RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 WNT2BQ93097 391 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 DDRGK1Q96HY6 314 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 LRCH3Q96II8 777 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.24□□□□□ -1.09
LINC01539-202ENST00000589293 LAMC1P11047 1609 aa8.24□□□□□ -1.09
LINC01539-202ENST00000589293 TMEM132EQ6IEE7 984 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 KRT28Q7Z3Y7 464 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 RDH13Q8NBN7 331 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 ANKK1Q8NFD2 765 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 SPIRE2Q8WWL2 714 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 POGKQ9P215 609 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 ADGRF5Q8IZF2 1346 aa8.23□□□□□ -1.09
LINC01539-202ENST00000589293 DHX57Q6P158 1386 aaKnown RBP8.22□□□□□ -1.09
LINC01539-202ENST00000589293 PPLO60437 1756 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 COL22A1Q8NFW1 1626 aaPredicted RBP8.22□□□□□ -1.09
LINC01539-202ENST00000589293 MYOM2P54296 1465 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 RNF40O75150 1001 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 MYSM1Q5VVJ2 828 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 SPNS2Q8IVW8 549 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 HLA-CQ95604 372 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
LINC01539-202ENST00000589293 MPHOSPH9Q99550 1183 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 TBC1D2Q9BYX2 928 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 ABCC11Q96J66 1382 aa8.22□□□□□ -1.09
LINC01539-202ENST00000589293 PXDNQ92626 1479 aa8.21□□□□□ -1.09
LINC01539-202ENST00000589293 CFHP08603 1231 aa8.21□□□□□ -1.1
LINC01539-202ENST00000589293 APLP1P51693 650 aa8.21□□□□□ -1.1
LINC01539-202ENST00000589293 SAFB2Q14151 953 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINC01539-202ENST00000589293 WBP1LQ9NX94 342 aa8.21□□□□□ -1.1
LINC01539-202ENST00000589293 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
LINC01539-202ENST00000589293 SPATA31A3Q5VYP0 1347 aa8.21□□□□□ -1.1
LINC01539-202ENST00000589293 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
LINC01539-202ENST00000589293 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
LINC01539-202ENST00000589293 KIF1AQ12756 1690 aa8.2□□□□□ -1.1
LINC01539-202ENST00000589293 ARHGEF10O15013 1369 aa8.2□□□□□ -1.1
LINC01539-202ENST00000589293 TECPR2O15040 1411 aa8.2□□□□□ -1.1
LINC01539-202ENST00000589293 BLMP54132 1417 aaPredicted RBP8.2□□□□□ -1.1
LINC01539-202ENST00000589293 MOXD2PA6NHM9 499 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 GOLGA8CPA6NN73 597 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 SH3D19Q5HYK7 790 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 SEPT12Q8IYM1 358 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 STAC3Q96MF2 364 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 LIMD1Q9UGP4 676 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 GPRASP1Q5JY77 1395 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 TNS3Q68CZ2 1445 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 RALGAPBQ86X10 1494 aa8.19□□□□□ -1.1
LINC01539-202ENST00000589293 MARF1Q9Y4F3 1742 aaKnown RBP8.18□□□□□ -1.1
LINC01539-202ENST00000589293 KDM4AO75164 1064 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 NDUFV2P19404 249 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 BAG6P46379 1132 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 GUCA2AQ02747 115 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 FUT2Q10981 343 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 VPS72Q15906 364 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 KRT27Q7Z3Y8 459 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-202ENST00000589293 PRAM1Q96QH2 718 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 C14orf93Q9H972 538 aaKnown RBP8.18□□□□□ -1.1
LINC01539-202ENST00000589293 TSR3Q9UJK0 312 aaKnown RBP8.18□□□□□ -1.1
LINC01539-202ENST00000589293 EIF3AQ14152 1382 aaKnown RBP8.18□□□□□ -1.1
LINC01539-202ENST00000589293 PLEKHH1Q9ULM0 1364 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 PIK3C2GO75747 1445 aa8.18□□□□□ -1.1
LINC01539-202ENST00000589293 HOXA2O43364 376 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 CFAP70Q5T0N1 1121 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 NGDNQ8NEJ9 315 aaKnown RBP8.17□□□□□ -1.1
LINC01539-202ENST00000589293 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 CABLES1Q8TDN4 633 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 GOPCQ9HD26 462 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 SBNO1A3KN83 1393 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 SPATA31E1Q6ZUB1 1445 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 KNDC1Q76NI1 1749 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 FMN2Q9NZ56 1722 aa8.17□□□□□ -1.1
LINC01539-202ENST00000589293 SLIT2O94813 1529 aa8.16□□□□□ -1.1
LINC01539-202ENST00000589293 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
LINC01539-202ENST00000589293 USP32Q8NFA0 1604 aa8.16□□□□□ -1.1
LINC01539-202ENST00000589293 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.16□□□□□ -1.1
LINC01539-202ENST00000589293 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
LINC01539-202ENST00000589293 PCDHGC3Q9UN70 934 aa8.16□□□□□ -1.1
LINC01539-202ENST00000589293 ACTN4O43707 911 aaKnown RBP8.15□□□□□ -1.1
LINC01539-202ENST00000589293 PPP4CP60510 307 aa8.15□□□□□ -1.1
LINC01539-202ENST00000589293 SKIV2LQ15477 1246 aaKnown RBP8.15□□□□□ -1.1
LINC01539-202ENST00000589293 DEFB132Q7Z7B7 95 aa8.15□□□□□ -1.1
LINC01539-202ENST00000589293 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC01539-202ENST00000589293 BTG4Q9NY30 223 aa8.15□□□□□ -1.1
LINC01539-202ENST00000589293 TRAK1Q9UPV9 953 aa8.15□□□□□ -1.1
LINC01539-202ENST00000589293 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
LINC01539-202ENST00000589293 NRXN1Q9ULB1 1477 aa8.14□□□□□ -1.11
LINC01539-202ENST00000589293 ANKARQ7Z5J8 1434 aa8.14□□□□□ -1.11
LINC01539-202ENST00000589293 SPTLC1O15269 473 aa8.14□□□□□ -1.11
LINC01539-202ENST00000589293 PUS10Q3MIT2 529 aaKnown RBP8.14□□□□□ -1.11
LINC01539-202ENST00000589293 HIRIP3Q9BW71 556 aaPredicted RBP8.14□□□□□ -1.11
LINC01539-202ENST00000589293 PRDM11Q9NQV5 511 aa8.14□□□□□ -1.11
LINC01539-202ENST00000589293 IFT172Q9UG01 1749 aa8.14□□□□□ -1.11
LINC01539-202ENST00000589293 GLI3P10071 1580 aa8.14□□□□□ -1.11
LINC01539-202ENST00000589293 FAM83GA6ND36 823 aa8.13□□□□□ -1.11
LINC01539-202ENST00000589293 CLK2P49760 499 aaKnown RBP8.13□□□□□ -1.11
LINC01539-202ENST00000589293 PTPN5P54829 565 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms