RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	YGL138C	P53122	345 aa		7.33	□□□□□ -1.24
VMA3	YEL027W	PIL1	P53252	339 aa	Known RBP	7.33	□□□□□ -1.24
VMA3	YEL027W	FAR11	P53917	953 aa		7.33	□□□□□ -1.24
VMA3	YEL027W	YMR321C	Q04898	105 aa		7.33	□□□□□ -1.24
VMA3	YEL027W	VIP1	Q06685	1146 aa	Known RBP	7.33	□□□□□ -1.24
VMA3	YEL027W	MAK11	P20484	414 aa	Known RBP	7.32	□□□□□ -1.24
VMA3	YEL027W	VPS1	P21576	704 aa	Known RBP	7.32	□□□□□ -1.24
VMA3	YEL027W	PWP2	P25635	923 aa	Known RBP	7.32	□□□□□ -1.24
VMA3	YEL027W	ELM1	P32801	640 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	AVT3	P36062	692 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	DJP1	P40564	432 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	ASE1	P50275	885 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	NAF1	P53919	492 aa	Known RBP	7.32	□□□□□ -1.24
VMA3	YEL027W	DAK1	P54838	584 aa	Known RBP	7.32	□□□□□ -1.24
VMA3	YEL027W	YVH1	Q02256	364 aa	Known RBP	7.32	□□□□□ -1.24
VMA3	YEL027W	HAP5	Q02516	242 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	COG8	Q04632	607 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	DCS2	Q12123	353 aa		7.32	□□□□□ -1.24
VMA3	YEL027W	HEM1	P09950	548 aa	Predicted RBP	7.31	□□□□□ -1.24
VMA3	YEL027W	MIP1	P15801	1254 aa		7.31	□□□□□ -1.24
VMA3	YEL027W	MSP1	P28737	362 aa		7.31	□□□□□ -1.24
VMA3	YEL027W	PTA1	Q01329	785 aa	Predicted RBP	7.31	□□□□□ -1.24
VMA3	YEL027W	GIS4	Q04233	774 aa		7.31	□□□□□ -1.24
VMA3	YEL027W	PEX19	Q07418	342 aa		7.31	□□□□□ -1.24
VMA3	YEL027W	GET3	Q12154	354 aa	Known RBP	7.31	□□□□□ -1.24
VMA3	YEL027W	RTP1	Q12751	981 aa		7.31	□□□□□ -1.24
VMA3	YEL027W	NBL1	Q3E7Y6	73 aa		7.31	□□□□□ -1.24
VMA3	YEL027W	MBR1	P23493	339 aa		7.3	□□□□□ -1.24
VMA3	YEL027W	UGA4	P32837	571 aa		7.3	□□□□□ -1.24
VMA3	YEL027W	RET3	P53600	189 aa		7.3	□□□□□ -1.24
VMA3	YEL027W	YLR326W	Q06170	240 aa	Known RBP	7.3	□□□□□ -1.24
VMA3	YEL027W	SMD2	Q06217	110 aa	Known RBP	7.3	□□□□□ -1.24
VMA3	YEL027W	KEX1	P09620	729 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	SAS3	P34218	831 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	PAN5	P38787	379 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	CIR1	P42940	261 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	CTR1	P49573	406 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	BNI5	P53890	448 aa	Known RBP	7.29	□□□□□ -1.24
VMA3	YEL027W	CSM3	Q04659	317 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	TIP41	Q12199	356 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	LDB19	Q12502	818 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	YDR524C-B	Q3E6R4	66 aa		7.29	□□□□□ -1.24
VMA3	YEL027W	HXK1	P04806	485 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	SES1	P07284	462 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	SNA3	P14359	133 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	THR4	P16120	514 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	GRS1	P38088	690 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	FLR1	P38124	548 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	RFT1	P38206	574 aa	Predicted RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	MSC7	P38694	644 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	CCT5	P40413	562 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	RTC4	P53850	401 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	EIS1	Q05050	843 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	ETT1	Q08421	412 aa	Known RBP	7.28	□□□□□ -1.24
VMA3	YEL027W	YOR296W	Q08748	1289 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	AIM44	Q99299	758 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	MYO1	P08964	1928 aa		7.28	□□□□□ -1.24
VMA3	YEL027W	MAS2	P11914	482 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	RGP1	P16664	663 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	ROX1	P25042	368 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	SRO9	P25567	434 aa	Known RBP	7.27	□□□□□ -1.25
VMA3	YEL027W	SUL1	P38359	859 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	SNF7	P39929	240 aa	Known RBP	7.27	□□□□□ -1.25
VMA3	YEL027W	RSM25	P40496	264 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	RPS7B	P48164	190 aa	Known RBP	7.27	□□□□□ -1.25
VMA3	YEL027W	UBP15	P50101	1230 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	VPS72	Q03388	795 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	TRS120	Q04183	1289 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	SLK19	Q08581	821 aa	Known RBP	7.27	□□□□□ -1.25
VMA3	YEL027W	APC11	Q12157	165 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	YLL058W	Q12198	575 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	AHC1	Q12433	566 aa		7.27	□□□□□ -1.25
VMA3	YEL027W	DDP1	Q99321	188 aa	Known RBP	7.27	□□□□□ -1.25
VMA3	YEL027W	YPR117W	Q06116	2489 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	HIP1	P06775	603 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	FRS2	P15625	503 aa	Known RBP	7.26	□□□□□ -1.25
VMA3	YEL027W	ALG1	P16661	449 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	MCM3	P24279	971 aa	Known RBP	7.26	□□□□□ -1.25
VMA3	YEL027W	ARL1	P38116	183 aa	Known RBP	7.26	□□□□□ -1.25
VMA3	YEL027W	STT3	P39007	718 aa	Known RBP	7.26	□□□□□ -1.25
VMA3	YEL027W	HUL5	P53119	910 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	DSE4	P53753	1117 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	MSC2	Q03455	724 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	OXR1	Q08952	273 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	PTC5	Q12511	572 aa		7.26	□□□□□ -1.25
VMA3	YEL027W	CLC1	P17891	233 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	URA1	P28272	314 aa	Predicted RBP	7.25	□□□□□ -1.25
VMA3	YEL027W	CLB5	P30283	435 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	DUR3	P33413	735 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	HMF1	P40037	129 aa	Known RBP	7.25	□□□□□ -1.25
VMA3	YEL027W	CUE3	P53137	624 aa	Known RBP	7.25	□□□□□ -1.25
VMA3	YEL027W	YML020W	Q03722	664 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	MMR1	Q06324	491 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	ARP6	Q12509	438 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	ATG11	Q12527	1178 aa		7.25	□□□□□ -1.25
VMA3	YEL027W	RPL22A	P05749	121 aa	Known RBP	7.24	□□□□□ -1.25
VMA3	YEL027W	POT1	P27796	417 aa	Known RBP RIP-Chip data	7.24	□□□□□ -1.25	not detected
VMA3	YEL027W	ORC6	P38826	435 aa		7.24	□□□□□ -1.25
VMA3	YEL027W	ATG32	P40458	529 aa		7.24	□□□□□ -1.25
VMA3	YEL027W	DAK2	P43550	591 aa		7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 2147.1 ms