RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TIMMDC1Q9NPL8 285 aa8.83□□□□□ -1
SMCHD1-213ENST00000609587 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
SMCHD1-213ENST00000609587 TAS1R3Q7RTX0 852 aa8.82□□□□□ -1
SMCHD1-213ENST00000609587 RRAGCQ9HB90 399 aa8.82□□□□□ -1
SMCHD1-213ENST00000609587 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
SMCHD1-213ENST00000609587 LINC00114Q6XXX2 140 aa8.81□□□□□ -1
SMCHD1-213ENST00000609587 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
SMCHD1-213ENST00000609587 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
SMCHD1-213ENST00000609587 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
SMCHD1-213ENST00000609587 GPAMQ9HCL2 828 aa8.81□□□□□ -1
SMCHD1-213ENST00000609587 TIMELESSQ9UNS1 1208 aa8.81□□□□□ -1
SMCHD1-213ENST00000609587 CYP2U1Q7Z449 544 aa8.8□□□□□ -1
SMCHD1-213ENST00000609587 BANK1Q8NDB2 785 aa8.8□□□□□ -1
SMCHD1-213ENST00000609587 EDARADDQ8WWZ3 215 aa8.8□□□□□ -1
SMCHD1-213ENST00000609587 TRIM52Q96A61 297 aa8.8□□□□□ -1
SMCHD1-213ENST00000609587 GDF2Q9UK05 429 aaPredicted RBP8.8□□□□□ -1
SMCHD1-213ENST00000609587 PCDHB9Q9Y5E1 797 aa8.8□□□□□ -1
SMCHD1-213ENST00000609587 C14orf37Q86TY3 774 aa8.79□□□□□ -1
SMCHD1-213ENST00000609587 CD163Q86VB7 1156 aa8.79□□□□□ -1
SMCHD1-213ENST00000609587 C1QTNF9BB2RNN3 333 aa8.78□□□□□ -1
SMCHD1-213ENST00000609587 CHRNA4P43681 627 aa8.78□□□□□ -1
SMCHD1-213ENST00000609587 SLCO4C1Q6ZQN7 724 aa8.78□□□□□ -1
SMCHD1-213ENST00000609587 GOLGA6L1Q8N7Z2 621 aa8.78□□□□□ -1
SMCHD1-213ENST00000609587 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
SMCHD1-213ENST00000609587 TRAK2O60296 914 aa8.77□□□□□ -1.01
SMCHD1-213ENST00000609587 FBXO45P0C2W1 286 aa8.77□□□□□ -1.01
SMCHD1-213ENST00000609587 RAB6BQ9NRW1 208 aa8.77□□□□□ -1.01
SMCHD1-213ENST00000609587 ZBBXA8MT70 800 aa8.76□□□□□ -1.01
SMCHD1-213ENST00000609587 SOCS7O14512 581 aa8.76□□□□□ -1.01
SMCHD1-213ENST00000609587 C2CD2LO14523 706 aa8.76□□□□□ -1.01
SMCHD1-213ENST00000609587 GNB5O14775 395 aa8.75□□□□□ -1.01
SMCHD1-213ENST00000609587 KRTAP1-3Q8IUG1 177 aa8.75□□□□□ -1.01
SMCHD1-213ENST00000609587 PHF24Q9UPV7 400 aa8.75□□□□□ -1.01
SMCHD1-213ENST00000609587 A0A1B0GTH6 734 aa8.74□□□□□ -1.01
SMCHD1-213ENST00000609587 AMPD1P23109 780 aa8.74□□□□□ -1.01
SMCHD1-213ENST00000609587 PHKA2P46019 1235 aa8.74□□□□□ -1.01
SMCHD1-213ENST00000609587 DGKGP49619 791 aa8.74□□□□□ -1.01
SMCHD1-213ENST00000609587 CCDC125Q86Z20 511 aa8.74□□□□□ -1.01
SMCHD1-213ENST00000609587 GGA1Q9UJY5 639 aa8.74□□□□□ -1.01
SMCHD1-213ENST00000609587 IL2RAP01589 272 aa8.73□□□□□ -1.01
SMCHD1-213ENST00000609587 BMP4P12644 408 aa8.73□□□□□ -1.01
SMCHD1-213ENST00000609587 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
SMCHD1-213ENST00000609587 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
SMCHD1-213ENST00000609587 ATXN7L1Q9ULK2 861 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-213ENST00000609587 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
SMCHD1-213ENST00000609587 GJD4Q96KN9 370 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-213ENST00000609587 NDFIP2Q9NV92 336 aa8.72□□□□□ -1.01
SMCHD1-213ENST00000609587 EPXP11678 715 aa8.71□□□□□ -1.02
SMCHD1-213ENST00000609587 LBRQ14739 615 aaKnown RBP8.71□□□□□ -1.02
SMCHD1-213ENST00000609587 MTMR14Q8NCE2 650 aa8.71□□□□□ -1.02
SMCHD1-213ENST00000609587 CNKSR1Q969H4 720 aa8.71□□□□□ -1.02
SMCHD1-213ENST00000609587 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.02
SMCHD1-213ENST00000609587 HRH3Q9Y5N1 445 aa8.71□□□□□ -1.02
SMCHD1-213ENST00000609587 FGFR3P22607 806 aa8.7□□□□□ -1.02
SMCHD1-213ENST00000609587 RNF20Q5VTR2 975 aa8.7□□□□□ -1.02
SMCHD1-213ENST00000609587 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-213ENST00000609587 SEMA6BQ9H3T3 888 aa8.7□□□□□ -1.02
SMCHD1-213ENST00000609587 SNRKQ9NRH2 765 aa8.7□□□□□ -1.02
SMCHD1-213ENST00000609587 APBB1O00213 710 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 PIK3R2O00459 728 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 CTBSQ01459 385 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 CENPCQ03188 943 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 DOC2BQ14184 412 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 BTBD6Q96KE9 485 aa8.69□□□□□ -1.02
SMCHD1-213ENST00000609587 BNIP3LO60238 219 aa8.68□□□□□ -1.02
SMCHD1-213ENST00000609587 GNRH1P01148 92 aa8.68□□□□□ -1.02
SMCHD1-213ENST00000609587 MSX1P28360 303 aa8.68□□□□□ -1.02
SMCHD1-213ENST00000609587 FLIIQ13045 1269 aa8.68□□□□□ -1.02
SMCHD1-213ENST00000609587 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
SMCHD1-213ENST00000609587 ZSCAN10Q96SZ4 725 aaPredicted RBP8.68□□□□□ -1.02
SMCHD1-213ENST00000609587 CSB-PGBD3P0DP91 1061 aa8.67□□□□□ -1.02
SMCHD1-213ENST00000609587 FOXD4L6Q3SYB3 417 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-213ENST00000609587 FOXD4L3Q6VB84 417 aaPredicted RBP8.67□□□□□ -1.02
SMCHD1-213ENST00000609587 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
SMCHD1-213ENST00000609587 NOP53Q9NZM5 478 aaKnown RBP8.67□□□□□ -1.02
SMCHD1-213ENST00000609587 ARAFP10398 606 aa8.66□□□□□ -1.02
SMCHD1-213ENST00000609587 KRTAP4-12Q9BQ66 201 aa8.66□□□□□ -1.02
SMCHD1-213ENST00000609587 NEURL1BA8MQ27 555 aa8.65□□□□□ -1.02
SMCHD1-213ENST00000609587 EFHC2Q5JST6 749 aa8.65□□□□□ -1.02
SMCHD1-213ENST00000609587 GNASQ5JWF2 1037 aa8.65□□□□□ -1.02
SMCHD1-213ENST00000609587 CHSY3Q70JA7 882 aa8.65□□□□□ -1.02
SMCHD1-213ENST00000609587 DNAAF2Q9NVR5 837 aaKnown RBP8.65□□□□□ -1.02
SMCHD1-213ENST00000609587 NDUFB9Q9Y6M9 179 aa8.65□□□□□ -1.02
SMCHD1-213ENST00000609587 GPR37L1O60883 481 aa8.64□□□□□ -1.03
SMCHD1-213ENST00000609587 NR1H3Q13133 447 aa8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 MCM6Q14566 821 aa8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 LCE3BQ5TA77 95 aa8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 XAGE2Q96GT9 111 aa8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 CRISPLD1Q9H336 500 aa8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 HCN2Q9UL51 889 aa8.63□□□□□ -1.03
SMCHD1-213ENST00000609587 TRIM11Q96F44 468 aa8.62□□□□□ -1.03
SMCHD1-213ENST00000609587 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
SMCHD1-213ENST00000609587 PRM3Q9NNZ6 103 aa8.62□□□□□ -1.03
SMCHD1-213ENST00000609587 RSPO4Q2I0M5 234 aaPredicted RBP8.61□□□□□ -1.03
SMCHD1-213ENST00000609587 CDCA7Q9BWT1 371 aaPredicted RBP8.61□□□□□ -1.03
SMCHD1-213ENST00000609587 KLF15Q9UIH9 416 aa8.61□□□□□ -1.03
SMCHD1-213ENST00000609587 ATP4AP20648 1035 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms