RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 BRCA1P38398 1863 aaKnown RBP31.4■■■□□ 2.62
LSM7-206ENST00000591515 APLP1P51693 650 aa31.39■■■□□ 2.62
LSM7-206ENST00000591515 MORC1Q86VD1 984 aa31.39■■■□□ 2.62
LSM7-206ENST00000591515 WDR90Q96KV7 1748 aa31.38■■■□□ 2.61
LSM7-206ENST00000591515 NPC1L1Q9UHC9 1359 aa31.38■■■□□ 2.61
LSM7-206ENST00000591515 NCAPD2Q15021 1401 aa31.38■■■□□ 2.61
LSM7-206ENST00000591515 LOC102724428A0A0B4J2F2 783 aa31.37■■■□□ 2.61
LSM7-206ENST00000591515 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
LSM7-206ENST00000591515 SIK1P57059 783 aa31.37■■■□□ 2.61
LSM7-206ENST00000591515 AMER1Q5JTC6 1135 aaPredicted RBP31.37■■■□□ 2.61
LSM7-206ENST00000591515 KIF24Q5T7B8 1368 aa31.37■■■□□ 2.61
LSM7-206ENST00000591515 NKX1-1Q15270 411 aaPredicted RBP31.35■■■□□ 2.61
LSM7-206ENST00000591515 DNAJC5GQ8N7S2 189 aa31.35■■■□□ 2.61
LSM7-206ENST00000591515 GNPATO15228 680 aa31.33■■■□□ 2.61
LSM7-206ENST00000591515 ITPK1Q13572 414 aa31.33■■■□□ 2.61
LSM7-206ENST00000591515 TOMM70O94826 608 aa31.32■■■□□ 2.6
LSM7-206ENST00000591515 MMP10P09238 476 aa31.32■■■□□ 2.6
LSM7-206ENST00000591515 ARFGEF1Q9Y6D6 1849 aa31.3■■■□□ 2.6
LSM7-206ENST00000591515 C10orf71Q711Q0 1435 aa31.3■■■□□ 2.6
LSM7-206ENST00000591515 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
LSM7-206ENST00000591515 CC2D1BQ5T0F9 858 aaKnown RBP31.29■■■□□ 2.6
LSM7-206ENST00000591515 ASAP1Q9ULH1 1129 aa31.29■■■□□ 2.6
LSM7-206ENST00000591515 C4AP0C0L4 1744 aa31.28■■■□□ 2.6
LSM7-206ENST00000591515 COL5A3P25940 1745 aaPredicted RBP31.28■■■□□ 2.6
LSM7-206ENST00000591515 EMILIN1Q9Y6C2 1016 aa31.28■■■□□ 2.6
LSM7-206ENST00000591515 TNNT2P45379 298 aaPredicted RBP31.27■■■□□ 2.6
LSM7-206ENST00000591515 NMRK2Q9NPI5 230 aa31.27■■■□□ 2.6
LSM7-206ENST00000591515 TMOD3Q9NYL9 352 aa31.27■■■□□ 2.6
LSM7-206ENST00000591515 BCS1LQ9Y276 419 aa31.27■■■□□ 2.6
LSM7-206ENST00000591515 ATP6V1AP38606 617 aa31.26■■■□□ 2.59
LSM7-206ENST00000591515 SPG7Q9UQ90 795 aa31.26■■■□□ 2.59
LSM7-206ENST00000591515 ZNF831Q5JPB2 1677 aa31.25■■■□□ 2.59
LSM7-206ENST00000591515 TGFB2P61812 414 aa31.25■■■□□ 2.59
LSM7-206ENST00000591515 A0A0G2JLW4 131 aa31.24■■■□□ 2.59
LSM7-206ENST00000591515 KDRP35968 1356 aa31.23■■■□□ 2.59
LSM7-206ENST00000591515 PPM1GO15355 546 aaPredicted RBP31.23■■■□□ 2.59
LSM7-206ENST00000591515 ARHGAP27Q6ZUM4 889 aa31.21■■■□□ 2.59
LSM7-206ENST00000591515 ATG3Q9NT62 314 aa31.21■■■□□ 2.59
LSM7-206ENST00000591515 POLKQ9UBT6 870 aa31.21■■■□□ 2.59
LSM7-206ENST00000591515 MYH14Q7Z406 1995 aaKnown RBP31.21■■■□□ 2.59
LSM7-206ENST00000591515 CNGB1Q14028 1251 aaPredicted RBP31.19■■■□□ 2.58
LSM7-206ENST00000591515 PHKG2P15735 406 aa31.18■■■□□ 2.58
LSM7-206ENST00000591515 DPEP1P16444 411 aa31.18■■■□□ 2.58
LSM7-206ENST00000591515 RBM46Q8TBY0 533 aaKnown RBP31.18■■■□□ 2.58
LSM7-206ENST00000591515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.18■■■□□ 2.58
LSM7-206ENST00000591515 NLGN1Q8N2Q7 840 aa31.17■■■□□ 2.58
LSM7-206ENST00000591515 EYA1Q99502 592 aa31.17■■■□□ 2.58
LSM7-206ENST00000591515 SBF1O95248 1867 aa31.16■■■□□ 2.58
LSM7-206ENST00000591515 FCHSD2O94868 740 aa31.16■■■□□ 2.58
LSM7-206ENST00000591515 HTRA3P83110 453 aa31.16■■■□□ 2.58
LSM7-206ENST00000591515 TRAPPC3LQ5T215 181 aa31.16■■■□□ 2.58
LSM7-206ENST00000591515 IFNL2Q8IZJ0 200 aa31.16■■■□□ 2.58
LSM7-206ENST00000591515 RTCBQ9Y3I0 505 aaKnown RBP31.16■■■□□ 2.58
LSM7-206ENST00000591515 SLC4A9Q96Q91 983 aa31.15■■■□□ 2.58
LSM7-206ENST00000591515 CCDC87Q9NVE4 849 aa31.15■■■□□ 2.58
LSM7-206ENST00000591515 PLEKHG2Q9H7P9 1386 aa31.14■■■□□ 2.58
LSM7-206ENST00000591515 TNRC6CQ9HCJ0 1690 aaKnown RBP31.13■■■□□ 2.57
LSM7-206ENST00000591515 GYS1P13807 737 aa31.13■■■□□ 2.57
LSM7-206ENST00000591515 C9orf131Q5VYM1 1079 aa31.13■■■□□ 2.57
LSM7-206ENST00000591515 ARHGEF1Q92888 912 aaKnown RBP31.13■■■□□ 2.57
LSM7-206ENST00000591515 KLRG1Q96E93 195 aa31.13■■■□□ 2.57
LSM7-206ENST00000591515 KCPQ6ZWJ8 1503 aa31.13■■■□□ 2.57
LSM7-206ENST00000591515 ADRA2BP18089 450 aa31.11■■■□□ 2.57
LSM7-206ENST00000591515 KCNA3P22001 575 aa31.11■■■□□ 2.57
LSM7-206ENST00000591515 COL13A1Q5TAT6 717 aaPredicted RBP31.11■■■□□ 2.57
LSM7-206ENST00000591515 JMYQ8N9B5 988 aa31.11■■■□□ 2.57
LSM7-206ENST00000591515 PCNTO95613 3336 aa31.1■■■□□ 2.57
LSM7-206ENST00000591515 CNTNAP4Q9C0A0 1308 aa31.08■■■□□ 2.57
LSM7-206ENST00000591515 RALBP1Q15311 655 aa31.08■■■□□ 2.57
LSM7-206ENST00000591515 RC3H1Q5TC82 1133 aaKnown RBP31.08■■■□□ 2.57
LSM7-206ENST00000591515 C16orf71Q8IYS4 520 aaPredicted RBP31.08■■■□□ 2.57
LSM7-206ENST00000591515 RBM42Q9BTD8 480 aaKnown RBP31.08■■■□□ 2.57
LSM7-206ENST00000591515 PARP3Q9Y6F1 533 aa31.08■■■□□ 2.57
LSM7-206ENST00000591515 MTHFSP49914 203 aa31.07■■■□□ 2.56
LSM7-206ENST00000591515 FSTL1Q12841 308 aa31.07■■■□□ 2.56
LSM7-206ENST00000591515 RFC4P35249 363 aa31.06■■■□□ 2.56
LSM7-206ENST00000591515 RPS6KA4O75676 772 aa31.05■■■□□ 2.56
LSM7-206ENST00000591515 CFAP53Q96M91 514 aa31.05■■■□□ 2.56
LSM7-206ENST00000591515 DCAF5Q96JK2 942 aa31.04■■■□□ 2.56
LSM7-206ENST00000591515 PIM2Q9P1W9 311 aa31.03■■■□□ 2.56
LSM7-206ENST00000591515 TJP1Q07157 1748 aa31.03■■■□□ 2.56
LSM7-206ENST00000591515 KDM2BQ8NHM5 1336 aa31.02■■■□□ 2.56
LSM7-206ENST00000591515 ERVV-2B6SEH9 535 aa31.01■■■□□ 2.55
LSM7-206ENST00000591515 PPP2R1AP30153 589 aa31.01■■■□□ 2.55
LSM7-206ENST00000591515 RNF181Q9P0P0 153 aa31.01■■■□□ 2.55
LSM7-206ENST00000591515 ADAMTS7Q9UKP4 1686 aa31■■■□□ 2.55
LSM7-206ENST00000591515 KDM6AO15550 1401 aaPredicted RBP31■■■□□ 2.55
LSM7-206ENST00000591515 EIF4A2Q14240 407 aaKnown RBP31■■■□□ 2.55
LSM7-206ENST00000591515 CAPN15O75808 1086 aa30.99■■■□□ 2.55
LSM7-206ENST00000591515 DALRD3Q5D0E6 543 aaKnown RBP30.99■■■□□ 2.55
LSM7-206ENST00000591515 RRAGCQ9HB90 399 aa30.99■■■□□ 2.55
LSM7-206ENST00000591515 SRP68Q9UHB9 627 aaKnown RBP30.98■■■□□ 2.55
LSM7-206ENST00000591515 DDR1Q08345 913 aa30.97■■■□□ 2.55
LSM7-206ENST00000591515 CCDC88AQ3V6T2 1871 aa30.97■■■□□ 2.55
LSM7-206ENST00000591515 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
LSM7-206ENST00000591515 FKBP8Q14318 412 aa30.96■■■□□ 2.55
LSM7-206ENST00000591515 AFDNP55196 1824 aaKnown RBP30.96■■■□□ 2.55
LSM7-206ENST00000591515 CHRNA5P30532 468 aa30.95■■■□□ 2.55
LSM7-206ENST00000591515 USP42Q9H9J4 1324 aaKnown RBP30.95■■■□□ 2.54
LSM7-206ENST00000591515 HSP90AB1P08238 724 aaKnown RBP30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms