RNA–Protein interactions for RNA: ENST00000641968.1

CASC19-271, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 842 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-271ENST00000641968 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
CASC19-271ENST00000641968 HRH3Q9Y5N1 445 aa8.58□□□□□ -1.04
CASC19-271ENST00000641968 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
CASC19-271ENST00000641968 BAZ1AQ9NRL2 1556 aaPredicted RBP8.57□□□□□ -1.04
CASC19-271ENST00000641968 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
CASC19-271ENST00000641968 LZTS3O60299 673 aaPredicted RBP8.57□□□□□ -1.04
CASC19-271ENST00000641968 GDF10P55107 478 aa8.57□□□□□ -1.04
CASC19-271ENST00000641968 GTF2IP78347 998 aa8.57□□□□□ -1.04
CASC19-271ENST00000641968 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
CASC19-271ENST00000641968 LAMC3Q9Y6N6 1575 aa8.56□□□□□ -1.04
CASC19-271ENST00000641968 SERTAD1Q9UHV2 236 aa8.56□□□□□ -1.04
CASC19-271ENST00000641968 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
CASC19-271ENST00000641968 TMEM229AB2RXF0 380 aa8.55□□□□□ -1.04
CASC19-271ENST00000641968 INHAP05111 366 aa8.55□□□□□ -1.04
CASC19-271ENST00000641968 PSME1Q06323 249 aa8.55□□□□□ -1.04
CASC19-271ENST00000641968 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
CASC19-271ENST00000641968 ZSCAN10Q96SZ4 725 aaPredicted RBP8.55□□□□□ -1.04
CASC19-271ENST00000641968 FHDC1Q9C0D6 1143 aaPredicted RBP8.55□□□□□ -1.04
CASC19-271ENST00000641968 PHKA2P46019 1235 aa8.54□□□□□ -1.04
CASC19-271ENST00000641968 TLR1Q15399 786 aa8.54□□□□□ -1.04
CASC19-271ENST00000641968 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
CASC19-271ENST00000641968 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
CASC19-271ENST00000641968 IRF7Q92985 503 aa8.54□□□□□ -1.04
CASC19-271ENST00000641968 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
CASC19-271ENST00000641968 MKRN1Q9UHC7 482 aaKnown RBP8.54□□□□□ -1.04
CASC19-271ENST00000641968 MAFBQ9Y5Q3 323 aaPredicted RBP8.54□□□□□ -1.04
CASC19-271ENST00000641968 SMARCA4P51532 1647 aa8.54□□□□□ -1.04
CASC19-271ENST00000641968 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
CASC19-271ENST00000641968 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
CASC19-271ENST00000641968 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
CASC19-271ENST00000641968 ITGA6P23229 1130 aa8.52□□□□□ -1.05
CASC19-271ENST00000641968 GMPRP36959 345 aa8.52□□□□□ -1.05
CASC19-271ENST00000641968 CLDN10P78369 228 aa8.52□□□□□ -1.05
CASC19-271ENST00000641968 TMEM214Q6NUQ4 689 aaKnown RBP8.52□□□□□ -1.05
CASC19-271ENST00000641968 TAS1R3Q7RTX0 852 aa8.52□□□□□ -1.05
CASC19-271ENST00000641968 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
CASC19-271ENST00000641968 ZBTB7BO15156 539 aaPredicted RBP8.51□□□□□ -1.05
CASC19-271ENST00000641968 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
CASC19-271ENST00000641968 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
CASC19-271ENST00000641968 GAS2L1Q99501 681 aaPredicted RBP8.51□□□□□ -1.05
CASC19-271ENST00000641968 CUEDC1Q9NWM3 386 aaPredicted RBP8.51□□□□□ -1.05
CASC19-271ENST00000641968 BAZ1BQ9UIG0 1483 aaKnown RBP8.51□□□□□ -1.05
CASC19-271ENST00000641968 CDC14CA4D256 554 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
CASC19-271ENST00000641968 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
CASC19-271ENST00000641968 SMTNP53814 917 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 C4orf17Q53FE4 359 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 GNASQ5JWF2 1037 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 VWA5B2Q8N398 1253 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
CASC19-271ENST00000641968 TPCN2Q8NHX9 752 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 TIMMDC1Q9NPL8 285 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
CASC19-271ENST00000641968 ZNF358Q9NW07 568 aa8.5□□□□□ -1.05
CASC19-271ENST00000641968 WDR62O43379 1518 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 PDS5BQ9NTI5 1447 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 VSIG8P0DPA2 414 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 RIPOR1Q6ZS17 1223 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 PPARGC1BQ86YN6 1023 aaKnown RBP8.49□□□□□ -1.05
CASC19-271ENST00000641968 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
CASC19-271ENST00000641968 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 DYRK1BQ9Y463 629 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 RIMBP3CA6NJZ7 1639 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 RIMBP3BA6NNM3 1639 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 RIMBP3Q9UFD9 1639 aa8.49□□□□□ -1.05
CASC19-271ENST00000641968 A6NJY4 79 aa8.48□□□□□ -1.05
CASC19-271ENST00000641968 RASA1P20936 1047 aa8.48□□□□□ -1.05
CASC19-271ENST00000641968 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
CASC19-271ENST00000641968 RHBDD1Q8TEB9 315 aa8.48□□□□□ -1.05
CASC19-271ENST00000641968 USP3Q9Y6I4 520 aa8.48□□□□□ -1.05
CASC19-271ENST00000641968 MRC2Q9UBG0 1479 aa8.48□□□□□ -1.05
CASC19-271ENST00000641968 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
CASC19-271ENST00000641968 RFX1P22670 979 aa8.47□□□□□ -1.05
CASC19-271ENST00000641968 WDR44Q5JSH3 913 aa8.47□□□□□ -1.05
CASC19-271ENST00000641968 CFAP70Q5T0N1 1121 aa8.47□□□□□ -1.05
CASC19-271ENST00000641968 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
CASC19-271ENST00000641968 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
CASC19-271ENST00000641968 BACH1O14867 736 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 WIPF1O43516 503 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 PLA2G4AP47712 749 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 MTFR1Q15390 333 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 SV2AQ7L0J3 742 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 LARGE2Q8N3Y3 721 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 GPAMQ9HCL2 828 aa8.46□□□□□ -1.06
CASC19-271ENST00000641968 SFI1A8K8P3 1242 aa8.45□□□□□ -1.06
CASC19-271ENST00000641968 DBN1Q16643 649 aa8.45□□□□□ -1.06
CASC19-271ENST00000641968 CRTC2Q53ET0 693 aaPredicted RBP8.45□□□□□ -1.06
CASC19-271ENST00000641968 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
CASC19-271ENST00000641968 TBCELQ5QJ74 424 aa8.45□□□□□ -1.06
CASC19-271ENST00000641968 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
CASC19-271ENST00000641968 IQSEC3Q9UPP2 1182 aaPredicted RBP8.45□□□□□ -1.06
CASC19-271ENST00000641968 CDK2AP1O14519 115 aa8.44□□□□□ -1.06
CASC19-271ENST00000641968 DKK1O94907 266 aa8.44□□□□□ -1.06
CASC19-271ENST00000641968 F11P03951 625 aa8.44□□□□□ -1.06
CASC19-271ENST00000641968 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
CASC19-271ENST00000641968 ZNF837Q96EG3 531 aaPredicted RBP8.44□□□□□ -1.06
CASC19-271ENST00000641968 NIFKQ9BYG3 293 aaKnown RBP8.44□□□□□ -1.06
CASC19-271ENST00000641968 VRTNQ9H8Y1 702 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms