RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C GPB2P39717 880 aa5.27□□□□□ -1.57
YPT52YKR014C RPN3P40016 523 aaKnown RBP5.27□□□□□ -1.57
YPT52YKR014C HNT2P49775 206 aa5.27□□□□□ -1.57
YPT52YKR014C JIP5Q06214 492 aaPredicted RBP5.27□□□□□ -1.57
YPT52YKR014C MLS1P30952 554 aa5.26□□□□□ -1.57
YPT52YKR014C AIM26P32858 118 aa5.26□□□□□ -1.57
YPT52YKR014C MCM7P38132 845 aa5.26□□□□□ -1.57
YPT52YKR014C SNF7P39929 240 aaKnown RBP5.26□□□□□ -1.57
YPT52YKR014C ECL1P48235 211 aa5.26□□□□□ -1.57
YPT52YKR014C CWC24P53769 259 aa5.26□□□□□ -1.57
YPT52YKR014C ORC3P54790 616 aa5.26□□□□□ -1.57
YPT52YKR014C LYP1P32487 611 aa5.25□□□□□ -1.57
YPT52YKR014C MET10P39692 1035 aa5.25□□□□□ -1.57
YPT52YKR014C AVT1P47082 602 aa5.25□□□□□ -1.57
YPT52YKR014C TYW3P53177 273 aa5.25□□□□□ -1.57
YPT52YKR014C SPO20Q04359 397 aa5.25□□□□□ -1.57
YPT52YKR014C RSC58Q07979 502 aa5.25□□□□□ -1.57
YPT52YKR014C DFG16Q99234 619 aa5.25□□□□□ -1.57
YPT52YKR014C SPS1P08458 490 aa5.24□□□□□ -1.57
YPT52YKR014C ENV11P53246 860 aa5.24□□□□□ -1.57
YPT52YKR014C TIF35Q04067 274 aaKnown RBP5.24□□□□□ -1.57
YPT52YKR014C TRP2P00899 507 aaKnown RBP5.23□□□□□ -1.57
YPT52YKR014C PIK1P39104 1066 aa5.23□□□□□ -1.57
YPT52YKR014C BAP2P38084 609 aa5.22□□□□□ -1.57
YPT52YKR014C SEA4P38164 1038 aa5.22□□□□□ -1.57
YPT52YKR014C MPH1P40562 993 aa5.22□□□□□ -1.57
YPT52YKR014C NOP7P53261 605 aaKnown RBP5.22□□□□□ -1.57
YPT52YKR014C GDE1Q02979 1223 aa5.22□□□□□ -1.57
YPT52YKR014C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
YPT52YKR014C AOS1Q06624 347 aa5.22□□□□□ -1.57
YPT52YKR014C YOR352WQ08816 343 aa5.22□□□□□ -1.57
YPT52YKR014C PIN2Q12057 282 aa5.22□□□□□ -1.57
YPT52YKR014C GNT1Q12096 491 aa5.22□□□□□ -1.57
YPT52YKR014C LPX1Q12405 387 aaKnown RBP5.22□□□□□ -1.57
YPT52YKR014C YER152CP10356 443 aa5.21□□□□□ -1.58
YPT52YKR014C DUT1P33317 147 aa5.21□□□□□ -1.58
YPT52YKR014C LRG1P35688 1017 aa5.21□□□□□ -1.58
YPT52YKR014C PRP43P53131 767 aaKnown RBP5.21□□□□□ -1.58
YPT52YKR014C RKM4Q12504 494 aa5.21□□□□□ -1.58
YPT52YKR014C INO1P11986 533 aa5.2□□□□□ -1.58
YPT52YKR014C IRC24P40580 263 aa5.2□□□□□ -1.58
YPT52YKR014C SEC26P41810 973 aaKnown RBP5.2□□□□□ -1.58
YPT52YKR014C YGR053CP53234 283 aa5.2□□□□□ -1.58
YPT52YKR014C EEB1Q02891 456 aa5.2□□□□□ -1.58
YPT52YKR014C VPS16Q03308 798 aa5.2□□□□□ -1.58
YPT52YKR014C SPP382Q06411 708 aaPredicted RBP5.2□□□□□ -1.58
YPT52YKR014C RCL1Q08096 367 aaPredicted RBP5.2□□□□□ -1.58
YPT52YKR014C THS1P04801 734 aaKnown RBP5.19□□□□□ -1.58
YPT52YKR014C SNF5P18480 905 aa5.19□□□□□ -1.58
YPT52YKR014C SEG2P34250 1132 aa5.19□□□□□ -1.58
YPT52YKR014C YKL107WP34251 309 aa5.19□□□□□ -1.58
YPT52YKR014C NIT1P40447 199 aa5.19□□□□□ -1.58
YPT52YKR014C FAL1Q12099 399 aaKnown RBP5.19□□□□□ -1.58
YPT52YKR014C ELM1P32801 640 aa5.18□□□□□ -1.58
YPT52YKR014C PIN4P34217 668 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
YPT52YKR014C MOT2P34909 587 aaKnown RBP5.18□□□□□ -1.58
YPT52YKR014C GEM1P39722 662 aa5.18□□□□□ -1.58
YPT52YKR014C FAA4P47912 694 aaKnown RBP5.18□□□□□ -1.58
YPT52YKR014C SNO2P53823 222 aa5.18□□□□□ -1.58
YPT52YKR014C BAS1P22035 811 aa5.17□□□□□ -1.58
YPT52YKR014C GAS1P22146 559 aaKnown RBP5.17□□□□□ -1.58
YPT52YKR014C RFC5P38251 354 aa5.17□□□□□ -1.58
YPT52YKR014C ETP1P38748 585 aaKnown RBP5.17□□□□□ -1.58
YPT52YKR014C YGL176CP46945 554 aa5.17□□□□□ -1.58
YPT52YKR014C ACM1Q08981 209 aa5.17□□□□□ -1.58
YPT52YKR014C RPL11AP0C0W9 174 aaKnown RBP5.16□□□□□ -1.58
YPT52YKR014C PAM1P37304 830 aaKnown RBP5.16□□□□□ -1.58
YPT52YKR014C VAC8P39968 578 aa5.16□□□□□ -1.58
YPT52YKR014C MRPL22P53881 309 aa5.16□□□□□ -1.58
YPT52YKR014C RSM24Q03976 319 aa5.16□□□□□ -1.58
YPT52YKR014C YLR225CQ05948 407 aaKnown RBP5.16□□□□□ -1.58
YPT52YKR014C SVS1Q12254 260 aa5.16□□□□□ -1.58
YPT52YKR014C RPL11BQ3E757 174 aaPredicted RBP5.16□□□□□ -1.58
YPT52YKR014C KIN2P13186 1147 aaKnown RBP5.15□□□□□ -1.59
YPT52YKR014C UGA2P38067 497 aa5.15□□□□□ -1.59
YPT52YKR014C MXR1P40029 184 aa5.15□□□□□ -1.59
YPT52YKR014C SBA1P28707 216 aaKnown RBP5.14□□□□□ -1.59
YPT52YKR014C RNQ1P25367 405 aa5.13□□□□□ -1.59
YPT52YKR014C AGP1P25376 633 aa5.13□□□□□ -1.59
YPT52YKR014C PNT1P38969 423 aa5.13□□□□□ -1.59
YPT52YKR014C RRT14P40470 206 aa5.13□□□□□ -1.59
YPT52YKR014C YFL054CP43549 646 aa5.13□□□□□ -1.59
YPT52YKR014C ALD6P54115 500 aaKnown RBP5.13□□□□□ -1.59
YPT52YKR014C ATG13Q06628 738 aa5.13□□□□□ -1.59
YPT52YKR014C OPI10Q08202 246 aa5.13□□□□□ -1.59
YPT52YKR014C WRS1Q12109 432 aaKnown RBP5.13□□□□□ -1.59
YPT52YKR014C APL1P27351 700 aa5.12□□□□□ -1.59
YPT52YKR014C ABD1P32783 436 aaPredicted RBP5.12□□□□□ -1.59
YPT52YKR014C YDL177CQ12257 170 aa5.12□□□□□ -1.59
YPT52YKR014C PRI2P20457 528 aa5.11□□□□□ -1.59
YPT52YKR014C DBP2P24783 546 aaKnown RBP5.11□□□□□ -1.59
YPT52YKR014C UBP5P39944 805 aa5.11□□□□□ -1.59
YPT52YKR014C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
YPT52YKR014C SHE9Q04172 456 aa5.11□□□□□ -1.59
YPT52YKR014C SGD1Q06132 899 aa5.11□□□□□ -1.59
YPT52YKR014C YPL066WQ12194 479 aa5.11□□□□□ -1.59
YPT52YKR014C CYC1P00044 109 aaPredicted RBP5.1□□□□□ -1.59
YPT52YKR014C SCT1P32784 759 aa5.1□□□□□ -1.59
YPT52YKR014C SLA2P33338 968 aa5.1□□□□□ -1.59
YPT52YKR014C CDA2Q06703 312 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms