RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W MEC3Q02574 474 aa5.92□□□□□ -1.46
SIR1YKR101W YLR001CQ07895 862 aa5.92□□□□□ -1.46
SIR1YKR101W MSD1P15179 658 aaKnown RBP5.91□□□□□ -1.46
SIR1YKR101W ARL1P38116 183 aaKnown RBP5.91□□□□□ -1.46
SIR1YKR101W HNT2P49775 206 aa5.91□□□□□ -1.46
SIR1YKR101W YGR237CP50089 785 aa5.91□□□□□ -1.46
SIR1YKR101W SCW11P53189 542 aa5.91□□□□□ -1.46
SIR1YKR101W ADE12P80210 433 aaKnown RBP5.91□□□□□ -1.46
SIR1YKR101W TOM70P07213 617 aaKnown RBP5.91□□□□□ -1.46
SIR1YKR101W GRX7P38068 203 aa5.91□□□□□ -1.46
SIR1YKR101W RGD1P38339 666 aa5.91□□□□□ -1.46
SIR1YKR101W SEC26P41810 973 aaKnown RBP5.91□□□□□ -1.46
SIR1YKR101W UBP6P43593 499 aaKnown RBP5.91□□□□□ -1.46
SIR1YKR101W ROG3P43602 733 aa5.91□□□□□ -1.46
SIR1YKR101W GUS1P46655 708 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SIR1YKR101W HLJ1P48353 224 aa5.91□□□□□ -1.46
SIR1YKR101W TY1A-MR1Q04215 440 aa5.91□□□□□ -1.46
SIR1YKR101W YLR346CQ06139 101 aa5.91□□□□□ -1.46
SIR1YKR101W YDR306CQ06640 478 aa5.91□□□□□ -1.46
SIR1YKR101W GNT1Q12096 491 aa5.91□□□□□ -1.46
SIR1YKR101W PTC5Q12511 572 aa5.91□□□□□ -1.46
SIR1YKR101W DBP2P24783 546 aaKnown RBP5.9□□□□□ -1.46
SIR1YKR101W MRC1P25588 1096 aa5.9□□□□□ -1.46
SIR1YKR101W PMC1P38929 1173 aaPredicted RBP5.9□□□□□ -1.46
SIR1YKR101W ALG6Q12001 544 aaKnown RBP5.9□□□□□ -1.46
SIR1YKR101W YPR071WQ12346 211 aa5.9□□□□□ -1.46
SIR1YKR101W TMA17Q12513 150 aa5.9□□□□□ -1.46
SIR1YKR101W YDR461C-AQ2V2P7 80 aa5.9□□□□□ -1.46
SIR1YKR101W REI1P38344 393 aaPredicted RBP5.89□□□□□ -1.47
SIR1YKR101W POL5P39985 1022 aaKnown RBP5.89□□□□□ -1.47
SIR1YKR101W GCV1P48015 400 aa5.89□□□□□ -1.47
SIR1YKR101W LYS5P50113 272 aa5.89□□□□□ -1.47
SIR1YKR101W PEX8P53248 589 aa5.89□□□□□ -1.47
SIR1YKR101W SPO71Q03868 1245 aa5.89□□□□□ -1.47
SIR1YKR101W THI73Q07904 523 aa5.89□□□□□ -1.47
SIR1YKR101W YER152CP10356 443 aa5.89□□□□□ -1.47
SIR1YKR101W PET10P36139 283 aa5.89□□□□□ -1.47
SIR1YKR101W ERT1P38140 529 aa5.89□□□□□ -1.47
SIR1YKR101W GEM1P39722 662 aa5.89□□□□□ -1.47
SIR1YKR101W SNF7P39929 240 aaKnown RBP5.89□□□□□ -1.47
SIR1YKR101W VBA3P25594 458 aa5.88□□□□□ -1.47
SIR1YKR101W AFR1P33304 620 aa5.88□□□□□ -1.47
SIR1YKR101W PNT1P38969 423 aa5.88□□□□□ -1.47
SIR1YKR101W DSS1P39112 969 aa5.88□□□□□ -1.47
SIR1YKR101W GIP2P40036 548 aa5.88□□□□□ -1.47
SIR1YKR101W LEM3P42838 414 aa5.88□□□□□ -1.47
SIR1YKR101W BUL2Q03758 920 aaKnown RBP5.88□□□□□ -1.47
SIR1YKR101W SYT1Q06836 1226 aa5.88□□□□□ -1.47
SIR1YKR101W CDC11P32458 415 aa5.87□□□□□ -1.47
SIR1YKR101W YAR028WP39548 234 aa5.87□□□□□ -1.47
SIR1YKR101W SIT1P39980 628 aa5.87□□□□□ -1.47
SIR1YKR101W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SIR1YKR101W ERS1P17261 260 aa5.87□□□□□ -1.47
SIR1YKR101W NAR1P23503 491 aaKnown RBP5.87□□□□□ -1.47
SIR1YKR101W SEC6P32844 805 aa5.87□□□□□ -1.47
SIR1YKR101W TED1P40533 473 aa5.87□□□□□ -1.47
SIR1YKR101W ALO1P54783 526 aaKnown RBP5.87□□□□□ -1.47
SIR1YKR101W UME1Q03010 460 aa5.87□□□□□ -1.47
SIR1YKR101W RPL11AP0C0W9 174 aaKnown RBP5.86□□□□□ -1.47
SIR1YKR101W AAR2P32357 355 aaPredicted RBP5.86□□□□□ -1.47
SIR1YKR101W DOM34P33309 386 aa5.86□□□□□ -1.47
SIR1YKR101W PMT3P47190 753 aa5.86□□□□□ -1.47
SIR1YKR101W YGR045CP53229 120 aa5.86□□□□□ -1.47
SIR1YKR101W DUS3Q06053 668 aaKnown RBP5.86□□□□□ -1.47
SIR1YKR101W SPP382Q06411 708 aaPredicted RBP5.86□□□□□ -1.47
SIR1YKR101W RPL11BQ3E757 174 aaPredicted RBP5.86□□□□□ -1.47
SIR1YKR101W NUP145P49687 1317 aa5.86□□□□□ -1.47
SIR1YKR101W TRK1P12685 1235 aa5.86□□□□□ -1.47
SIR1YKR101W RAD53P22216 821 aa5.86□□□□□ -1.47
SIR1YKR101W ATG14P38270 344 aa5.86□□□□□ -1.47
SIR1YKR101W MXR1P40029 184 aa5.86□□□□□ -1.47
SIR1YKR101W BRE2P43132 505 aa5.86□□□□□ -1.47
SIR1YKR101W CDC9P04819 755 aa5.85□□□□□ -1.47
SIR1YKR101W SDA1P53313 767 aaKnown RBP5.85□□□□□ -1.47
SIR1YKR101W GIS4Q04233 774 aa5.85□□□□□ -1.47
SIR1YKR101W QNS1P38795 714 aaKnown RBP5.84□□□□□ -1.47
SIR1YKR101W ALG2P43636 503 aa5.84□□□□□ -1.47
SIR1YKR101W TY4A-JP47023 414 aa5.84□□□□□ -1.47
SIR1YKR101W NCE103P53615 221 aa5.84□□□□□ -1.47
SIR1YKR101W PHR1P05066 565 aaKnown RBP RIP-Chip data5.84□□□□□ -1.48not detected
SIR1YKR101W NFS1P25374 497 aa5.84□□□□□ -1.48
SIR1YKR101W KIP1P28742 1111 aa5.84□□□□□ -1.48
SIR1YKR101W MGS1P40151 587 aa5.84□□□□□ -1.48
SIR1YKR101W NOP2P40991 618 aaKnown RBP5.84□□□□□ -1.48
SIR1YKR101W ELA1P53861 379 aaPredicted RBP5.84□□□□□ -1.48
SIR1YKR101W SRC1Q03707 834 aa5.84□□□□□ -1.48
SIR1YKR101W RSA3Q05942 220 aaKnown RBP5.84□□□□□ -1.48
SIR1YKR101W BUD21Q08492 214 aaPredicted RBP5.84□□□□□ -1.48
SIR1YKR101W LAP2Q10740 671 aa5.84□□□□□ -1.48
SIR1YKR101W ELG1Q12050 791 aa5.84□□□□□ -1.48
SIR1YKR101W SRD1P09007 221 aa5.83□□□□□ -1.48
SIR1YKR101W PDC5P16467 563 aaKnown RBP5.83□□□□□ -1.48
SIR1YKR101W NPP1P25353 742 aa5.83□□□□□ -1.48
SIR1YKR101W PPH3P32345 308 aa5.83□□□□□ -1.48
SIR1YKR101W YKL151CP36059 337 aa5.83□□□□□ -1.48
SIR1YKR101W GPB2P39717 880 aa5.83□□□□□ -1.48
SIR1YKR101W SAH1P39954 449 aaKnown RBP5.83□□□□□ -1.48
SIR1YKR101W NIT1P40447 199 aa5.83□□□□□ -1.48
SIR1YKR101W GPP1P41277 250 aaKnown RBP5.83□□□□□ -1.48
SIR1YKR101W VPS53P47061 822 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms