RNA–Protein interactions for RNA: ENST00000627253.1

SNORD3E-202, Transcript of small nucleolar RNA, C/D box 3E, humanhuman

BASIC

Gene SNORD3E, Length 216 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3E-202ENST00000627253 RNF20Q5VTR2 975 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 LYSMD3Q7Z3D4 306 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 DZIP3Q86Y13 1208 aaKnown RBP2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 PLEKHM2Q8IWE5 1019 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 TRIM22Q8IYM9 498 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 TRIM52Q96A61 297 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 SPOCK3Q9BQ16 436 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 PCDHB9Q9Y5E1 797 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 HRH3Q9Y5N1 445 aa2.97□□□□□ -1.93
SNORD3E-202ENST00000627253 A0A1W2PRU2 124 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 SHISA8B8ZZ34 492 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 ATP9BO43861 1147 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 ADAM23O75077 832 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 COL8A1P27658 744 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 SNRPNP63162 240 aaKnown RBP2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 SLFNL1Q499Z3 407 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 HOMEZQ8IX15 550 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 PBXIP1Q96AQ6 731 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 GRIP2Q9C0E4 1043 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 OSBPL3Q9H4L5 887 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 MBIPQ9NS73 344 aa2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 TFIP11Q9UBB9 837 aaKnown RBP2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 MAFBQ9Y5Q3 323 aaPredicted RBP2.96□□□□□ -1.94
SNORD3E-202ENST00000627253 KRBA1A5PL33 1030 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 USP17L5A8MUK1 530 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 RNF225M0QZC1 329 aaPredicted RBP2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 C2CD2LO14523 706 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 STAU1O95793 577 aaKnown RBP2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 POU4F2Q12837 409 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 KANK3Q6NY19 840 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 TBC1D9Q6ZT07 1266 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 RNF135Q8IUD6 432 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 GTPBP3Q969Y2 492 aaKnown RBP2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 ARID3AQ99856 593 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 DYRK1BQ9Y463 629 aa2.95□□□□□ -1.94
SNORD3E-202ENST00000627253 USP17L3A6NCW0 530 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 USP17L4A6NCW7 530 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 SPATA31C2B4DYI2 1134 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 ATP5J2-PTCD1G3V325 749 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 PIK3CDO00329 1044 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 ATG7O95352 703 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 IL2RAP01589 272 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 IGHA1P01876 353 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 BCRP11274 1271 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 SKIP12755 728 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 LMOD1P29536 600 aaPredicted RBP2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 GPC1P35052 558 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 PDE4CQ08493 712 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 ELOAQ14241 798 aaKnown RBP2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 TSGA10IPQ3SY00 556 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 KANK4Q5T7N3 995 aaPredicted RBP2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 NBPF10Q6P3W6 841 aaKnown RBP2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 USP17L2Q6R6M4 530 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 USP17L1Q7RTZ2 530 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 NBPF15Q8N660 670 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 PLPP7Q8NBV4 271 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 SIRT1Q96EB6 747 aa2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 CDCA7Q9BWT1 371 aaPredicted RBP2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 FHDC1Q9C0D6 1143 aaPredicted RBP2.94□□□□□ -1.94
SNORD3E-202ENST00000627253 MEN1O00255 615 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 OIP5O43482 229 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 MARSP56192 900 aaKnown RBP2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 CLN3Q13286 438 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 EML3Q32P44 896 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 CC2D2BQ6DHV5 1058 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 LINC00114Q6XXX2 140 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 TRIM50Q86XT4 487 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 ZNF295-AS1Q8N0V1 137 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 SCARF2Q96GP6 870 aaPredicted RBP2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 CCDC85AQ96PX6 553 aaPredicted RBP2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 SUV39H2Q9H5I1 410 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 VRTNQ9H8Y1 702 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 ARHGEF10LQ9HCE6 1279 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 RAB6BQ9NRW1 208 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 NDFIP2Q9NV92 336 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 DNAAF2Q9NVR5 837 aaKnown RBP2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 DOLKQ9UPQ8 538 aa2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 ACIN1Q9UKV3 1341 aaKnown RBP2.93□□□□□ -1.94
SNORD3E-202ENST00000627253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 FAM196BA6NMK8 535 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 ATP1A2P50993 1020 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 FOXK2Q01167 660 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 USP4Q13107 963 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 NCOA4Q13772 614 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 RIPOR1Q6ZS17 1223 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 LARGE2Q8N3Y3 721 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 MKRN1Q9UHC7 482 aaKnown RBP2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 NOD1Q9Y239 953 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 USTQ9Y2C2 406 aa2.92□□□□□ -1.94
SNORD3E-202ENST00000627253 WASLO00401 505 aaPredicted RBP2.91□□□□□ -1.94
SNORD3E-202ENST00000627253 MSTNO14793 375 aa2.91□□□□□ -1.94
SNORD3E-202ENST00000627253 MYCP01106 439 aaPredicted RBP2.91□□□□□ -1.94
SNORD3E-202ENST00000627253 RFX1P22670 979 aa2.91□□□□□ -1.94
SNORD3E-202ENST00000627253 PTK7Q13308 1070 aa2.91□□□□□ -1.94
SNORD3E-202ENST00000627253 LARP1Q6PKG0 1096 aaKnown RBP2.91□□□□□ -1.94
SNORD3E-202ENST00000627253 SIX5Q8N196 739 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms