnown RBP2.83□□□□□ -1.96
VPS16YPL045W PTC5Q12511 572 aa2.83□□□□□ -1.96
VPS16YPL045W SFL1P20134 766 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms