RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 HLTFQ14527 1009 aaKnown RBP eCLIP19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 WDR63Q8IWG1 891 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CLNS1AP54105 237 aaKnown RBP19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 DAAM2Q86T65 1068 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 BMP2KQ9NSY1 1161 aaPredicted RBP19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 HSF2BPO75031 334 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 HMOX1P09601 288 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CCDC57Q2TAC2 916 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 FERMT3Q86UX7 667 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 NEBLO76041 1014 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 YEATS4O95619 227 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CCT4P50991 539 aaKnown RBP19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 MSL1Q68DK7 614 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 MAATS1Q7Z4T9 603 aa19.06■□□□□ 0.64
CNTNAP3B-214ENST00000618777 GNG11P61952 73 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 UBE4AQ14139 1066 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ZSCAN23Q3MJ62 389 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 TMC6Q7Z403 805 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 U2AF2P26368 475 aaKnown RBP eCLIP19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 SEPT6Q14141 434 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CCDC6Q16204 474 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 GSTTP1A0A1W2PQM5 241 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 GOPCQ9HD26 462 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 SH2B1Q9NRF2 756 aaPredicted RBP19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CEP131Q9UPN4 1083 aa19.05■□□□□ 0.64
CNTNAP3B-214ENST00000618777 MYRIPQ8NFW9 859 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 SLC3A2P08195 630 aaKnown RBP19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 FKBP15Q5T1M5 1219 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ZNF830Q96NB3 372 aaPredicted RBP19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 TAOK3Q9H2K8 898 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CEP83Q9Y592 693 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 STX1AQ16623 288 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CCDC12Q8WUD4 166 aaPredicted RBP19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ZNF165P49910 485 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CCDC178Q5BJE1 867 aa19.04■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CKAP2LQ8IYA6 745 aa19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ALS2CR12Q96Q35 445 aa19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 WASF1Q92558 559 aa19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ZBTB12Q9Y330 459 aaPredicted RBP19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 MTHFSP49914 203 aa19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 NBPF11Q86T75 865 aa19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 FYB1O15117 783 aa19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 NSRP1Q9H0G5 558 aaKnown RBP19.03■□□□□ 0.64
CNTNAP3B-214ENST00000618777 KIF5BP33176 963 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 MCM6Q14566 821 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 RNF168Q8IYW5 571 aaPredicted RBP19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 NUTM2FA1L443 756 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 CCDC69A6NI79 296 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ABCC8Q09428 1581 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 VPS36Q86VN1 386 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 ZHX3Q9H4I2 956 aa19.02■□□□□ 0.64
CNTNAP3B-214ENST00000618777 OPA1O60313 960 aa19.02■□□□□ 0.63
CNTNAP3B-214ENST00000618777 ATP2C2O75185 946 aa19.02■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.63
CNTNAP3B-214ENST00000618777 RPAP2Q8IXW5 612 aaPredicted RBP19.02■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CCDC121Q6ZUS5 278 aa19.02■□□□□ 0.63
CNTNAP3B-214ENST00000618777 MINK1Q8N4C8 1332 aaPredicted RBP19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 TUBB4BP68371 445 aa19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 EHBP1Q8NDI1 1231 aa19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CKAP4Q07065 602 aaKnown RBP19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CFAP57Q96MR6 1250 aa19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 SCLT1Q96NL6 688 aa19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 NUP88Q99567 741 aaPredicted RBP19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 ATRIPQ8WXE1 791 aa19.01■□□□□ 0.63
CNTNAP3B-214ENST00000618777 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 MTMR7Q9Y216 660 aa19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CTNNA3Q9UI47 895 aa19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 EID1Q9Y6B2 187 aa19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 HYPKQ9NX55 129 aa19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 UBE2HP62256 183 aa19■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CTAGE15A4D2H0 777 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CTAGE8P0CG41 777 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CACNA2D4Q7Z3S7 1137 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CTAGE6Q86UF2 777 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CTAGE4Q8IX94 777 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 GTF3C6Q969F1 213 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 VPS18Q9P253 973 aa18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 TTC12Q9H892 705 aaPredicted RBP18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.99■□□□□ 0.63
CNTNAP3B-214ENST00000618777 ANKS4BQ8N8V4 417 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 TSR2Q969E8 191 aaKnown RBP18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 EFCC1Q9HA90 598 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 HCLS1P14317 486 aaPredicted RBP18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CWC27Q6UX04 472 aaKnown RBP18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 FAM114A1Q8IWE2 563 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 SKILP12757 684 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 PAF1Q8N7H5 531 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 FAM177BA6PVY3 158 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 NACAP1Q9BZK3 213 aa18.98■□□□□ 0.63
CNTNAP3B-214ENST00000618777 ANKRD18BA2A2Z9 1011 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 CCDC158Q5M9N0 1113 aa18.97■□□□□ 0.63
CNTNAP3B-214ENST00000618777 KLHL10Q6JEL2 608 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms