RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BCD1	YHR040W	MNR2	P35724	969 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	SSB2	P40150	613 aa	Known RBP	4.09	□□□□□ -1.75
BCD1	YHR040W	RRT14	P40470	206 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	YJL181W	P46987	611 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	YMR074C	Q04773	145 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	SPR28	Q04921	423 aa		4.09	□□□□□ -1.75
BCD1	YHR040W	ESF1	Q06344	628 aa	Known RBP	4.09	□□□□□ -1.75
BCD1	YHR040W	MCM2	P29469	868 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
BCD1	YHR040W	YNR014W	P53719	212 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	CDC55	Q00362	526 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	BDF2	Q07442	638 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	GPI13	Q07830	1017 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	THI72	Q08579	599 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	YOR131C	Q12486	218 aa		4.08	□□□□□ -1.76
BCD1	YHR040W	RPS19A	P07280	144 aa	Known RBP	4.07	□□□□□ -1.76
BCD1	YHR040W	RPS19B	P07281	144 aa	Predicted RBP	4.07	□□□□□ -1.76
BCD1	YHR040W	ALG14	P38242	237 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	YNG2	P38806	282 aa	Known RBP	4.07	□□□□□ -1.76
BCD1	YHR040W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
BCD1	YHR040W	DAK2	P43550	591 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	RSC4	Q02206	625 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	SRT1	Q03175	343 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	UTP14	Q04500	899 aa	Known RBP	4.07	□□□□□ -1.76
BCD1	YHR040W	BSC2	Q05611	235 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	BMS1	Q08965	1183 aa	Known RBP	4.07	□□□□□ -1.76
BCD1	YHR040W	CDC53	Q12018	815 aa	Known RBP	4.07	□□□□□ -1.76
BCD1	YHR040W	USO1	P25386	1790 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	APC1	P53886	1748 aa		4.07	□□□□□ -1.76
BCD1	YHR040W	RSF2	P46974	1380 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	RAD50	P12753	1312 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	VPS35	P34110	944 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	YHL008C	P38750	627 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	BOI2	P39969	1040 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	SAM37	P50110	327 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	YGR122W	P53272	402 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	NSG2	P53898	299 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	DNM1	P54861	757 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	YOL057W	Q08225	711 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	YGR161W-C	Q3E744	92 aa		4.06	□□□□□ -1.76
BCD1	YHR040W	MRP10	O75012	95 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	SUP35	P05453	685 aa	Known RBP	4.05	□□□□□ -1.76
BCD1	YHR040W	IME2	P32581	645 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	PEP7	P32609	515 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	PET112	P33893	541 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	PGM2	P37012	569 aa	Known RBP	4.05	□□□□□ -1.76
BCD1	YHR040W	TPM2	P40414	161 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	INP51	P40559	946 aa	Known RBP	4.05	□□□□□ -1.76
BCD1	YHR040W	XKS1	P42826	600 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	MDG1	P53885	366 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	NOC3	Q07896	663 aa	Predicted RBP	4.05	□□□□□ -1.76
BCD1	YHR040W	NHA1	Q99271	985 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	YRF1-2	P40105	1681 aa		4.05	□□□□□ -1.76
BCD1	YHR040W	COQ4	O13525	335 aa		4.04	□□□□□ -1.76
BCD1	YHR040W	FUS1	P11710	512 aa		4.04	□□□□□ -1.76
BCD1	YHR040W	CYC8	P14922	966 aa		4.04	□□□□□ -1.76
BCD1	YHR040W	TPM1	P17536	199 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	PYC2	P32327	1180 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	VPS24	P36095	224 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	CIC1	P38779	376 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	MNN1	P39106	762 aa		4.04	□□□□□ -1.76
BCD1	YHR040W	RPS26A	P39938	119 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	RPS26B	P39939	119 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	SBE2	P42223	864 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	ATG13	Q06628	738 aa		4.04	□□□□□ -1.76
BCD1	YHR040W	INP54	Q08227	384 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	LSP1	Q12230	341 aa	Known RBP	4.04	□□□□□ -1.76
BCD1	YHR040W	NCB2	Q92317	146 aa		4.04	□□□□□ -1.76
BCD1	YHR040W	MET6	P05694	767 aa	Known RBP	4.03	□□□□□ -1.76
BCD1	YHR040W	MRP7	P12687	371 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	CLC1	P17891	233 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	NAR1	P23503	491 aa	Known RBP	4.03	□□□□□ -1.76
BCD1	YHR040W	MDJ1	P35191	511 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	OPY1	P38271	328 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	TAT2	P38967	592 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	TPO2	P53283	614 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	SOK2	P53438	785 aa	Predicted RBP	4.03	□□□□□ -1.76
BCD1	YHR040W	SPO1	P53541	631 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	CWC24	P53769	259 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	GIS4	Q04233	774 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	CSI1	Q04368	295 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	COG8	Q04632	607 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	PPM2	Q08282	695 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	OXR1	Q08952	273 aa		4.03	□□□□□ -1.76
BCD1	YHR040W	ROM2	P51862	1356 aa	Known RBP	4.02	□□□□□ -1.77
BCD1	YHR040W	NUP145	P49687	1317 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	RAD4	P14736	754 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	GCD7	P32502	381 aa	Predicted RBP	4.02	□□□□□ -1.77
BCD1	YHR040W	RFC1	P38630	861 aa	Known RBP	4.02	□□□□□ -1.77
BCD1	YHR040W	SNF7	P39929	240 aa	Known RBP	4.02	□□□□□ -1.77
BCD1	YHR040W	GIP2	P40036	548 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	ICP55	P40051	511 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	NUP82	P40368	713 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	NEO1	P40527	1151 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	MSH4	P40965	878 aa	Predicted RBP	4.02	□□□□□ -1.77
BCD1	YHR040W	YJR142W	P47173	342 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	HUL5	P53119	910 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	GUP1	P53154	560 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	YBP2	P53169	641 aa		4.02	□□□□□ -1.77
BCD1	YHR040W	BIO5	P53744	561 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 91.9 ms