RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C POL12P38121 705 aaPredicted RBP6.44□□□□□ -1.38
RRI1YDL216C TIF35Q04067 274 aaKnown RBP6.44□□□□□ -1.38
RRI1YDL216C SEG2P34250 1132 aa6.43□□□□□ -1.38
RRI1YDL216C SNF7P39929 240 aaKnown RBP6.43□□□□□ -1.38
RRI1YDL216C YJL045WP47052 634 aa6.43□□□□□ -1.38
RRI1YDL216C DFG16Q99234 619 aa6.43□□□□□ -1.38
RRI1YDL216C RNQ1P25367 405 aa6.42□□□□□ -1.38
RRI1YDL216C RPN3P40016 523 aaKnown RBP6.42□□□□□ -1.38
RRI1YDL216C MPH1P40562 993 aa6.42□□□□□ -1.38
RRI1YDL216C FAL1Q12099 399 aaKnown RBP6.42□□□□□ -1.38
RRI1YDL216C SPO21Q12411 609 aa6.42□□□□□ -1.38
RRI1YDL216C MLS1P30952 554 aa6.41□□□□□ -1.38
RRI1YDL216C MCM7P38132 845 aa6.41□□□□□ -1.38
RRI1YDL216C YHL012WP38709 493 aa6.41□□□□□ -1.38
RRI1YDL216C NMD3P38861 518 aaKnown RBP6.41□□□□□ -1.38
RRI1YDL216C ECL1P48235 211 aa6.41□□□□□ -1.38
RRI1YDL216C RKM4Q12504 494 aa6.41□□□□□ -1.38
RRI1YDL216C YSC84P32793 468 aa6.4□□□□□ -1.39
RRI1YDL216C TRE1Q08919 783 aa6.4□□□□□ -1.39
RRI1YDL216C GNT1Q12096 491 aa6.4□□□□□ -1.39
RRI1YDL216C COQ4O13525 335 aa6.39□□□□□ -1.39
RRI1YDL216C INO1P11986 533 aa6.39□□□□□ -1.39
RRI1YDL216C SRO9P25567 434 aaKnown RBP6.39□□□□□ -1.39
RRI1YDL216C MDL2P33311 773 aa6.39□□□□□ -1.39
RRI1YDL216C HSP78P33416 811 aa6.39□□□□□ -1.39
RRI1YDL216C GPB2P39717 880 aa6.39□□□□□ -1.39
RRI1YDL216C TNA1P53322 534 aa6.39□□□□□ -1.39
RRI1YDL216C HOS3Q02959 697 aaKnown RBP6.39□□□□□ -1.39
RRI1YDL216C OPI10Q08202 246 aa6.39□□□□□ -1.39
RRI1YDL216C WRS1Q12109 432 aaKnown RBP6.39□□□□□ -1.39
RRI1YDL216C BAS1P22035 811 aa6.38□□□□□ -1.39
RRI1YDL216C ADP1P25371 1049 aa6.38□□□□□ -1.39
RRI1YDL216C AGP1P25376 633 aa6.38□□□□□ -1.39
RRI1YDL216C PEX7P39108 375 aa6.38□□□□□ -1.39
RRI1YDL216C UBP5P39944 805 aa6.38□□□□□ -1.39
RRI1YDL216C SSY1Q03770 852 aa6.38□□□□□ -1.39
RRI1YDL216C SAM35P14693 329 aa6.37□□□□□ -1.39
RRI1YDL216C PUF4P25339 888 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
RRI1YDL216C SBA1P28707 216 aaKnown RBP6.37□□□□□ -1.39
RRI1YDL216C YKL107WP34251 309 aa6.37□□□□□ -1.39
RRI1YDL216C CCZ1P38273 704 aa6.37□□□□□ -1.39
RRI1YDL216C YLR225CQ05948 407 aaKnown RBP6.37□□□□□ -1.39
RRI1YDL216C NBA1Q08229 501 aaKnown RBP6.37□□□□□ -1.39
RRI1YDL216C YER152CP10356 443 aa6.36□□□□□ -1.39
RRI1YDL216C PIN4P34217 668 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
RRI1YDL216C MOT2P34909 587 aaKnown RBP6.36□□□□□ -1.39
RRI1YDL216C BAP2P38084 609 aa6.36□□□□□ -1.39
RRI1YDL216C NIT1P40447 199 aa6.36□□□□□ -1.39
RRI1YDL216C SSF2Q12153 453 aaPredicted RBP6.36□□□□□ -1.39
RRI1YDL216C PRI2P20457 528 aa6.35□□□□□ -1.39
RRI1YDL216C PRO1P32264 428 aa6.35□□□□□ -1.39
RRI1YDL216C YGL176CP46945 554 aa6.35□□□□□ -1.39
RRI1YDL216C ORC3P54790 616 aa6.35□□□□□ -1.39
RRI1YDL216C SHE9Q04172 456 aa6.35□□□□□ -1.39
RRI1YDL216C SPP382Q06411 708 aaPredicted RBP6.35□□□□□ -1.39
RRI1YDL216C ABD1P32783 436 aaPredicted RBP6.34□□□□□ -1.39
RRI1YDL216C PIK1P39104 1066 aa6.34□□□□□ -1.39
RRI1YDL216C TDA5Q06417 326 aaKnown RBP6.34□□□□□ -1.39
RRI1YDL216C SNF5P18480 905 aa6.33□□□□□ -1.4
RRI1YDL216C GAS1P22146 559 aaKnown RBP6.33□□□□□ -1.4
RRI1YDL216C PTC7P38797 343 aa6.33□□□□□ -1.4
RRI1YDL216C YJL049WP47048 450 aa6.33□□□□□ -1.4
RRI1YDL216C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4 RIP-Chip
RRI1YDL216C RSC58Q07979 502 aa6.33□□□□□ -1.4
RRI1YDL216C YPL066WQ12194 479 aa6.33□□□□□ -1.4
RRI1YDL216C LPX1Q12405 387 aaKnown RBP6.33□□□□□ -1.4
RRI1YDL216C YKL069WP36088 180 aa6.32□□□□□ -1.4
RRI1YDL216C SPF1P39986 1215 aaKnown RBP6.32□□□□□ -1.4
RRI1YDL216C GTS1P40956 396 aa6.32□□□□□ -1.4
RRI1YDL216C NNF1P47149 201 aa6.32□□□□□ -1.4
RRI1YDL216C ESC2Q06340 456 aa6.32□□□□□ -1.4
RRI1YDL216C RPL11AP0C0W9 174 aaKnown RBP6.31□□□□□ -1.4
RRI1YDL216C MRP8P35719 219 aa6.31□□□□□ -1.4
RRI1YDL216C PNT1P38969 423 aa6.31□□□□□ -1.4
RRI1YDL216C PRP43P53131 767 aaKnown RBP6.31□□□□□ -1.4
RRI1YDL216C RSB1Q08417 382 aa6.31□□□□□ -1.4
RRI1YDL216C RPL11BQ3E757 174 aaPredicted RBP6.31□□□□□ -1.4
RRI1YDL216C TSA1P34760 196 aaKnown RBP6.3□□□□□ -1.4
RRI1YDL216C VBA5P36172 582 aa6.3□□□□□ -1.4
RRI1YDL216C GEM1P39722 662 aa6.3□□□□□ -1.4
RRI1YDL216C CDA2Q06703 312 aa6.3□□□□□ -1.4
RRI1YDL216C RCL1Q08096 367 aaPredicted RBP6.3□□□□□ -1.4
RRI1YDL216C ACM1Q08981 209 aa6.3□□□□□ -1.4
RRI1YDL216C THS1P04801 734 aaKnown RBP6.29□□□□□ -1.4
RRI1YDL216C AIM26P32858 118 aa6.29□□□□□ -1.4
RRI1YDL216C SIP5P40210 489 aaKnown RBP6.29□□□□□ -1.4
RRI1YDL216C FOL2P51601 243 aaKnown RBP6.29□□□□□ -1.4
RRI1YDL216C NAN1Q02931 896 aaKnown RBP6.29□□□□□ -1.4
RRI1YDL216C GRX1P25373 110 aaKnown RBP6.28□□□□□ -1.4
RRI1YDL216C PBY1P38254 753 aa6.28□□□□□ -1.4
RRI1YDL216C MXR1P40029 184 aa6.28□□□□□ -1.4
RRI1YDL216C IRR1P40541 1150 aa6.28□□□□□ -1.4
RRI1YDL216C ENV11P53246 860 aa6.28□□□□□ -1.4
RRI1YDL216C SPS1P08458 490 aa6.27□□□□□ -1.41
RRI1YDL216C DBP2P24783 546 aaKnown RBP6.26□□□□□ -1.41
RRI1YDL216C SCT1P32784 759 aa6.26□□□□□ -1.41
RRI1YDL216C UGA2P38067 497 aa6.26□□□□□ -1.41
RRI1YDL216C SLA2P33338 968 aa6.25□□□□□ -1.41
RRI1YDL216C MBP1P39678 833 aa6.25□□□□□ -1.41
RRI1YDL216C SEC26P41810 973 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms