RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	FOL2	P51601	243 aa	Known RBP	4.57	□□□□□ -1.68
VHR1	YIL056W	HXT17	P53631	564 aa		4.57	□□□□□ -1.68
VHR1	YIL056W	HXT15	P54854	567 aa		4.57	□□□□□ -1.68
VHR1	YIL056W	SPP382	Q06411	708 aa	Predicted RBP	4.57	□□□□□ -1.68
VHR1	YIL056W	ADP1	P25371	1049 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	CCZ1	P38273	704 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	PTC7	P38797	343 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	TNA1	P53322	534 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	TIF35	Q04067	274 aa	Known RBP	4.56	□□□□□ -1.68
VHR1	YIL056W	YLR225C	Q05948	407 aa	Known RBP	4.56	□□□□□ -1.68
VHR1	YIL056W	RGA2	Q06407	1009 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	DUT1	P33317	147 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	YKL107W	P34251	309 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	YKR073C	P36153	106 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	SDH1	Q00711	640 aa		4.56	□□□□□ -1.68
VHR1	YIL056W	HOS3	Q02959	697 aa	Known RBP	4.56	□□□□□ -1.68
VHR1	YIL056W	YSC84	P32793	468 aa		4.55	□□□□□ -1.68
VHR1	YIL056W	AIM26	P32858	118 aa		4.55	□□□□□ -1.68
VHR1	YIL056W	MDL2	P33311	773 aa		4.55	□□□□□ -1.68
VHR1	YIL056W	EEB1	Q02891	456 aa		4.55	□□□□□ -1.68
VHR1	YIL056W	GCD1	P09032	578 aa	Predicted RBP	4.54	□□□□□ -1.68
VHR1	YIL056W	YGL176C	P46945	554 aa		4.54	□□□□□ -1.68
VHR1	YIL056W	SSY1	Q03770	852 aa		4.54	□□□□□ -1.68
VHR1	YIL056W	MAG2	Q06436	670 aa	Known RBP	4.54	□□□□□ -1.68
VHR1	YIL056W	RKM4	Q12504	494 aa		4.54	□□□□□ -1.68
VHR1	YIL056W	ABD1	P32783	436 aa	Predicted RBP	4.54	□□□□□ -1.68
VHR1	YIL056W	OYE3	P41816	400 aa	Predicted RBP	4.54	□□□□□ -1.68
VHR1	YIL056W	YGR053C	P53234	283 aa		4.54	□□□□□ -1.68
VHR1	YIL056W	TDA5	Q06417	326 aa	Known RBP	4.54	□□□□□ -1.68
VHR1	YIL056W	OPI10	Q08202	246 aa		4.54	□□□□□ -1.68
VHR1	YIL056W	GNT1	Q12096	491 aa		4.53	□□□□□ -1.68
VHR1	YIL056W	YER152C	P10356	443 aa		4.52	□□□□□ -1.69
VHR1	YIL056W	BRE4	Q07660	1125 aa		4.52	□□□□□ -1.69
VHR1	YIL056W	SRO9	P25567	434 aa	Known RBP	4.52	□□□□□ -1.69
VHR1	YIL056W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	RIP-Chip
VHR1	YIL056W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
VHR1	YIL056W	MPH1	P40562	993 aa		4.52	□□□□□ -1.69
VHR1	YIL056W	RPN3	P40016	523 aa	Known RBP	4.51	□□□□□ -1.69
VHR1	YIL056W	YOR352W	Q08816	343 aa		4.51	□□□□□ -1.69
VHR1	YIL056W	SPS1	P08458	490 aa		4.5	□□□□□ -1.69
VHR1	YIL056W	SBA1	P28707	216 aa	Known RBP	4.5	□□□□□ -1.69
VHR1	YIL056W	PEX7	P39108	375 aa		4.5	□□□□□ -1.69
VHR1	YIL056W	ESC2	Q06340	456 aa		4.5	□□□□□ -1.69
VHR1	YIL056W	RSC58	Q07979	502 aa		4.5	□□□□□ -1.69
VHR1	YIL056W	SAM35	P14693	329 aa		4.49	□□□□□ -1.69
VHR1	YIL056W	AGP1	P25376	633 aa		4.49	□□□□□ -1.69
VHR1	YIL056W	HSP78	P33416	811 aa		4.49	□□□□□ -1.69
VHR1	YIL056W	POL12	P38121	705 aa	Predicted RBP	4.49	□□□□□ -1.69
VHR1	YIL056W	PIK1	P39104	1066 aa		4.49	□□□□□ -1.69
VHR1	YIL056W	MXR1	P40029	184 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	NNF1	P47149	201 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	THS1	P04801	734 aa	Known RBP	4.48	□□□□□ -1.69
VHR1	YIL056W	RPL11A	P0C0W9	174 aa	Known RBP	4.48	□□□□□ -1.69
VHR1	YIL056W	MRP8	P35719	219 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	VBA5	P36172	582 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	UGA2	P38067	497 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	SEA4	P38164	1038 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	INP52	P50942	1183 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	ACM1	Q08981	209 aa		4.48	□□□□□ -1.69
VHR1	YIL056W	RPL11B	Q3E757	174 aa	Predicted RBP	4.48	□□□□□ -1.69
VHR1	YIL056W	GRX1	P25373	110 aa	Known RBP	4.47	□□□□□ -1.69
VHR1	YIL056W	YKL069W	P36088	180 aa		4.47	□□□□□ -1.69
VHR1	YIL056W	MBP1	P39678	833 aa		4.47	□□□□□ -1.69
VHR1	YIL056W	TPO2	P53283	614 aa		4.47	□□□□□ -1.69
VHR1	YIL056W	NAN1	Q02931	896 aa	Known RBP	4.47	□□□□□ -1.69
VHR1	YIL056W	SPO75	Q07798	868 aa		4.47	□□□□□ -1.69
VHR1	YIL056W	RCL1	Q08096	367 aa	Predicted RBP	4.47	□□□□□ -1.69
VHR1	YIL056W	GLT1	Q12680	2145 aa	Known RBP	4.47	□□□□□ -1.69
VHR1	YIL056W	PPH3	P32345	308 aa		4.46	□□□□□ -1.69
VHR1	YIL056W	GEM1	P39722	662 aa		4.46	□□□□□ -1.69
VHR1	YIL056W	YFL054C	P43549	646 aa		4.46	□□□□□ -1.69
VHR1	YIL056W	SSF2	Q12153	453 aa	Predicted RBP	4.46	□□□□□ -1.69
VHR1	YIL056W	YPL066W	Q12194	479 aa		4.46	□□□□□ -1.69
VHR1	YIL056W	OSH2	Q12451	1283 aa		4.46	□□□□□ -1.69
VHR1	YIL056W	SAH1	P39954	449 aa	Known RBP	4.46	□□□□□ -1.7
VHR1	YIL056W	SPF1	P39986	1215 aa	Known RBP	4.46	□□□□□ -1.7
VHR1	YIL056W	CTH1	P47976	325 aa		4.46	□□□□□ -1.7
VHR1	YIL056W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	not detected
VHR1	YIL056W	RSM24	Q03976	319 aa		4.46	□□□□□ -1.7
VHR1	YIL056W	YDR306C	Q06640	478 aa		4.46	□□□□□ -1.7
VHR1	YIL056W	SVS1	Q12254	260 aa		4.46	□□□□□ -1.7
VHR1	YIL056W	AAR2	P32357	355 aa	Predicted RBP	4.45	□□□□□ -1.7
VHR1	YIL056W	RFC5	P38251	354 aa		4.45	□□□□□ -1.7
VHR1	YIL056W	TIM54	P47045	478 aa		4.45	□□□□□ -1.7
VHR1	YIL056W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
VHR1	YIL056W	SRP1	Q02821	542 aa	Known RBP	4.45	□□□□□ -1.7
VHR1	YIL056W	SHE9	Q04172	456 aa		4.45	□□□□□ -1.7
VHR1	YIL056W	DUS3	Q06053	668 aa	Known RBP	4.45	□□□□□ -1.7
VHR1	YIL056W	KIN2	P13186	1147 aa	Known RBP	4.44	□□□□□ -1.7
VHR1	YIL056W	SNF5	P18480	905 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	APL1	P27351	700 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	PBY1	P38254	753 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	YBR184W	P38299	523 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	PNT1	P38969	423 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	SEC26	P41810	973 aa	Known RBP	4.44	□□□□□ -1.7
VHR1	YIL056W	RAD4	P14736	754 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	PRP9	P19736	530 aa	Known RBP	4.44	□□□□□ -1.7
VHR1	YIL056W	BAP2	P38084	609 aa		4.44	□□□□□ -1.7
VHR1	YIL056W	ETP1	P38748	585 aa	Known RBP	4.44	□□□□□ -1.7
VHR1	YIL056W	IRR1	P40541	1150 aa		4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms