RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C MLS1P30952 554 aa6.05□□□□□ -1.44
CUP1-2YHR055C GTS1P40956 396 aa6.05□□□□□ -1.44
CUP1-2YHR055C TYW3P53177 273 aa6.05□□□□□ -1.44
CUP1-2YHR055C TNA1P53322 534 aa6.05□□□□□ -1.44
CUP1-2YHR055C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
CUP1-2YHR055C HOS3Q02959 697 aaKnown RBP6.05□□□□□ -1.44
CUP1-2YHR055C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
CUP1-2YHR055C TIF35Q04067 274 aaKnown RBP6.05□□□□□ -1.44
CUP1-2YHR055C SPO20Q04359 397 aa6.05□□□□□ -1.44
CUP1-2YHR055C NBA1Q08229 501 aaKnown RBP6.05□□□□□ -1.44
CUP1-2YHR055C CCZ1P38273 704 aa6.04□□□□□ -1.44
CUP1-2YHR055C RPN3P40016 523 aaKnown RBP6.04□□□□□ -1.44
CUP1-2YHR055C CTH1P47976 325 aa6.04□□□□□ -1.44
CUP1-2YHR055C NRD1P53617 575 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44 RIP-Chip
CUP1-2YHR055C AOS1Q06624 347 aa6.04□□□□□ -1.44
CUP1-2YHR055C SAM35P14693 329 aa6.03□□□□□ -1.44
CUP1-2YHR055C PUF4P25339 888 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
CUP1-2YHR055C FAA4P47912 694 aaKnown RBP6.03□□□□□ -1.44
CUP1-2YHR055C EEB1Q02891 456 aa6.03□□□□□ -1.44
CUP1-2YHR055C SNF7P39929 240 aaKnown RBP6.02□□□□□ -1.45
CUP1-2YHR055C FOL2P51601 243 aaKnown RBP6.02□□□□□ -1.45
CUP1-2YHR055C YGR053CP53234 283 aa6.02□□□□□ -1.45
CUP1-2YHR055C AIM26P32858 118 aa6.01□□□□□ -1.45
CUP1-2YHR055C HSP78P33416 811 aa6.01□□□□□ -1.45
CUP1-2YHR055C VAC8P39968 578 aa6.01□□□□□ -1.45
CUP1-2YHR055C MPH1P40562 993 aa6.01□□□□□ -1.45
CUP1-2YHR055C RSB1Q08417 382 aa6.01□□□□□ -1.45
CUP1-2YHR055C GNT1Q12096 491 aa6.01□□□□□ -1.45
CUP1-2YHR055C FAL1Q12099 399 aaKnown RBP6.01□□□□□ -1.45
CUP1-2YHR055C RKM4Q12504 494 aa6.01□□□□□ -1.45
CUP1-2YHR055C YER152CP10356 443 aa6□□□□□ -1.45
CUP1-2YHR055C INO1P11986 533 aa6□□□□□ -1.45
CUP1-2YHR055C MOT2P34909 587 aaKnown RBP6□□□□□ -1.45
CUP1-2YHR055C RSC58Q07979 502 aa6□□□□□ -1.45
CUP1-2YHR055C YKL107WP34251 309 aa5.99□□□□□ -1.45
CUP1-2YHR055C POL12P38121 705 aaPredicted RBP5.99□□□□□ -1.45
CUP1-2YHR055C PIK1P39104 1066 aa5.99□□□□□ -1.45
CUP1-2YHR055C ALD6P54115 500 aaKnown RBP5.99□□□□□ -1.45
CUP1-2YHR055C SPP382Q06411 708 aaPredicted RBP5.99□□□□□ -1.45
CUP1-2YHR055C BAS1P22035 811 aa5.98□□□□□ -1.45
CUP1-2YHR055C BAP2P38084 609 aa5.98□□□□□ -1.45
CUP1-2YHR055C SEA4P38164 1038 aa5.98□□□□□ -1.45
CUP1-2YHR055C ORC3P54790 616 aa5.98□□□□□ -1.45
CUP1-2YHR055C YLR225CQ05948 407 aaKnown RBP5.98□□□□□ -1.45
CUP1-2YHR055C SPS1P08458 490 aa5.97□□□□□ -1.45
CUP1-2YHR055C YGL176CP46945 554 aa5.97□□□□□ -1.45
CUP1-2YHR055C RCL1Q08096 367 aaPredicted RBP5.97□□□□□ -1.45
CUP1-2YHR055C LPX1Q12405 387 aaKnown RBP5.97□□□□□ -1.45
CUP1-2YHR055C SNF5P18480 905 aa5.96□□□□□ -1.46
CUP1-2YHR055C ECL1P48235 211 aa5.96□□□□□ -1.46
CUP1-2YHR055C DFG16Q99234 619 aa5.96□□□□□ -1.46
CUP1-2YHR055C PRI2P20457 528 aa5.95□□□□□ -1.46
CUP1-2YHR055C PIN4P34217 668 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
CUP1-2YHR055C ENV11P53246 860 aa5.95□□□□□ -1.46
CUP1-2YHR055C OPI10Q08202 246 aa5.95□□□□□ -1.46
CUP1-2YHR055C WRS1Q12109 432 aaKnown RBP5.95□□□□□ -1.46
CUP1-2YHR055C RPL11AP0C0W9 174 aaKnown RBP5.94□□□□□ -1.46
CUP1-2YHR055C AGP1P25376 633 aa5.94□□□□□ -1.46
CUP1-2YHR055C SBA1P28707 216 aaKnown RBP5.94□□□□□ -1.46
CUP1-2YHR055C ABD1P32783 436 aaPredicted RBP5.94□□□□□ -1.46
CUP1-2YHR055C RPL11BQ3E757 174 aaPredicted RBP5.94□□□□□ -1.46
CUP1-2YHR055C THS1P04801 734 aaKnown RBP5.93□□□□□ -1.46
CUP1-2YHR055C LRG1P35688 1017 aa5.93□□□□□ -1.46
CUP1-2YHR055C GEM1P39722 662 aa5.93□□□□□ -1.46
CUP1-2YHR055C MXR1P40029 184 aa5.93□□□□□ -1.46
CUP1-2YHR055C SEC26P41810 973 aaKnown RBP5.93□□□□□ -1.46
CUP1-2YHR055C ACM1Q08981 209 aa5.93□□□□□ -1.46
CUP1-2YHR055C YPL066WQ12194 479 aa5.93□□□□□ -1.46
CUP1-2YHR055C ESC2Q06340 456 aa5.92□□□□□ -1.46
CUP1-2YHR055C UGA2P38067 497 aa5.91□□□□□ -1.46
CUP1-2YHR055C PNT1P38969 423 aa5.91□□□□□ -1.46
CUP1-2YHR055C YFL054CP43549 646 aa5.91□□□□□ -1.46
CUP1-2YHR055C AVT1P47082 602 aa5.91□□□□□ -1.46
CUP1-2YHR055C TDA5Q06417 326 aaKnown RBP5.91□□□□□ -1.46
CUP1-2YHR055C YOR352WQ08816 343 aa5.91□□□□□ -1.46
CUP1-2YHR055C RFC5P38251 354 aa5.9□□□□□ -1.46
CUP1-2YHR055C ETP1P38748 585 aaKnown RBP5.9□□□□□ -1.46
CUP1-2YHR055C SHE9Q04172 456 aa5.9□□□□□ -1.46
CUP1-2YHR055C SVS1Q12254 260 aa5.9□□□□□ -1.46
CUP1-2YHR055C DBP2P24783 546 aaKnown RBP5.89□□□□□ -1.47
CUP1-2YHR055C SEG2P34250 1132 aa5.89□□□□□ -1.47
CUP1-2YHR055C MRP8P35719 219 aa5.89□□□□□ -1.47
CUP1-2YHR055C YKL069WP36088 180 aa5.89□□□□□ -1.47
CUP1-2YHR055C VBA5P36172 582 aa5.89□□□□□ -1.47
CUP1-2YHR055C PRP43P53131 767 aaKnown RBP5.89□□□□□ -1.47
CUP1-2YHR055C RSM24Q03976 319 aa5.89□□□□□ -1.47
CUP1-2YHR055C SLA2P33338 968 aa5.88□□□□□ -1.47
CUP1-2YHR055C SIP5P40210 489 aaKnown RBP5.88□□□□□ -1.47
CUP1-2YHR055C SNO2P53823 222 aa5.88□□□□□ -1.47
CUP1-2YHR055C KIN2P13186 1147 aaKnown RBP5.87□□□□□ -1.47
CUP1-2YHR055C GAS1P22146 559 aaKnown RBP5.87□□□□□ -1.47
CUP1-2YHR055C MBP1P39678 833 aa5.87□□□□□ -1.47
CUP1-2YHR055C SPF1P39986 1215 aaKnown RBP5.87□□□□□ -1.47
CUP1-2YHR055C RRT14P40470 206 aa5.87□□□□□ -1.47
CUP1-2YHR055C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
CUP1-2YHR055C ATG13Q06628 738 aa5.87□□□□□ -1.47
CUP1-2YHR055C SSF2Q12153 453 aaPredicted RBP5.87□□□□□ -1.47
CUP1-2YHR055C BI4P03879 638 aa5.86□□□□□ -1.47
CUP1-2YHR055C NIT1P40447 199 aa5.86□□□□□ -1.47
CUP1-2YHR055C MRPL22P53881 309 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 490.2 ms