RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W YKL107WP34251 309 aa4.36□□□□□ -1.71
NDC80YIL144W RRP14P36080 434 aaKnown RBP4.36□□□□□ -1.71
NDC80YIL144W BET3P36149 193 aa4.36□□□□□ -1.71
NDC80YIL144W PBY1P38254 753 aa4.36□□□□□ -1.71
NDC80YIL144W QNS1P38795 714 aaKnown RBP4.36□□□□□ -1.71
NDC80YIL144W NMD3P38861 518 aaKnown RBP4.36□□□□□ -1.71
NDC80YIL144W RTA1P53047 317 aa4.36□□□□□ -1.71
NDC80YIL144W UTP8P53276 713 aaKnown RBP4.36□□□□□ -1.71
NDC80YIL144W YMR074CQ04773 145 aa4.36□□□□□ -1.71
NDC80YIL144W EAF1Q06337 982 aa4.36□□□□□ -1.71
NDC80YIL144W CIT1P00890 479 aa4.35□□□□□ -1.71
NDC80YIL144W HBS1P32769 611 aaKnown RBP4.35□□□□□ -1.71
NDC80YIL144W PIN4P34217 668 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
NDC80YIL144W NUG1P40010 520 aaKnown RBP4.35□□□□□ -1.71
NDC80YIL144W RSA3Q05942 220 aaKnown RBP4.35□□□□□ -1.71
NDC80YIL144W SPO75Q07798 868 aa4.35□□□□□ -1.71
NDC80YIL144W RET1P22276 1149 aaKnown RBP4.34□□□□□ -1.71
NDC80YIL144W SWE1P32944 819 aa4.34□□□□□ -1.71
NDC80YIL144W RGD1P38339 666 aa4.34□□□□□ -1.71
NDC80YIL144W SKN7P38889 622 aa4.34□□□□□ -1.71
NDC80YIL144W CHZ1P40019 153 aaPredicted RBP4.34□□□□□ -1.71
NDC80YIL144W OSW7P43611 510 aa4.34□□□□□ -1.71
NDC80YIL144W DOT1Q04089 582 aaKnown RBP4.34□□□□□ -1.71
NDC80YIL144W YOR223WQ12015 292 aa4.34□□□□□ -1.71
NDC80YIL144W HSP60P19882 572 aaKnown RBP4.34□□□□□ -1.71
NDC80YIL144W KIP1P28742 1111 aa4.34□□□□□ -1.71
NDC80YIL144W GPT2P36148 743 aa4.34□□□□□ -1.71
NDC80YIL144W MSH4P40965 878 aaPredicted RBP4.34□□□□□ -1.71
NDC80YIL144W YFL054CP43549 646 aa4.34□□□□□ -1.71
NDC80YIL144W BUD9P53226 547 aa4.34□□□□□ -1.71
NDC80YIL144W AVO1Q08236 1176 aa4.34□□□□□ -1.71
NDC80YIL144W OSH2Q12451 1283 aa4.34□□□□□ -1.71
NDC80YIL144W GPB2P39717 880 aa4.33□□□□□ -1.72
NDC80YIL144W BOI2P39969 1040 aa4.33□□□□□ -1.72
NDC80YIL144W MAL11P53048 616 aa4.33□□□□□ -1.72
NDC80YIL144W ERP6P53198 216 aa4.33□□□□□ -1.72
NDC80YIL144W EAR1Q03212 550 aa4.33□□□□□ -1.72
NDC80YIL144W LAP2Q10740 671 aa4.33□□□□□ -1.72
NDC80YIL144W GNT1Q12096 491 aa4.33□□□□□ -1.72
NDC80YIL144W MET6P05694 767 aaKnown RBP4.33□□□□□ -1.72
NDC80YIL144W RPL11AP0C0W9 174 aaKnown RBP4.33□□□□□ -1.72
NDC80YIL144W PHO8P11491 566 aa4.33□□□□□ -1.72
NDC80YIL144W TOP3P13099 656 aa4.33□□□□□ -1.72
NDC80YIL144W ARE1P25628 610 aa4.33□□□□□ -1.72
NDC80YIL144W PNT1P38969 423 aa4.33□□□□□ -1.72
NDC80YIL144W MXR1P40029 184 aa4.33□□□□□ -1.72
NDC80YIL144W ALR2P43553 858 aa4.33□□□□□ -1.72
NDC80YIL144W HNT2P49775 206 aa4.33□□□□□ -1.72
NDC80YIL144W RPL11BQ3E757 174 aaPredicted RBP4.33□□□□□ -1.72
NDC80YIL144W VPS53P47061 822 aa4.32□□□□□ -1.72
NDC80YIL144W YLR257WQ06146 321 aaKnown RBP4.32□□□□□ -1.72
NDC80YIL144W YLL054CQ12244 843 aa4.32□□□□□ -1.72
NDC80YIL144W HBN1Q96VH4 193 aa4.32□□□□□ -1.72
NDC80YIL144W NFS1P25374 497 aa4.31□□□□□ -1.72
NDC80YIL144W RCL1Q08096 367 aaPredicted RBP4.31□□□□□ -1.72
NDC80YIL144W SMY2P32909 740 aaKnown RBP4.31□□□□□ -1.72
NDC80YIL144W AFR1P33304 620 aa4.31□□□□□ -1.72
NDC80YIL144W YKL151CP36059 337 aa4.31□□□□□ -1.72
NDC80YIL144W ATG14P38270 344 aa4.31□□□□□ -1.72
NDC80YIL144W MNN1P39106 762 aa4.31□□□□□ -1.72
NDC80YIL144W YJL045WP47052 634 aa4.31□□□□□ -1.72
NDC80YIL144W ALT1P52893 592 aa4.31□□□□□ -1.72
NDC80YIL144W YNR014WP53719 212 aa4.31□□□□□ -1.72
NDC80YIL144W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
NDC80YIL144W TDA6Q06466 467 aa4.31□□□□□ -1.72
NDC80YIL144W SPO21Q12411 609 aa4.31□□□□□ -1.72
NDC80YIL144W AI3P03877 415 aa4.3□□□□□ -1.72
NDC80YIL144W YBR284WP38150 797 aa4.3□□□□□ -1.72
NDC80YIL144W PRY1P47032 299 aa4.3□□□□□ -1.72
NDC80YIL144W YPL260WQ08977 551 aa4.3□□□□□ -1.72
NDC80YIL144W YLR125WQ12138 136 aa4.3□□□□□ -1.72
NDC80YIL144W NNK1P36003 928 aa4.3□□□□□ -1.72
NDC80YIL144W GGA2P38817 585 aaKnown RBP4.3□□□□□ -1.72
NDC80YIL144W GUS1P46655 708 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
NDC80YIL144W YJR142WP47173 342 aa4.3□□□□□ -1.72
NDC80YIL144W RTS3P53289 263 aa4.3□□□□□ -1.72
NDC80YIL144W YMR187CQ03236 431 aa4.3□□□□□ -1.72
NDC80YIL144W BUL2Q03758 920 aaKnown RBP4.3□□□□□ -1.72
NDC80YIL144W GAL11P19659 1081 aa4.29□□□□□ -1.72
NDC80YIL144W YCK2P23292 546 aaKnown RBP4.29□□□□□ -1.72
NDC80YIL144W SFA1P32771 386 aa4.29□□□□□ -1.72
NDC80YIL144W ERT1P38140 529 aa4.29□□□□□ -1.72
NDC80YIL144W SLN1P39928 1220 aaPredicted RBP4.29□□□□□ -1.72
NDC80YIL144W KRI1P42846 591 aaKnown RBP4.29□□□□□ -1.72
NDC80YIL144W PRP9P19736 530 aaKnown RBP4.28□□□□□ -1.72
NDC80YIL144W NAM7P30771 971 aaKnown RBP4.28□□□□□ -1.72
NDC80YIL144W THI4P32318 326 aa4.28□□□□□ -1.72
NDC80YIL144W SLA2P33338 968 aa4.28□□□□□ -1.72
NDC80YIL144W MCX1P38323 520 aaPredicted RBP4.28□□□□□ -1.72
NDC80YIL144W HSE1P38753 452 aa4.28□□□□□ -1.72
NDC80YIL144W HUL4P40985 892 aa4.28□□□□□ -1.72
NDC80YIL144W YJR008WP47085 338 aa4.28□□□□□ -1.72
NDC80YIL144W SPP382Q06411 708 aaPredicted RBP4.28□□□□□ -1.72
NDC80YIL144W RPS4AP0CX35 261 aaKnown RBP4.28□□□□□ -1.72
NDC80YIL144W RPS4BP0CX36 261 aaKnown RBP4.28□□□□□ -1.72
NDC80YIL144W SNF5P18480 905 aa4.28□□□□□ -1.72
NDC80YIL144W BAP2P38084 609 aa4.28□□□□□ -1.72
NDC80YIL144W YDR306CQ06640 478 aa4.28□□□□□ -1.72
NDC80YIL144W PUS7Q08647 676 aaKnown RBP4.28□□□□□ -1.72
NDC80YIL144W NPP1P25353 742 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms