RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
SMCO4P1-201ENST00000592909 SPG7Q9UQ90 795 aa14.22□□□□□ -0.13
SMCO4P1-201ENST00000592909 DPEP1P16444 411 aa14.21□□□□□ -0.13
SMCO4P1-201ENST00000592909 C16orf71Q8IYS4 520 aaPredicted RBP14.21□□□□□ -0.13
SMCO4P1-201ENST00000592909 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.13
SMCO4P1-201ENST00000592909 NCAPD2Q15021 1401 aa14.21□□□□□ -0.13
SMCO4P1-201ENST00000592909 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
SMCO4P1-201ENST00000592909 FCHSD2O94868 740 aa14.2□□□□□ -0.14
SMCO4P1-201ENST00000592909 HTRA3P83110 453 aa14.2□□□□□ -0.14
SMCO4P1-201ENST00000592909 C9orf131Q5VYM1 1079 aa14.2□□□□□ -0.14
SMCO4P1-201ENST00000592909 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
SMCO4P1-201ENST00000592909 RTCBQ9Y3I0 505 aaKnown RBP14.2□□□□□ -0.14
SMCO4P1-201ENST00000592909 MAP2P11137 1827 aaKnown RBP14.2□□□□□ -0.14
SMCO4P1-201ENST00000592909 ADRA2BP18089 450 aa14.19□□□□□ -0.14
SMCO4P1-201ENST00000592909 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
SMCO4P1-201ENST00000592909 KCNA3P22001 575 aa14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 PRELPP51888 382 aa14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 RC3H1Q5TC82 1133 aaKnown RBP14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 ITGB4P16144 1822 aa14.18□□□□□ -0.14
SMCO4P1-201ENST00000592909 KDM2BQ8NHM5 1336 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 GYS1P13807 737 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 PHKG2P15735 406 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 TNS4Q8IZW8 715 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 EMILIN1Q9Y6C2 1016 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 KIF13BQ9NQT8 1826 aa14.17□□□□□ -0.14
SMCO4P1-201ENST00000592909 KIAA1551Q9HCM1 1747 aa14.16□□□□□ -0.14
SMCO4P1-201ENST00000592909 DCAF5Q96JK2 942 aa14.16□□□□□ -0.14
SMCO4P1-201ENST00000592909 SLC4A9Q96Q91 983 aa14.16□□□□□ -0.14
SMCO4P1-201ENST00000592909 EYA1Q99502 592 aa14.16□□□□□ -0.14
SMCO4P1-201ENST00000592909 PIM2Q9P1W9 311 aa14.16□□□□□ -0.14
SMCO4P1-201ENST00000592909 KDRP35968 1356 aa14.16□□□□□ -0.14
SMCO4P1-201ENST00000592909 WASHC2AQ641Q2 1341 aa14.15□□□□□ -0.14
SMCO4P1-201ENST00000592909 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.14
SMCO4P1-201ENST00000592909 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
SMCO4P1-201ENST00000592909 RPS6KA4O75676 772 aa14.15□□□□□ -0.14
SMCO4P1-201ENST00000592909 CAPN15O75808 1086 aa14.15□□□□□ -0.14
SMCO4P1-201ENST00000592909 RFC4P35249 363 aa14.15□□□□□ -0.14
SMCO4P1-201ENST00000592909 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.15
SMCO4P1-201ENST00000592909 DALRD3Q5D0E6 543 aaKnown RBP14.14□□□□□ -0.15
SMCO4P1-201ENST00000592909 SMC1BQ8NDV3 1235 aa14.14□□□□□ -0.15
SMCO4P1-201ENST00000592909 RRAGCQ9HB90 399 aa14.14□□□□□ -0.15
SMCO4P1-201ENST00000592909 ERVV-2B6SEH9 535 aa14.13□□□□□ -0.15
SMCO4P1-201ENST00000592909 RNF181Q9P0P0 153 aa14.13□□□□□ -0.15
SMCO4P1-201ENST00000592909 KCPQ6ZWJ8 1503 aa14.13□□□□□ -0.15
SMCO4P1-201ENST00000592909 N4BP2Q86UW6 1770 aaPredicted RBP14.12□□□□□ -0.15
SMCO4P1-201ENST00000592909 PPM1GO15355 546 aaPredicted RBP14.12□□□□□ -0.15
SMCO4P1-201ENST00000592909 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
SMCO4P1-201ENST00000592909 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
SMCO4P1-201ENST00000592909 C4AP0C0L4 1744 aa14.11□□□□□ -0.15
SMCO4P1-201ENST00000592909 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
SMCO4P1-201ENST00000592909 ZC3H4Q9UPT8 1303 aaKnown RBP14.1□□□□□ -0.15
SMCO4P1-201ENST00000592909 HSP90AB1P08238 724 aaKnown RBP14.09□□□□□ -0.15
SMCO4P1-201ENST00000592909 HSPA1AP0DMV8 641 aaKnown RBP14.08□□□□□ -0.16
SMCO4P1-201ENST00000592909 HSPA1BP0DMV9 641 aaKnown RBP14.08□□□□□ -0.16
SMCO4P1-201ENST00000592909 DDR1Q08345 913 aa14.08□□□□□ -0.16
SMCO4P1-201ENST00000592909 FKBP8Q14318 412 aa14.08□□□□□ -0.16
SMCO4P1-201ENST00000592909 POLKQ9UBT6 870 aa14.08□□□□□ -0.16
SMCO4P1-201ENST00000592909 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
SMCO4P1-201ENST00000592909 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
SMCO4P1-201ENST00000592909 VEGFAP15692 232 aaPredicted RBP14.07□□□□□ -0.16
SMCO4P1-201ENST00000592909 CHRNA5P30532 468 aa14.07□□□□□ -0.16
SMCO4P1-201ENST00000592909 SRP68Q9UHB9 627 aaKnown RBP14.07□□□□□ -0.16
SMCO4P1-201ENST00000592909 USP42Q9H9J4 1324 aaKnown RBP14.07□□□□□ -0.16
SMCO4P1-201ENST00000592909 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
SMCO4P1-201ENST00000592909 GLTPD2A6NH11 291 aa14.06□□□□□ -0.16
SMCO4P1-201ENST00000592909 TM4SF1P30408 202 aa14.06□□□□□ -0.16
SMCO4P1-201ENST00000592909 CRKLP46109 303 aaKnown RBP14.06□□□□□ -0.16
SMCO4P1-201ENST00000592909 EIF4A2Q14240 407 aaKnown RBP14.06□□□□□ -0.16
SMCO4P1-201ENST00000592909 KDM6AO15550 1401 aaPredicted RBP14.06□□□□□ -0.16
SMCO4P1-201ENST00000592909 POLRMTO00411 1230 aaKnown RBP14.05□□□□□ -0.16
SMCO4P1-201ENST00000592909 CABP4P57796 275 aa14.05□□□□□ -0.16
SMCO4P1-201ENST00000592909 KIF20BQ96Q89 1820 aa14.04□□□□□ -0.16
SMCO4P1-201ENST00000592909 LMNB1P20700 586 aa14.04□□□□□ -0.16
SMCO4P1-201ENST00000592909 PLEKHO1Q53GL0 409 aaPredicted RBP14.04□□□□□ -0.16
SMCO4P1-201ENST00000592909 PTCD1O75127 700 aaKnown RBP14.03□□□□□ -0.16
SMCO4P1-201ENST00000592909 RASSF7Q02833 373 aa14.03□□□□□ -0.16
SMCO4P1-201ENST00000592909 AMOTQ4VCS5 1084 aa14.03□□□□□ -0.16
SMCO4P1-201ENST00000592909 ANKRD26Q9UPS8 1709 aa14.02□□□□□ -0.16
SMCO4P1-201ENST00000592909 TNRC6CQ9HCJ0 1690 aaKnown RBP14.02□□□□□ -0.16
SMCO4P1-201ENST00000592909 ZNF530Q6P9A1 599 aaPredicted RBP14.02□□□□□ -0.17
SMCO4P1-201ENST00000592909 INTS5Q6P9B9 1019 aaKnown RBP14.02□□□□□ -0.17
SMCO4P1-201ENST00000592909 COL5A3P25940 1745 aaPredicted RBP14.01□□□□□ -0.17
SMCO4P1-201ENST00000592909 MTHFSP49914 203 aa14.01□□□□□ -0.17
SMCO4P1-201ENST00000592909 MYH14Q7Z406 1995 aaKnown RBP14.01□□□□□ -0.17
SMCO4P1-201ENST00000592909 PCNTO95613 3336 aa14□□□□□ -0.17
SMCO4P1-201ENST00000592909 POTECB2RU33 542 aa14□□□□□ -0.17
SMCO4P1-201ENST00000592909 ZPR1O75312 459 aa14□□□□□ -0.17
SMCO4P1-201ENST00000592909 USPL1Q5W0Q7 1092 aa14□□□□□ -0.17
SMCO4P1-201ENST00000592909 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
SMCO4P1-201ENST00000592909 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
SMCO4P1-201ENST00000592909 SBF1O95248 1867 aa13.99□□□□□ -0.17
SMCO4P1-201ENST00000592909 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
SMCO4P1-201ENST00000592909 NFIXQ14938 502 aa13.98□□□□□ -0.17
SMCO4P1-201ENST00000592909 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
SMCO4P1-201ENST00000592909 NARFQ9UHQ1 456 aa13.98□□□□□ -0.17
SMCO4P1-201ENST00000592909 NFKBIEO00221 500 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms