RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 K7ELQ4 463 aaPredicted RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 HSP90AB1P08238 724 aaKnown RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 NASPP49321 788 aaPredicted RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 BRPF1P55201 1214 aaPredicted RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 NUCB1Q02818 461 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 CSPP1Q1MSJ5 1256 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 BMP2KLQ5H9B9 411 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 SMAP1Q8IYB5 467 aaPredicted RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 CHMP4BQ9H444 224 aaKnown RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 PRDM4Q9UKN5 801 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 TRAK1Q9UPV9 953 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 NWD1Q149M9 1564 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 DYNC1I1O14576 645 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 RIPK4P57078 832 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 NUCB2P80303 420 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 FTSJ3Q8IY81 847 aaKnown RBP5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 CFAP53Q96M91 514 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 ARXQ96QS3 562 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 KIF2CQ99661 725 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 ZBTB40Q9NUA8 1239 aa5.17□□□□□ -1.58
PTP4A1-205ENST00000626021 BAG4O95429 457 aaKnown RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 CPSF1Q10570 1443 aaKnown RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 ALDH1L2Q3SY69 923 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 TMEM132EQ6IEE7 984 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 ATF7IPQ6VMQ6 1270 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 ZNF428Q96B54 188 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 GCC1Q96CN9 775 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 SIRT1Q96EB6 747 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 N4BP2Q86UW6 1770 aaPredicted RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 PHRF1Q9P1Y6 1649 aaKnown RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 CDK12Q9NYV4 1490 aaPredicted RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 PIK3C2AO00443 1686 aa5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 IPO8O15397 1037 aaKnown RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 CYP2E1P05181 493 aaPredicted RBP5.16□□□□□ -1.58
PTP4A1-205ENST00000626021 PEAK1Q9H792 1746 aa5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 LTN1O94822 1766 aa5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 EDC4Q6P2E9 1401 aaKnown RBP5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 G3V3G9 751 aa5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 TRIM27P14373 513 aa5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 MKRN3Q13064 507 aaKnown RBP5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 CHD1LQ86WJ1 897 aa5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 CWC22Q9HCG8 908 aaKnown RBP5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 DDX49Q9Y6V7 483 aaKnown RBP5.15□□□□□ -1.58
PTP4A1-205ENST00000626021 UTP14CQ5TAP6 766 aaKnown RBP5.15□□□□□ -1.59
PTP4A1-205ENST00000626021 RNF25Q96BH1 459 aaPredicted RBP5.15□□□□□ -1.59
PTP4A1-205ENST00000626021 LMBRD1Q9NUN5 540 aa5.15□□□□□ -1.59
PTP4A1-205ENST00000626021 ZKSCAN5Q9Y2L8 839 aa5.15□□□□□ -1.59
PTP4A1-205ENST00000626021 CACNA1FO60840 1977 aa5.15□□□□□ -1.59
PTP4A1-205ENST00000626021 METP08581 1390 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 PIK3R4Q99570 1358 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 SSFA2P28290 1259 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 PSEN1P49768 467 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 MTHFSP49914 203 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 EXOSC9Q06265 439 aaKnown RBP5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 RABEP1Q15276 862 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 NEUROD2Q15784 382 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 SASS6Q6UVJ0 657 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 ARHGAP45Q92619 1136 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 SMC4Q9NTJ3 1288 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 PPIP5K1Q6PFW1 1433 aa5.14□□□□□ -1.59
PTP4A1-205ENST00000626021 LRRC37A3O60309 1634 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 TMEM57Q8N5G2 664 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 SSH1Q8WYL5 1049 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 PRAM1Q96QH2 718 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 PLEKHF1Q96S99 279 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 BCL2L13Q9BXK5 485 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 SLC12A5Q9H2X9 1139 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 CCDC39Q9UFE4 941 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 RRP7AQ9Y3A4 280 aaKnown RBP5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 R3HCC1Q9Y3T6 440 aaKnown RBP5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 KIF24Q5T7B8 1368 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 PNPLA6Q8IY17 1366 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 PTPRUQ92729 1446 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 KIF1AQ12756 1690 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 UQCRHLA0A096LP55 91 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 UQCRHP07919 91 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 TMPOP42166 694 aaKnown RBP5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 ZSCAN23Q3MJ62 389 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 NUTM2DQ5VT03 806 aaPredicted RBP5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 LRSAM1Q6UWE0 723 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 ITPRIPQ8IWB1 547 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 GAS2L2Q8NHY3 880 aa5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 NOB1Q9ULX3 412 aaKnown RBP5.13□□□□□ -1.59
PTP4A1-205ENST00000626021 TRPM3Q9HCF6 1732 aaPredicted RBP5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 ZBTB7BO15156 539 aaPredicted RBP5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 CDC45O75419 566 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 TBC1D9Q6ZT07 1266 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 RBSNQ9H1K0 784 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 RYDENQ9NUL5 291 aaKnown RBP5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 ROBO2Q9HCK4 1378 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 OVOS2A0A0J9YW53 1432 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 OVOS2Q6IE36 1432 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 ANKARQ7Z5J8 1434 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 CAMTA1Q9Y6Y1 1673 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 CRYBG1Q9Y4K1 1723 aa5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 CD2BP2O95400 341 aaKnown RBP5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 HDGFP51858 240 aaKnown RBP5.12□□□□□ -1.59
PTP4A1-205ENST00000626021 UVSSAQ2YD98 709 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms