RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W PTC5Q12511 572 aa4.56□□□□□ -1.68
SWM2YNR004W PMA1P05030 918 aaKnown RBP4.55□□□□□ -1.68
SWM2YNR004W TRL1P09880 827 aaKnown RBP4.55□□□□□ -1.68
SWM2YNR004W KAR2P16474 682 aaKnown RBP4.55□□□□□ -1.68
SWM2YNR004W SNF5P18480 905 aa4.55□□□□□ -1.68
SWM2YNR004W RDH54P38086 958 aa4.55□□□□□ -1.68
SWM2YNR004W ULP1Q02724 621 aa4.55□□□□□ -1.68
SWM2YNR004W AFG2P32794 780 aa4.54□□□□□ -1.68
SWM2YNR004W GTF1P53260 183 aaPredicted RBP4.54□□□□□ -1.68
SWM2YNR004W YLR224WQ05947 369 aa4.54□□□□□ -1.68
SWM2YNR004W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
SWM2YNR004W MSS4P38994 779 aa4.53□□□□□ -1.68
SWM2YNR004W RPN3P40016 523 aaKnown RBP4.53□□□□□ -1.68
SWM2YNR004W VPS62P53285 467 aa4.53□□□□□ -1.68
SWM2YNR004W EST2Q06163 884 aa4.53□□□□□ -1.68
SWM2YNR004W NUT2Q06213 157 aa4.53□□□□□ -1.68
SWM2YNR004W RIB2Q12362 591 aaKnown RBP4.53□□□□□ -1.68
SWM2YNR004W KIN2P13186 1147 aaKnown RBP4.52□□□□□ -1.69
SWM2YNR004W DEF1P35732 738 aaKnown RBP4.52□□□□□ -1.69
SWM2YNR004W ALG3P38179 458 aa4.52□□□□□ -1.69
SWM2YNR004W YGL140CP53120 1219 aa4.52□□□□□ -1.69
SWM2YNR004W DAL4Q04895 635 aa4.52□□□□□ -1.69
SWM2YNR004W PPM2Q08282 695 aa4.52□□□□□ -1.69
SWM2YNR004W DED1P06634 604 aaKnown RBP4.51□□□□□ -1.69
SWM2YNR004W DCG1P32460 244 aa4.51□□□□□ -1.69
SWM2YNR004W MDJ2P42834 146 aa4.51□□□□□ -1.69
SWM2YNR004W EMC1P25574 760 aa4.5□□□□□ -1.69
SWM2YNR004W ERP5P38819 212 aa4.5□□□□□ -1.69
SWM2YNR004W YPL260WQ08977 551 aa4.5□□□□□ -1.69
SWM2YNR004W HMI1Q12039 706 aa4.5□□□□□ -1.69
SWM2YNR004W HEM13P11353 328 aaKnown RBP4.49□□□□□ -1.69
SWM2YNR004W APL1P27351 700 aa4.49□□□□□ -1.69
SWM2YNR004W GCV2P49095 1034 aa4.49□□□□□ -1.69
SWM2YNR004W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
SWM2YNR004W SVS1Q12254 260 aa4.49□□□□□ -1.69
SWM2YNR004W RLF2Q12495 606 aa4.49□□□□□ -1.69
SWM2YNR004W GCD6P32501 712 aaKnown RBP4.48□□□□□ -1.69
SWM2YNR004W OAR1P35731 278 aa4.48□□□□□ -1.69
SWM2YNR004W UBA2P52488 636 aa4.48□□□□□ -1.69
SWM2YNR004W NOP12Q08208 459 aaKnown RBP4.48□□□□□ -1.69
SWM2YNR004W SEC23P15303 768 aaKnown RBP4.47□□□□□ -1.69
SWM2YNR004W MOH1P38191 138 aa4.47□□□□□ -1.69
SWM2YNR004W YFL054CP43549 646 aa4.47□□□□□ -1.69
SWM2YNR004W YBL113CQ7M4S9 792 aa4.47□□□□□ -1.69
SWM2YNR004W SIZ1Q04195 904 aa4.46□□□□□ -1.7
SWM2YNR004W VPS35P34110 944 aa4.45□□□□□ -1.7
SWM2YNR004W DAK2P43550 591 aa4.45□□□□□ -1.7
SWM2YNR004W ADI1Q03677 179 aa4.45□□□□□ -1.7
SWM2YNR004W PLB1P39105 664 aa4.44□□□□□ -1.7
SWM2YNR004W SNM1P40993 198 aa4.44□□□□□ -1.7
SWM2YNR004W ATF1P40353 525 aa4.43□□□□□ -1.7
SWM2YNR004W IOC3P43596 787 aa4.43□□□□□ -1.7
SWM2YNR004W YPL109CQ02981 657 aa4.43□□□□□ -1.7
SWM2YNR004W AIM39Q08223 395 aa4.43□□□□□ -1.7
SWM2YNR004W HRR25P29295 494 aaKnown RBP4.42□□□□□ -1.7
SWM2YNR004W SIP5P40210 489 aaKnown RBP4.42□□□□□ -1.7
SWM2YNR004W OXR1Q08952 273 aa4.42□□□□□ -1.7
SWM2YNR004W RAT1Q02792 1006 aaKnown RBP4.41□□□□□ -1.7
SWM2YNR004W MSC2Q03455 724 aa4.41□□□□□ -1.7
SWM2YNR004W BDF2Q07442 638 aa4.41□□□□□ -1.7
SWM2YNR004W PHO4P07270 312 aaKnown RBP4.4□□□□□ -1.71
SWM2YNR004W PFK1P16861 987 aaKnown RBP4.4□□□□□ -1.71
SWM2YNR004W TOS4Q06266 489 aa4.4□□□□□ -1.71
SWM2YNR004W CDC3P32457 520 aaKnown RBP4.39□□□□□ -1.71
SWM2YNR004W PEP7P32609 515 aa4.39□□□□□ -1.71
SWM2YNR004W YER152CP10356 443 aa4.38□□□□□ -1.71
SWM2YNR004W TAF13P11747 167 aa4.38□□□□□ -1.71
SWM2YNR004W FAA3P39002 694 aa4.38□□□□□ -1.71
SWM2YNR004W MND2P40577 368 aa4.38□□□□□ -1.71
SWM2YNR004W LGE1Q02796 332 aaKnown RBP4.38□□□□□ -1.71
SWM2YNR004W ATG13Q06628 738 aa4.38□□□□□ -1.71
SWM2YNR004W POA1P38218 177 aa4.37□□□□□ -1.71
SWM2YNR004W RGD1P38339 666 aa4.37□□□□□ -1.71
SWM2YNR004W PIC2P40035 300 aa4.37□□□□□ -1.71
SWM2YNR004W ROD1Q02805 837 aa4.37□□□□□ -1.71
SWM2YNR004W TPO1Q07824 586 aa4.37□□□□□ -1.71
SWM2YNR004W HAT1Q12341 374 aa4.37□□□□□ -1.71
SWM2YNR004W BAS1P22035 811 aa4.36□□□□□ -1.71
SWM2YNR004W MET12P46151 657 aa4.36□□□□□ -1.71
SWM2YNR004W EXG2P52911 562 aa4.36□□□□□ -1.71
SWM2YNR004W ACE2P21192 770 aa4.35□□□□□ -1.71
SWM2YNR004W MKK2P32491 506 aa4.35□□□□□ -1.71
SWM2YNR004W YHL050CP38721 697 aa4.35□□□□□ -1.71
SWM2YNR004W YHR219WP38900 624 aa4.35□□□□□ -1.71
SWM2YNR004W STU2P46675 888 aa4.35□□□□□ -1.71
SWM2YNR004W ADY3Q07732 790 aa4.35□□□□□ -1.71
SWM2YNR004W HIS5P07172 385 aa4.34□□□□□ -1.71
SWM2YNR004W RPP2AP05319 106 aaKnown RBP4.33□□□□□ -1.72
SWM2YNR004W SSA1P10591 642 aaKnown RBP4.33□□□□□ -1.72
SWM2YNR004W ENA1P13587 1091 aa4.33□□□□□ -1.72
SWM2YNR004W MLS1P30952 554 aa4.33□□□□□ -1.72
SWM2YNR004W CUE2P36075 443 aaKnown RBP4.33□□□□□ -1.72
SWM2YNR004W ZRG8P40021 1076 aa4.33□□□□□ -1.72
SWM2YNR004W SIW14P53965 281 aa4.33□□□□□ -1.72
SWM2YNR004W ENA2Q01896 1091 aa4.33□□□□□ -1.72
SWM2YNR004W ENA5Q12691 1091 aa4.33□□□□□ -1.72
SWM2YNR004W UGA2P38067 497 aa4.32□□□□□ -1.72
SWM2YNR004W QRI1P43123 477 aaKnown RBP4.32□□□□□ -1.72
SWM2YNR004W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SWM2YNR004W HXK1P04806 485 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms