RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C RER2P35196 286 aa6.82□□□□□ -1.32
TCA17YEL048C LRG1P35688 1017 aa6.82□□□□□ -1.32
TCA17YEL048C RPN3P40016 523 aaKnown RBP6.82□□□□□ -1.32
TCA17YEL048C LPX1Q12405 387 aaKnown RBP6.82□□□□□ -1.32
TCA17YEL048C PUF4P25339 888 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
TCA17YEL048C MLS1P30952 554 aa6.81□□□□□ -1.32
TCA17YEL048C MCM7P38132 845 aa6.81□□□□□ -1.32
TCA17YEL048C SVF1Q05515 481 aa6.81□□□□□ -1.32
TCA17YEL048C RSC58Q07979 502 aa6.81□□□□□ -1.32
TCA17YEL048C RSB1Q08417 382 aa6.81□□□□□ -1.32
TCA17YEL048C MAD1P40957 749 aa6.8□□□□□ -1.32
TCA17YEL048C HNT2P49775 206 aa6.8□□□□□ -1.32
TCA17YEL048C SPS1P08458 490 aa6.79□□□□□ -1.32
TCA17YEL048C CLN2P20438 545 aa6.79□□□□□ -1.32
TCA17YEL048C AOS1Q06624 347 aa6.79□□□□□ -1.32
TCA17YEL048C LYP1P32487 611 aa6.78□□□□□ -1.32
TCA17YEL048C SEG2P34250 1132 aa6.78□□□□□ -1.32
TCA17YEL048C IRC24P40580 263 aa6.78□□□□□ -1.32
TCA17YEL048C TIF35Q04067 274 aaKnown RBP6.78□□□□□ -1.32
TCA17YEL048C JIP5Q06214 492 aaPredicted RBP6.78□□□□□ -1.32
TCA17YEL048C TRP2P00899 507 aaKnown RBP6.77□□□□□ -1.33
TCA17YEL048C DUT1P33317 147 aa6.77□□□□□ -1.33
TCA17YEL048C BAP2P38084 609 aa6.77□□□□□ -1.33
TCA17YEL048C PIK1P39104 1066 aa6.77□□□□□ -1.33
TCA17YEL048C MET10P39692 1035 aa6.77□□□□□ -1.33
TCA17YEL048C MPH1P40562 993 aa6.77□□□□□ -1.33
TCA17YEL048C TYW3P53177 273 aa6.77□□□□□ -1.33
TCA17YEL048C RCL1Q08096 367 aaPredicted RBP6.77□□□□□ -1.33
TCA17YEL048C YER152CP10356 443 aa6.76□□□□□ -1.33
TCA17YEL048C ELM1P32801 640 aa6.76□□□□□ -1.33
TCA17YEL048C PRP43P53131 767 aaKnown RBP6.76□□□□□ -1.33
TCA17YEL048C CWC24P53769 259 aa6.76□□□□□ -1.33
TCA17YEL048C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
TCA17YEL048C GAS1P22146 559 aaKnown RBP6.75□□□□□ -1.33
TCA17YEL048C ENV11P53246 860 aa6.75□□□□□ -1.33
TCA17YEL048C EEB1Q02891 456 aa6.75□□□□□ -1.33
TCA17YEL048C SPO20Q04359 397 aa6.75□□□□□ -1.33
TCA17YEL048C GNT1Q12096 491 aa6.75□□□□□ -1.33
TCA17YEL048C SNF5P18480 905 aa6.74□□□□□ -1.33
TCA17YEL048C ETP1P38748 585 aaKnown RBP6.74□□□□□ -1.33
TCA17YEL048C GDE1Q02979 1223 aa6.74□□□□□ -1.33
TCA17YEL048C NIT1P40447 199 aa6.73□□□□□ -1.33
TCA17YEL048C KRI1P42846 591 aaKnown RBP6.73□□□□□ -1.33
TCA17YEL048C PIN2Q12057 282 aa6.73□□□□□ -1.33
TCA17YEL048C INO1P11986 533 aa6.72□□□□□ -1.33
TCA17YEL048C RNQ1P25367 405 aa6.72□□□□□ -1.33
TCA17YEL048C SNF7P39929 240 aaKnown RBP6.72□□□□□ -1.33
TCA17YEL048C SEC26P41810 973 aaKnown RBP6.72□□□□□ -1.33
TCA17YEL048C SPP382Q06411 708 aaPredicted RBP6.72□□□□□ -1.33
TCA17YEL048C YOR352WQ08816 343 aa6.72□□□□□ -1.33
TCA17YEL048C RKM4Q12504 494 aa6.72□□□□□ -1.33
TCA17YEL048C MOT2P34909 587 aaKnown RBP6.71□□□□□ -1.34
TCA17YEL048C FAA4P47912 694 aaKnown RBP6.71□□□□□ -1.34
TCA17YEL048C YGR053CP53234 283 aa6.71□□□□□ -1.34
TCA17YEL048C SNO2P53823 222 aa6.71□□□□□ -1.34
TCA17YEL048C MRPL22P53881 309 aa6.71□□□□□ -1.34
TCA17YEL048C VPS16Q03308 798 aa6.71□□□□□ -1.34
TCA17YEL048C YKL107WP34251 309 aa6.7□□□□□ -1.34
TCA17YEL048C YFL054CP43549 646 aa6.7□□□□□ -1.34
TCA17YEL048C RPL11AP0C0W9 174 aaKnown RBP6.69□□□□□ -1.34
TCA17YEL048C BAS1P22035 811 aa6.69□□□□□ -1.34
TCA17YEL048C YLR225CQ05948 407 aaKnown RBP6.69□□□□□ -1.34
TCA17YEL048C FAL1Q12099 399 aaKnown RBP6.69□□□□□ -1.34
TCA17YEL048C YDL177CQ12257 170 aa6.69□□□□□ -1.34
TCA17YEL048C RPL11BQ3E757 174 aaPredicted RBP6.69□□□□□ -1.34
TCA17YEL048C RFC5P38251 354 aa6.68□□□□□ -1.34
TCA17YEL048C MXR1P40029 184 aa6.68□□□□□ -1.34
TCA17YEL048C YGL176CP46945 554 aa6.68□□□□□ -1.34
TCA17YEL048C ACM1Q08981 209 aa6.68□□□□□ -1.34
TCA17YEL048C THS1P04801 734 aaKnown RBP6.67□□□□□ -1.34
TCA17YEL048C UGA2P38067 497 aa6.67□□□□□ -1.34
TCA17YEL048C GEM1P39722 662 aa6.67□□□□□ -1.34
TCA17YEL048C UBP5P39944 805 aa6.67□□□□□ -1.34
TCA17YEL048C RSM24Q03976 319 aa6.67□□□□□ -1.34
TCA17YEL048C SVS1Q12254 260 aa6.67□□□□□ -1.34
TCA17YEL048C TSA1P34760 196 aaKnown RBP6.66□□□□□ -1.34
TCA17YEL048C CDA2Q06703 312 aa6.66□□□□□ -1.34
TCA17YEL048C PIN4P34217 668 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
TCA17YEL048C PNT1P38969 423 aa6.65□□□□□ -1.34
TCA17YEL048C VAC8P39968 578 aa6.65□□□□□ -1.34
TCA17YEL048C YPL066WQ12194 479 aa6.65□□□□□ -1.34
TCA17YEL048C KIN2P13186 1147 aaKnown RBP6.64□□□□□ -1.35
TCA17YEL048C DBP2P24783 546 aaKnown RBP6.64□□□□□ -1.35
TCA17YEL048C ABD1P32783 436 aaPredicted RBP6.64□□□□□ -1.35
TCA17YEL048C PAM1P37304 830 aaKnown RBP6.64□□□□□ -1.35
TCA17YEL048C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
TCA17YEL048C CYC1P00044 109 aaPredicted RBP6.63□□□□□ -1.35
TCA17YEL048C APL1P27351 700 aa6.63□□□□□ -1.35
TCA17YEL048C AIM3P38266 947 aaKnown RBP6.63□□□□□ -1.35
TCA17YEL048C NOP7P53261 605 aaKnown RBP6.63□□□□□ -1.35
TCA17YEL048C ALD6P54115 500 aaKnown RBP6.63□□□□□ -1.35
TCA17YEL048C SGD1Q06132 899 aa6.63□□□□□ -1.35
TCA17YEL048C ESC2Q06340 456 aa6.63□□□□□ -1.35
TCA17YEL048C ATG13Q06628 738 aa6.63□□□□□ -1.35
TCA17YEL048C SBA1P28707 216 aaKnown RBP6.62□□□□□ -1.35
TCA17YEL048C OPI10Q08202 246 aa6.62□□□□□ -1.35
TCA17YEL048C PRP6P19735 899 aaPredicted RBP6.61□□□□□ -1.35
TCA17YEL048C PRI2P20457 528 aa6.61□□□□□ -1.35
TCA17YEL048C AGP1P25376 633 aa6.61□□□□□ -1.35
TCA17YEL048C SLA2P33338 968 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms