RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	INP52	P50942	1183 aa		4.74	□□□□□ -1.65
PBP4	YDL053C	INO1	P11986	533 aa		4.73	□□□□□ -1.65
PBP4	YDL053C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
PBP4	YDL053C	PRO1	P32264	428 aa		4.73	□□□□□ -1.65
PBP4	YDL053C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	RIP-Chip
PBP4	YDL053C	MAC1	P35192	417 aa		4.73	□□□□□ -1.65
PBP4	YDL053C	SEA4	P38164	1038 aa		4.73	□□□□□ -1.65
PBP4	YDL053C	CTH1	P47976	325 aa		4.73	□□□□□ -1.65
PBP4	YDL053C	FAL1	Q12099	399 aa	Known RBP	4.73	□□□□□ -1.65
PBP4	YDL053C	YER152C	P10356	443 aa		4.72	□□□□□ -1.65
PBP4	YDL053C	LIP5	P32875	414 aa		4.72	□□□□□ -1.65
PBP4	YDL053C	RPN3	P40016	523 aa	Known RBP	4.72	□□□□□ -1.65
PBP4	YDL053C	SSY1	Q03770	852 aa		4.72	□□□□□ -1.65
PBP4	YDL053C	SPO20	Q04359	397 aa		4.72	□□□□□ -1.65
PBP4	YDL053C	YLR225C	Q05948	407 aa	Known RBP	4.72	□□□□□ -1.65
PBP4	YDL053C	ESC2	Q06340	456 aa		4.72	□□□□□ -1.65
PBP4	YDL053C	BRE4	Q07660	1125 aa		4.72	□□□□□ -1.65
PBP4	YDL053C	COQ4	O13525	335 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	PRI2	P20457	528 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	BAS1	P22035	811 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	SRO9	P25567	434 aa	Known RBP	4.71	□□□□□ -1.66
PBP4	YDL053C	MDL2	P33311	773 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	PTC7	P38797	343 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	GTS1	P40956	396 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	TNA1	P53322	534 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	HOS3	Q02959	697 aa	Known RBP	4.71	□□□□□ -1.66
PBP4	YDL053C	RCL1	Q08096	367 aa	Predicted RBP	4.71	□□□□□ -1.66
PBP4	YDL053C	GNT1	Q12096	491 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	YPL066W	Q12194	479 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	RKM4	Q12504	494 aa		4.71	□□□□□ -1.66
PBP4	YDL053C	ADP1	P25371	1049 aa		4.7	□□□□□ -1.66
PBP4	YDL053C	ABD1	P32783	436 aa	Predicted RBP	4.7	□□□□□ -1.66
PBP4	YDL053C	YKL107W	P34251	309 aa		4.7	□□□□□ -1.66
PBP4	YDL053C	YKL069W	P36088	180 aa		4.7	□□□□□ -1.66
PBP4	YDL053C	OPI10	Q08202	246 aa		4.7	□□□□□ -1.66
PBP4	YDL053C	SNF5	P18480	905 aa		4.69	□□□□□ -1.66
PBP4	YDL053C	BAP2	P38084	609 aa		4.69	□□□□□ -1.66
PBP4	YDL053C	YFL054C	P43549	646 aa		4.69	□□□□□ -1.66
PBP4	YDL053C	YGL176C	P46945	554 aa		4.69	□□□□□ -1.66
PBP4	YDL053C	RSC58	Q07979	502 aa		4.69	□□□□□ -1.66
PBP4	YDL053C	LPX1	Q12405	387 aa	Known RBP	4.69	□□□□□ -1.66
PBP4	YDL053C	AGP1	P25376	633 aa		4.68	□□□□□ -1.66
PBP4	YDL053C	CCZ1	P38273	704 aa		4.68	□□□□□ -1.66
PBP4	YDL053C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
PBP4	YDL053C	SSF2	Q12153	453 aa	Predicted RBP	4.68	□□□□□ -1.66
PBP4	YDL053C	RPL11A	P0C0W9	174 aa	Known RBP	4.67	□□□□□ -1.66
PBP4	YDL053C	SBA1	P28707	216 aa	Known RBP	4.67	□□□□□ -1.66
PBP4	YDL053C	AIM26	P32858	118 aa		4.67	□□□□□ -1.66
PBP4	YDL053C	HSP78	P33416	811 aa		4.67	□□□□□ -1.66
PBP4	YDL053C	PIK1	P39104	1066 aa		4.67	□□□□□ -1.66
PBP4	YDL053C	KRI1	P42846	591 aa	Known RBP	4.67	□□□□□ -1.66
PBP4	YDL053C	SPP382	Q06411	708 aa	Predicted RBP	4.67	□□□□□ -1.66
PBP4	YDL053C	NBA1	Q08229	501 aa	Known RBP	4.67	□□□□□ -1.66
PBP4	YDL053C	RPL11B	Q3E757	174 aa	Predicted RBP	4.67	□□□□□ -1.66
PBP4	YDL053C	DBP2	P24783	546 aa	Known RBP	4.66	□□□□□ -1.66
PBP4	YDL053C	PNT1	P38969	423 aa		4.66	□□□□□ -1.66
PBP4	YDL053C	SPF1	P39986	1215 aa	Known RBP	4.66	□□□□□ -1.66
PBP4	YDL053C	MXR1	P40029	184 aa		4.66	□□□□□ -1.66
PBP4	YDL053C	SIP5	P40210	489 aa	Known RBP	4.66	□□□□□ -1.66
PBP4	YDL053C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
PBP4	YDL053C	VBA5	P36172	582 aa		4.65	□□□□□ -1.67
PBP4	YDL053C	SNF7	P39929	240 aa	Known RBP	4.65	□□□□□ -1.67
PBP4	YDL053C	ORC3	P54790	616 aa		4.65	□□□□□ -1.67
PBP4	YDL053C	SHE9	Q04172	456 aa		4.65	□□□□□ -1.67
PBP4	YDL053C	TDA5	Q06417	326 aa	Known RBP	4.65	□□□□□ -1.67
PBP4	YDL053C	WRS1	Q12109	432 aa	Known RBP	4.65	□□□□□ -1.67
PBP4	YDL053C	SPS1	P08458	490 aa		4.64	□□□□□ -1.67
PBP4	YDL053C	SLA2	P33338	968 aa		4.64	□□□□□ -1.67
PBP4	YDL053C	POL12	P38121	705 aa	Predicted RBP	4.64	□□□□□ -1.67
PBP4	YDL053C	MBP1	P39678	833 aa		4.64	□□□□□ -1.67
PBP4	YDL053C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
PBP4	YDL053C	RSB1	Q08417	382 aa		4.64	□□□□□ -1.67
PBP4	YDL053C	ACM1	Q08981	209 aa		4.64	□□□□□ -1.67
PBP4	YDL053C	LRG1	P35688	1017 aa		4.63	□□□□□ -1.67
PBP4	YDL053C	UGA2	P38067	497 aa		4.63	□□□□□ -1.67
PBP4	YDL053C	DFG16	Q99234	619 aa		4.63	□□□□□ -1.67
PBP4	YDL053C	GRX1	P25373	110 aa	Known RBP	4.62	□□□□□ -1.67
PBP4	YDL053C	MRP8	P35719	219 aa		4.62	□□□□□ -1.67
PBP4	YDL053C	GEM1	P39722	662 aa		4.62	□□□□□ -1.67
PBP4	YDL053C	FOL2	P51601	243 aa	Known RBP	4.62	□□□□□ -1.67
PBP4	YDL053C	BI4	P03879	638 aa		4.61	□□□□□ -1.67
PBP4	YDL053C	STE5	P32917	917 aa		4.61	□□□□□ -1.67
PBP4	YDL053C	ABZ1	P37254	787 aa	Predicted RBP	4.61	□□□□□ -1.67
PBP4	YDL053C	TAT2	P38967	592 aa		4.61	□□□□□ -1.67
PBP4	YDL053C	SEC26	P41810	973 aa	Known RBP	4.61	□□□□□ -1.67
PBP4	YDL053C	YDL177C	Q12257	170 aa		4.61	□□□□□ -1.67
PBP4	YDL053C	YBR184W	P38299	523 aa		4.6	□□□□□ -1.67
PBP4	YDL053C	ETP1	P38748	585 aa	Known RBP	4.6	□□□□□ -1.67
PBP4	YDL053C	ECL1	P48235	211 aa		4.6	□□□□□ -1.67
PBP4	YDL053C	NAN1	Q02931	896 aa	Known RBP	4.6	□□□□□ -1.67
PBP4	YDL053C	HRQ1	Q05549	1077 aa		4.6	□□□□□ -1.67
PBP4	YDL053C	SVS1	Q12254	260 aa		4.6	□□□□□ -1.67
PBP4	YDL053C	THS1	P04801	734 aa	Known RBP	4.59	□□□□□ -1.67
PBP4	YDL053C	SEG2	P34250	1132 aa		4.59	□□□□□ -1.67
PBP4	YDL053C	PBY1	P38254	753 aa		4.59	□□□□□ -1.67
PBP4	YDL053C	IRR1	P40541	1150 aa		4.59	□□□□□ -1.67
PBP4	YDL053C	ENV11	P53246	860 aa		4.59	□□□□□ -1.67
PBP4	YDL053C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
PBP4	YDL053C	ATG13	Q06628	738 aa		4.59	□□□□□ -1.67
PBP4	YDL053C	ACE2	P21192	770 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms