RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
URM1YIL008W RCL1Q08096 367 aaPredicted RBP3.64□□□□□ -1.83
URM1YIL008W NBA1Q08229 501 aaKnown RBP3.64□□□□□ -1.83
URM1YIL008W RNQ1P25367 405 aa3.63□□□□□ -1.83
URM1YIL008W PET112P33893 541 aa3.63□□□□□ -1.83
URM1YIL008W RER2P35196 286 aa3.63□□□□□ -1.83
URM1YIL008W MNR2P35724 969 aa3.63□□□□□ -1.83
URM1YIL008W BAP2P38084 609 aa3.63□□□□□ -1.83
URM1YIL008W CCZ1P38273 704 aa3.63□□□□□ -1.83
URM1YIL008W NIT1P40447 199 aa3.63□□□□□ -1.83
URM1YIL008W CDC34P14682 295 aa3.62□□□□□ -1.83
URM1YIL008W SNF5P18480 905 aa3.62□□□□□ -1.83
URM1YIL008W PUF4P25339 888 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
URM1YIL008W MLS1P30952 554 aa3.62□□□□□ -1.83
URM1YIL008W PIK1P39104 1066 aa3.62□□□□□ -1.83
URM1YIL008W PRP43P53131 767 aaKnown RBP3.62□□□□□ -1.83
URM1YIL008W RSB1Q08417 382 aa3.62□□□□□ -1.83
URM1YIL008W SPS1P08458 490 aa3.61□□□□□ -1.83
URM1YIL008W YER152CP10356 443 aa3.61□□□□□ -1.83
URM1YIL008W GAS1P22146 559 aaKnown RBP3.61□□□□□ -1.83
URM1YIL008W DUT1P33317 147 aa3.61□□□□□ -1.83
URM1YIL008W TSA1P34760 196 aaKnown RBP3.61□□□□□ -1.83
URM1YIL008W UBP5P39944 805 aa3.61□□□□□ -1.83
URM1YIL008W HNT2P49775 206 aa3.61□□□□□ -1.83
URM1YIL008W ENV11P53246 860 aa3.61□□□□□ -1.83
URM1YIL008W TIF35Q04067 274 aaKnown RBP3.61□□□□□ -1.83
URM1YIL008W CDA2Q06703 312 aa3.61□□□□□ -1.83
URM1YIL008W LYP1P32487 611 aa3.6□□□□□ -1.83
URM1YIL008W ETP1P38748 585 aaKnown RBP3.6□□□□□ -1.83
URM1YIL008W MET10P39692 1035 aa3.6□□□□□ -1.83
URM1YIL008W MPH1P40562 993 aa3.6□□□□□ -1.83
URM1YIL008W SEC26P41810 973 aaKnown RBP3.6□□□□□ -1.83
URM1YIL008W MRPL22P53881 309 aa3.6□□□□□ -1.83
URM1YIL008W YDL177CQ12257 170 aa3.6□□□□□ -1.83
URM1YIL008W TRP2P00899 507 aaKnown RBP3.59□□□□□ -1.83
URM1YIL008W NAP1P25293 417 aaKnown RBP3.59□□□□□ -1.83
URM1YIL008W MCM7P38132 845 aa3.59□□□□□ -1.83
URM1YIL008W TYW3P53177 273 aa3.59□□□□□ -1.83
URM1YIL008W EEB1Q02891 456 aa3.59□□□□□ -1.83
URM1YIL008W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
URM1YIL008W SVF1Q05515 481 aa3.59□□□□□ -1.83
URM1YIL008W GNT1Q12096 491 aa3.59□□□□□ -1.83
URM1YIL008W YFL054CP43549 646 aa3.58□□□□□ -1.84
URM1YIL008W SNO2P53823 222 aa3.58□□□□□ -1.84
URM1YIL008W RPL11AP0C0W9 174 aaKnown RBP3.57□□□□□ -1.84
URM1YIL008W CLN2P20438 545 aa3.57□□□□□ -1.84
URM1YIL008W ABZ1P37254 787 aaPredicted RBP3.57□□□□□ -1.84
URM1YIL008W YGR053CP53234 283 aa3.57□□□□□ -1.84
URM1YIL008W RPL11BQ3E757 174 aaPredicted RBP3.57□□□□□ -1.84
URM1YIL008W INO1P11986 533 aa3.56□□□□□ -1.84
URM1YIL008W PRP6P19735 899 aaPredicted RBP3.56□□□□□ -1.84
URM1YIL008W BAS1P22035 811 aa3.56□□□□□ -1.84
URM1YIL008W MOT2P34909 587 aaKnown RBP3.56□□□□□ -1.84
URM1YIL008W RFC5P38251 354 aa3.56□□□□□ -1.84
URM1YIL008W AIM3P38266 947 aaKnown RBP3.56□□□□□ -1.84
URM1YIL008W GEM1P39722 662 aa3.56□□□□□ -1.84
URM1YIL008W MXR1P40029 184 aa3.56□□□□□ -1.84
URM1YIL008W MAD1P40957 749 aa3.56□□□□□ -1.84
URM1YIL008W SNU71P53207 620 aaKnown RBP3.56□□□□□ -1.84
URM1YIL008W SPO20Q04359 397 aa3.56□□□□□ -1.84
URM1YIL008W SPP382Q06411 708 aaPredicted RBP3.56□□□□□ -1.84
URM1YIL008W YOR352WQ08816 343 aa3.56□□□□□ -1.84
URM1YIL008W ACM1Q08981 209 aa3.56□□□□□ -1.84
URM1YIL008W RKM4Q12504 494 aa3.56□□□□□ -1.84
URM1YIL008W DBP2P24783 546 aaKnown RBP3.55□□□□□ -1.84
URM1YIL008W THI80P35202 319 aa3.55□□□□□ -1.84
URM1YIL008W UGA2P38067 497 aa3.55□□□□□ -1.84
URM1YIL008W PNT1P38969 423 aa3.55□□□□□ -1.84
URM1YIL008W YGL176CP46945 554 aa3.55□□□□□ -1.84
URM1YIL008W FAA4P47912 694 aaKnown RBP3.55□□□□□ -1.84
URM1YIL008W RIM8P53179 542 aa3.55□□□□□ -1.84
URM1YIL008W CWC24P53769 259 aa3.55□□□□□ -1.84
URM1YIL008W GDE1Q02979 1223 aa3.55□□□□□ -1.84
URM1YIL008W VPS16Q03308 798 aa3.55□□□□□ -1.84
URM1YIL008W RSM24Q03976 319 aa3.55□□□□□ -1.84
URM1YIL008W YLR225CQ05948 407 aaKnown RBP3.55□□□□□ -1.84
URM1YIL008W JIP5Q06214 492 aaPredicted RBP3.55□□□□□ -1.84
URM1YIL008W ATG13Q06628 738 aa3.55□□□□□ -1.84
URM1YIL008W YPL277CQ08989 487 aa3.55□□□□□ -1.84
URM1YIL008W PIN2Q12057 282 aa3.55□□□□□ -1.84
URM1YIL008W SVS1Q12254 260 aa3.55□□□□□ -1.84
URM1YIL008W CYC1P00044 109 aaPredicted RBP3.54□□□□□ -1.84
URM1YIL008W SOD2P00447 233 aa3.54□□□□□ -1.84
URM1YIL008W THS1P04801 734 aaKnown RBP3.54□□□□□ -1.84
URM1YIL008W RPS13P05756 151 aaKnown RBP3.54□□□□□ -1.84
URM1YIL008W SLA2P33338 968 aa3.54□□□□□ -1.84
URM1YIL008W YKL107WP34251 309 aa3.54□□□□□ -1.84
URM1YIL008W LAM1P38851 1228 aa3.54□□□□□ -1.84
URM1YIL008W SNF7P39929 240 aaKnown RBP3.54□□□□□ -1.84
URM1YIL008W KRI1P42846 591 aaKnown RBP3.54□□□□□ -1.84
URM1YIL008W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
URM1YIL008W SGD1Q06132 899 aa3.54□□□□□ -1.84
URM1YIL008W YPL066WQ12194 479 aa3.54□□□□□ -1.84
URM1YIL008W KIN2P13186 1147 aaKnown RBP3.53□□□□□ -1.84
URM1YIL008W APL1P27351 700 aa3.53□□□□□ -1.84
URM1YIL008W PIN4P34217 668 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
URM1YIL008W MEF2P39677 819 aa3.53□□□□□ -1.84
URM1YIL008W RRT14P40470 206 aa3.53□□□□□ -1.84
URM1YIL008W BI4P03879 638 aa3.52□□□□□ -1.85
URM1YIL008W CMP2P14747 604 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms