RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 C9orf131Q5VYM1 1079 aa12.91□□□□□ -0.34
SRRM1-221ENST00000593639 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
SRRM1-221ENST00000593639 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
SRRM1-221ENST00000593639 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
SRRM1-221ENST00000593639 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 CAPN15O75808 1086 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 KCNA3P22001 575 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 TMF1P82094 1093 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
SRRM1-221ENST00000593639 PHKG2P15735 406 aa12.89□□□□□ -0.35
SRRM1-221ENST00000593639 FSTL1Q12841 308 aa12.89□□□□□ -0.35
SRRM1-221ENST00000593639 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
SRRM1-221ENST00000593639 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
SRRM1-221ENST00000593639 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
SRRM1-221ENST00000593639 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
SRRM1-221ENST00000593639 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
SRRM1-221ENST00000593639 GYS1P13807 737 aa12.88□□□□□ -0.35
SRRM1-221ENST00000593639 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
SRRM1-221ENST00000593639 EYA1Q99502 592 aa12.88□□□□□ -0.35
SRRM1-221ENST00000593639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.354e-7■■□□□ 13.2
SRRM1-221ENST00000593639 KDRP35968 1356 aa12.88□□□□□ -0.35
SRRM1-221ENST00000593639 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
SRRM1-221ENST00000593639 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
SRRM1-221ENST00000593639 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
SRRM1-221ENST00000593639 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
SRRM1-221ENST00000593639 KIAA1551Q9HCM1 1747 aa12.87□□□□□ -0.35
SRRM1-221ENST00000593639 PLEKHG2Q9H7P9 1386 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 ADRA2BP18089 450 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 PARP3Q9Y6F1 533 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
SRRM1-221ENST00000593639 RFC4P35249 363 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 PRELPP51888 382 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
SRRM1-221ENST00000593639 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 ITGB4P16144 1822 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 WASHC2AQ641Q2 1341 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
SRRM1-221ENST00000593639 RPS6KA4O75676 772 aa12.84□□□□□ -0.35
SRRM1-221ENST00000593639 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
SRRM1-221ENST00000593639 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
SRRM1-221ENST00000593639 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
SRRM1-221ENST00000593639 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.35
SRRM1-221ENST00000593639 WDR90Q96KV7 1748 aa12.83□□□□□ -0.36
SRRM1-221ENST00000593639 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
SRRM1-221ENST00000593639 CHRNA5P30532 468 aa12.82□□□□□ -0.36
SRRM1-221ENST00000593639 DDR1Q08345 913 aa12.82□□□□□ -0.36
SRRM1-221ENST00000593639 FKBP8Q14318 412 aa12.82□□□□□ -0.36
SRRM1-221ENST00000593639 SRP68Q9UHB9 627 aaKnown RBP12.82□□□□□ -0.36
SRRM1-221ENST00000593639 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
SRRM1-221ENST00000593639 SMC1BQ8NDV3 1235 aa12.81□□□□□ -0.36
SRRM1-221ENST00000593639 POLKQ9UBT6 870 aa12.81□□□□□ -0.36
SRRM1-221ENST00000593639 C4AP0C0L4 1744 aa12.81□□□□□ -0.36
SRRM1-221ENST00000593639 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
SRRM1-221ENST00000593639 HSPA1AP0DMV8 641 aaKnown RBP12.79□□□□□ -0.36
SRRM1-221ENST00000593639 HSPA1BP0DMV9 641 aaKnown RBP12.79□□□□□ -0.36
SRRM1-221ENST00000593639 RASSF7Q02833 373 aa12.79□□□□□ -0.36
SRRM1-221ENST00000593639 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
SRRM1-221ENST00000593639 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
SRRM1-221ENST00000593639 PTCD1O75127 700 aaKnown RBP12.78□□□□□ -0.36
SRRM1-221ENST00000593639 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
SRRM1-221ENST00000593639 CDCA8Q53HL2 280 aa12.78□□□□□ -0.36
SRRM1-221ENST00000593639 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.37
SRRM1-221ENST00000593639 HSP90AB1P08238 724 aaKnown RBP12.77□□□□□ -0.37
SRRM1-221ENST00000593639 CABP4P57796 275 aa12.77□□□□□ -0.37
SRRM1-221ENST00000593639 TM4SF1P30408 202 aa12.76□□□□□ -0.37
SRRM1-221ENST00000593639 INTS5Q6P9B9 1019 aaKnown RBP12.76□□□□□ -0.37
SRRM1-221ENST00000593639 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
SRRM1-221ENST00000593639 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
SRRM1-221ENST00000593639 GLTPD2A6NH11 291 aa12.75□□□□□ -0.37
SRRM1-221ENST00000593639 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-221ENST00000593639 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-221ENST00000593639 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-221ENST00000593639 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-221ENST00000593639 KIF20BQ96Q89 1820 aa12.75□□□□□ -0.37
SRRM1-221ENST00000593639 LMNB1P20700 586 aa12.74□□□□□ -0.37
SRRM1-221ENST00000593639 MTHFSP49914 203 aa12.74□□□□□ -0.37
SRRM1-221ENST00000593639 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
SRRM1-221ENST00000593639 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
SRRM1-221ENST00000593639 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
SRRM1-221ENST00000593639 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
SRRM1-221ENST00000593639 COL5A3P25940 1745 aaPredicted RBP12.73□□□□□ -0.37
SRRM1-221ENST00000593639 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
SRRM1-221ENST00000593639 POTECB2RU33 542 aa12.72□□□□□ -0.37
SRRM1-221ENST00000593639 NFIXQ14938 502 aa12.72□□□□□ -0.37
SRRM1-221ENST00000593639 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
SRRM1-221ENST00000593639 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
SRRM1-221ENST00000593639 TNRC6CQ9HCJ0 1690 aaKnown RBP12.71□□□□□ -0.37
SRRM1-221ENST00000593639 SOS1Q07889 1333 aaPredicted RBP12.71□□□□□ -0.37
SRRM1-221ENST00000593639 MYH14Q7Z406 1995 aaKnown RBP12.71□□□□□ -0.37
SRRM1-221ENST00000593639 NFKBIEO00221 500 aa12.71□□□□□ -0.37
SRRM1-221ENST00000593639 ZPR1O75312 459 aa12.71□□□□□ -0.37
SRRM1-221ENST00000593639 DNAJC10Q8IXB1 793 aa12.71□□□□□ -0.37
SRRM1-221ENST00000593639 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms