RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	ADD66	P36040	267 aa		4.61	□□□□□ -1.67
PMI40	YER003C	ALO1	P54783	526 aa	Known RBP	4.61	□□□□□ -1.67
PMI40	YER003C	TAF8	Q03750	510 aa		4.61	□□□□□ -1.67
PMI40	YER003C	TIF35	Q04067	274 aa	Known RBP	4.61	□□□□□ -1.67
PMI40	YER003C	YMR074C	Q04773	145 aa		4.61	□□□□□ -1.67
PMI40	YER003C	ESC2	Q06340	456 aa		4.61	□□□□□ -1.67
PMI40	YER003C	NOP14	Q99207	810 aa	Known RBP	4.61	□□□□□ -1.67
PMI40	YER003C	AI3	P03877	415 aa		4.6	□□□□□ -1.67
PMI40	YER003C	MSH2	P25847	964 aa		4.6	□□□□□ -1.67
PMI40	YER003C	REI1	P38344	393 aa	Predicted RBP	4.6	□□□□□ -1.67
PMI40	YER003C	UBP12	P39538	1254 aa		4.6	□□□□□ -1.67
PMI40	YER003C	CNN1	P43618	361 aa		4.6	□□□□□ -1.67
PMI40	YER003C	BUD9	P53226	547 aa		4.6	□□□□□ -1.67
PMI40	YER003C	RKM2	Q03942	479 aa		4.6	□□□□□ -1.67
PMI40	YER003C	UTP5	Q04177	643 aa	Known RBP	4.6	□□□□□ -1.67
PMI40	YER003C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-DR6	P0CX70	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-ER1	P0CX71	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-LR2	P0CX72	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-PL	P0CX73	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-JR1	P0CX74	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-LR3	P0CX75	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-ML2	P0CX76	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	ERS1	P17261	260 aa		4.59	□□□□□ -1.67
PMI40	YER003C	DBP5	P20449	482 aa	Known RBP	4.59	□□□□□ -1.67
PMI40	YER003C	SRM1	P21827	482 aa		4.59	□□□□□ -1.67
PMI40	YER003C	RSC6	P25632	483 aa		4.59	□□□□□ -1.67
PMI40	YER003C	MOT2	P34909	587 aa	Known RBP	4.59	□□□□□ -1.67
PMI40	YER003C	ATG14	P38270	344 aa		4.59	□□□□□ -1.67
PMI40	YER003C	NEM1	P38757	446 aa		4.59	□□□□□ -1.67
PMI40	YER003C	ATG36	P46983	293 aa		4.59	□□□□□ -1.67
PMI40	YER003C	RTS3	P53289	263 aa		4.59	□□□□□ -1.67
PMI40	YER003C	DNM1	P54861	757 aa		4.59	□□□□□ -1.67
PMI40	YER003C	YOR223W	Q12015	292 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-GR1	Q12085	440 aa		4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-NL1	Q12391	440 aa	Known RBP	4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.59	□□□□□ -1.67
PMI40	YER003C	TY1A-OL	Q92392	440 aa	Known RBP	4.59	□□□□□ -1.67
PMI40	YER003C	DED1	P06634	604 aa	Known RBP	4.58	□□□□□ -1.68
PMI40	YER003C	YKL107W	P34251	309 aa		4.58	□□□□□ -1.68
PMI40	YER003C	SLS1	P42900	643 aa		4.58	□□□□□ -1.68
PMI40	YER003C	ALR2	P43553	858 aa		4.58	□□□□□ -1.68
PMI40	YER003C	RTA1	P53047	317 aa		4.58	□□□□□ -1.68
PMI40	YER003C	KIP3	P53086	805 aa	Known RBP	4.58	□□□□□ -1.68
PMI40	YER003C	UGO1	Q03327	502 aa		4.58	□□□□□ -1.68
PMI40	YER003C	YDL124W	Q07551	312 aa	Known RBP	4.58	□□□□□ -1.68
PMI40	YER003C	CRP1	P38845	465 aa	Known RBP	4.57	□□□□□ -1.68
PMI40	YER003C	MPH1	P40562	993 aa		4.57	□□□□□ -1.68
PMI40	YER003C	YGL176C	P46945	554 aa		4.57	□□□□□ -1.68
PMI40	YER003C	YJR008W	P47085	338 aa		4.57	□□□□□ -1.68
PMI40	YER003C	ARI1	P53111	347 aa	Known RBP	4.57	□□□□□ -1.68
PMI40	YER003C	RAT1	Q02792	1006 aa	Known RBP	4.57	□□□□□ -1.68
PMI40	YER003C	YPL034W	Q03083	165 aa		4.57	□□□□□ -1.68
PMI40	YER003C	YPL066W	Q12194	479 aa		4.57	□□□□□ -1.68
PMI40	YER003C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PMI40	YER003C	RGD1	P38339	666 aa		4.56	□□□□□ -1.68
PMI40	YER003C	HSE1	P38753	452 aa		4.56	□□□□□ -1.68
PMI40	YER003C	MBP1	P39678	833 aa		4.56	□□□□□ -1.68
PMI40	YER003C	HNT2	P49775	206 aa		4.56	□□□□□ -1.68
PMI40	YER003C	NCE103	P53615	221 aa		4.56	□□□□□ -1.68
PMI40	YER003C	DOT1	Q04089	582 aa	Known RBP	4.56	□□□□□ -1.68
PMI40	YER003C	AOS1	Q06624	347 aa		4.56	□□□□□ -1.68
PMI40	YER003C	GAS5	Q08193	484 aa		4.56	□□□□□ -1.68
PMI40	YER003C	NTG2	Q08214	380 aa		4.56	□□□□□ -1.68
PMI40	YER003C	AVO1	Q08236	1176 aa		4.56	□□□□□ -1.68
PMI40	YER003C	LAP2	Q10740	671 aa		4.56	□□□□□ -1.68
PMI40	YER003C	RPL8A	P17076	256 aa	Known RBP	4.55	□□□□□ -1.68
PMI40	YER003C	SFP1	P32432	683 aa		4.55	□□□□□ -1.68
PMI40	YER003C	CDC11	P32458	415 aa		4.55	□□□□□ -1.68
PMI40	YER003C	AFG2	P32794	780 aa		4.55	□□□□□ -1.68
PMI40	YER003C	BET3	P36149	193 aa		4.55	□□□□□ -1.68
PMI40	YER003C	GDH3	P39708	457 aa		4.55	□□□□□ -1.68
PMI40	YER003C	GEM1	P39722	662 aa		4.55	□□□□□ -1.68
PMI40	YER003C	NOP2	P40991	618 aa	Known RBP	4.55	□□□□□ -1.68
PMI40	YER003C	YNR029C	P53729	429 aa	Known RBP	4.55	□□□□□ -1.68
PMI40	YER003C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PMI40	YER003C	ADR1	P07248	1323 aa		4.54	□□□□□ -1.68
PMI40	YER003C	HBS1	P32769	611 aa	Known RBP	4.54	□□□□□ -1.68
PMI40	YER003C	PEX6	P33760	1030 aa		4.54	□□□□□ -1.68
PMI40	YER003C	OMA1	P36163	345 aa		4.54	□□□□□ -1.68
PMI40	YER003C	MCM7	P38132	845 aa		4.54	□□□□□ -1.68
PMI40	YER003C	YAR028W	P39548	234 aa		4.54	□□□□□ -1.68
PMI40	YER003C	YEN1	P40028	759 aa		4.54	□□□□□ -1.68
PMI40	YER003C	HSV2	P50079	448 aa	Predicted RBP	4.54	□□□□□ -1.68
PMI40	YER003C	ZDS1	P50111	915 aa	Known RBP	4.54	□□□□□ -1.68
PMI40	YER003C	YGR045C	P53229	120 aa		4.54	□□□□□ -1.68
PMI40	YER003C	TPO2	P53283	614 aa		4.54	□□□□□ -1.68
PMI40	YER003C	ALG6	Q12001	544 aa	Known RBP	4.54	□□□□□ -1.68
PMI40	YER003C	GNT1	Q12096	491 aa		4.54	□□□□□ -1.68
PMI40	YER003C	HBN1	Q96VH4	193 aa		4.54	□□□□□ -1.68
PMI40	YER003C	NNK1	P36003	928 aa		4.53	□□□□□ -1.68
PMI40	YER003C	ALG3	P38179	458 aa		4.53	□□□□□ -1.68
PMI40	YER003C	CCC2	P38995	1004 aa		4.53	□□□□□ -1.68
PMI40	YER003C	NUG1	P40010	520 aa	Known RBP	4.53	□□□□□ -1.68
PMI40	YER003C	SIP5	P40210	489 aa	Known RBP	4.53	□□□□□ -1.68
PMI40	YER003C	VPS53	P47061	822 aa		4.53	□□□□□ -1.68
PMI40	YER003C	MAL11	P53048	616 aa		4.53	□□□□□ -1.68
PMI40	YER003C	GIC2	Q06648	383 aa		4.53	□□□□□ -1.68
PMI40	YER003C	PTC5	Q12511	572 aa		4.53	□□□□□ -1.68
PMI40	YER003C	MRC1	P25588	1096 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms