RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 STX6O43752 255 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 GTF2E1P29083 439 aaPredicted RBP7.98□□□□□ -1.13
LMO3-235ENST00000616247 UBE2HP62256 183 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 NRBP1Q9UHY1 535 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 ATP10AO60312 1499 aa7.98□□□□□ -1.13
LMO3-235ENST00000616247 TULP1O00294 542 aaPredicted RBP7.97□□□□□ -1.13
LMO3-235ENST00000616247 ZSCAN22P10073 491 aaPredicted RBP7.97□□□□□ -1.13
LMO3-235ENST00000616247 SYT1P21579 422 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 FOSBP53539 338 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 FILIP1Q7Z7B0 1213 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 ZRANB1Q9UGI0 708 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 SPG7Q9UQ90 795 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 A0A1W2PP64 1363 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 NUTM2FA1L443 756 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 LMOD3Q0VAK6 560 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 BICD2Q8TD16 824 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 ZBTB9Q96C00 473 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 LRRCC1Q9C099 1032 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 OGFRQ9NZT2 677 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 ABCC4O15439 1325 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 DUOX2Q9NRD8 1548 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 MYO5CQ9NQX4 1742 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 VGFO15240 615 aaPredicted RBP7.97□□□□□ -1.13
LMO3-235ENST00000616247 CEBPZQ03701 1054 aaKnown RBP7.97□□□□□ -1.13
LMO3-235ENST00000616247 GORABQ5T7V8 394 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 CWC27Q6UX04 472 aaKnown RBP7.97□□□□□ -1.13
LMO3-235ENST00000616247 NECAB1Q8N987 351 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
LMO3-235ENST00000616247 ARHGEF5Q12774 1597 aa7.96□□□□□ -1.13
LMO3-235ENST00000616247 AP5Z1O43299 807 aa7.96□□□□□ -1.13
LMO3-235ENST00000616247 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.13
LMO3-235ENST00000616247 TNMDQ9H2S6 317 aa7.96□□□□□ -1.13
LMO3-235ENST00000616247 POLKQ9UBT6 870 aa7.96□□□□□ -1.13
LMO3-235ENST00000616247 LAMC1P11047 1609 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 ZCCHC11Q5TAX3 1644 aaKnown RBP7.96□□□□□ -1.14
LMO3-235ENST00000616247 MADDQ8WXG6 1647 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 GOLGA6L19H0YKK7 550 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 CASTP20810 708 aaKnown RBP7.96□□□□□ -1.14
LMO3-235ENST00000616247 CHMLP26374 656 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 NCBP1Q09161 790 aaKnown RBP7.96□□□□□ -1.14
LMO3-235ENST00000616247 SULT6B1Q6IMI4 303 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 UNC5CLQ8IV45 518 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 CDK19Q9BWU1 502 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 NUP62CLQ9H1M0 184 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.96□□□□□ -1.14
LMO3-235ENST00000616247 MAST1Q9Y2H9 1570 aa7.96□□□□□ -1.14
LMO3-235ENST00000616247 ABCB7O75027 752 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 TPM3P06753 285 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 TNNT3P45378 269 aaPredicted RBP7.95□□□□□ -1.14
LMO3-235ENST00000616247 MAP3K11Q16584 847 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 TCEANC2Q96MN5 208 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 RIMBP3CA6NJZ7 1639 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 RIMBP3BA6NNM3 1639 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 RIMBP3Q9UFD9 1639 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 CCDC66A2RUB6 948 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 SURF6O75683 361 aaKnown RBP7.95□□□□□ -1.14
LMO3-235ENST00000616247 F13A1P00488 732 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 GNAI2P04899 355 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 GJB2P29033 226 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 AK2P54819 239 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 STK3Q13188 491 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 ANO6Q4KMQ2 910 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 G2E3Q7L622 706 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 KLHL34Q8N239 644 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 INTS4Q96HW7 963 aaKnown RBP7.95□□□□□ -1.14
LMO3-235ENST00000616247 FEZ1Q99689 392 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 STK31Q9BXU1 1019 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 MSH6P52701 1360 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 GTF2F1P35269 517 aaKnown RBP eCLIP7.95□□□□□ -1.14
LMO3-235ENST00000616247 CUL4AQ13619 759 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 LARP1BQ659C4 914 aaKnown RBP7.95□□□□□ -1.14
LMO3-235ENST00000616247 POTEHQ6S545 545 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 NME9Q86XW9 330 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 SPTLC3Q9NUV7 552 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 CLIP2Q9UDT6 1046 aa7.95□□□□□ -1.14
LMO3-235ENST00000616247 TTC37Q6PGP7 1564 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 BECN2A8MW95 431 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 JAKMIP1Q96N16 626 aaKnown RBP7.94□□□□□ -1.14
LMO3-235ENST00000616247 POLR3GO15318 223 aaPredicted RBP7.94□□□□□ -1.14
LMO3-235ENST00000616247 HAP1P54257 671 aaPredicted RBP7.94□□□□□ -1.14
LMO3-235ENST00000616247 TYRO3Q06418 890 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 ST7Q9NRC1 585 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 DACT1Q9NYF0 836 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 TSPYL4Q9UJ04 414 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 LIMCH1Q9UPQ0 1083 aa7.94□□□□□ -1.14
LMO3-235ENST00000616247 KRT222Q8N1A0 295 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 FAM200AQ8TCP9 573 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 GTF3C6Q969F1 213 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 DNAJC25Q9H1X3 360 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 LIG1P18858 919 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 ZNF165P49910 485 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 PTPN14Q15678 1187 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 TAF3Q5VWG9 929 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 ZFP91Q96JP5 570 aaPredicted RBP7.93□□□□□ -1.14
LMO3-235ENST00000616247 TMEM51Q9NW97 253 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 NSD2O96028 1365 aa7.93□□□□□ -1.14
LMO3-235ENST00000616247 PNMA6EA0A0J9YXQ4 647 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms