RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 BRCA1P38398 1863 aaKnown RBP19.88■□□□□ 0.77
CSNK1D-224ENST00000584672 FLT4P35916 1363 aa19.88■□□□□ 0.77
CSNK1D-224ENST00000584672 DPEP1P16444 411 aa19.88■□□□□ 0.77
CSNK1D-224ENST00000584672 C9orf131Q5VYM1 1079 aa19.88■□□□□ 0.77
CSNK1D-224ENST00000584672 TNS4Q8IZW8 715 aa19.88■□□□□ 0.77
CSNK1D-224ENST00000584672 TMOD3Q9NYL9 352 aa19.88■□□□□ 0.77
CSNK1D-224ENST00000584672 KCPQ6ZWJ8 1503 aa19.87■□□□□ 0.77
CSNK1D-224ENST00000584672 TGFB2P61812 414 aa19.87■□□□□ 0.77
CSNK1D-224ENST00000584672 TESK2Q96S53 571 aa19.87■□□□□ 0.77
CSNK1D-224ENST00000584672 C4AP0C0L4 1744 aa19.86■□□□□ 0.77
CSNK1D-224ENST00000584672 ST20-MTHFSA0A0A6YYL1 179 aa19.86■□□□□ 0.77
CSNK1D-224ENST00000584672 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
CSNK1D-224ENST00000584672 EMILIN1Q9Y6C2 1016 aa19.85■□□□□ 0.77
CSNK1D-224ENST00000584672 TMF1P82094 1093 aa19.84■□□□□ 0.77
CSNK1D-224ENST00000584672 CCDC87Q9NVE4 849 aa19.84■□□□□ 0.77
CSNK1D-224ENST00000584672 SPG7Q9UQ90 795 aa19.84■□□□□ 0.77
CSNK1D-224ENST00000584672 ARFGEF1Q9Y6D6 1849 aa19.83■□□□□ 0.77
CSNK1D-224ENST00000584672 PPM1GO15355 546 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-224ENST00000584672 NKX1-1Q15270 411 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-224ENST00000584672 TRAPPC3LQ5T215 181 aa19.83■□□□□ 0.77
CSNK1D-224ENST00000584672 RTCBQ9Y3I0 505 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-224ENST00000584672 NLGN1Q8N2Q7 840 aa19.82■□□□□ 0.76
CSNK1D-224ENST00000584672 RRAGCQ9HB90 399 aa19.82■□□□□ 0.76
CSNK1D-224ENST00000584672 ATG3Q9NT62 314 aa19.82■□□□□ 0.76
CSNK1D-224ENST00000584672 PLEKHG2Q9H7P9 1386 aa19.82■□□□□ 0.76
CSNK1D-224ENST00000584672 FSTL1Q12841 308 aa19.81■□□□□ 0.76
CSNK1D-224ENST00000584672 RNF181Q9P0P0 153 aa19.81■□□□□ 0.76
CSNK1D-224ENST00000584672 ARHGEF1Q92888 912 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-224ENST00000584672 RBM42Q9BTD8 480 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-224ENST00000584672 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
CSNK1D-224ENST00000584672 KDM2BQ8NHM5 1336 aa19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 TNRC6CQ9HCJ0 1690 aaKnown RBP19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 GYS1P13807 737 aa19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 KCNA3P22001 575 aa19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 PRELPP51888 382 aa19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 KDRP35968 1356 aa19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 COL5A3P25940 1745 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-224ENST00000584672 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
CSNK1D-224ENST00000584672 PHKG2P15735 406 aa19.78■□□□□ 0.76
CSNK1D-224ENST00000584672 KIF24Q5T7B8 1368 aa19.78■□□□□ 0.76
CSNK1D-224ENST00000584672 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
CSNK1D-224ENST00000584672 PCNTO95613 3336 aa19.77■□□□□ 0.76
CSNK1D-224ENST00000584672 RFC4P35249 363 aa19.77■□□□□ 0.76
CSNK1D-224ENST00000584672 IFNL2Q8IZJ0 200 aa19.76■□□□□ 0.75
CSNK1D-224ENST00000584672 EYA1Q99502 592 aa19.76■□□□□ 0.75
CSNK1D-224ENST00000584672 PIM2Q9P1W9 311 aa19.76■□□□□ 0.75
CSNK1D-224ENST00000584672 SBF1O95248 1867 aa19.75■□□□□ 0.75
CSNK1D-224ENST00000584672 CHRNA5P30532 468 aa19.75■□□□□ 0.75
CSNK1D-224ENST00000584672 DALRD3Q5D0E6 543 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-224ENST00000584672 DCAF5Q96JK2 942 aa19.75■□□□□ 0.75
CSNK1D-224ENST00000584672 MYH14Q7Z406 1995 aaKnown RBP19.75■□□□□ 0.75
CSNK1D-224ENST00000584672 ANKRD26Q9UPS8 1709 aa19.74■□□□□ 0.75
CSNK1D-224ENST00000584672 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-224ENST00000584672 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-224ENST00000584672 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-224ENST00000584672 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
CSNK1D-224ENST00000584672 RPS6KA4O75676 772 aa19.72■□□□□ 0.75
CSNK1D-224ENST00000584672 ADRA2BP18089 450 aa19.72■□□□□ 0.75
CSNK1D-224ENST00000584672 RASSF7Q02833 373 aa19.72■□□□□ 0.75
CSNK1D-224ENST00000584672 DDR1Q08345 913 aa19.71■□□□□ 0.75
CSNK1D-224ENST00000584672 RC3H1Q5TC82 1133 aaKnown RBP19.71■□□□□ 0.75
CSNK1D-224ENST00000584672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.71■□□□□ 0.75
CSNK1D-224ENST00000584672 ZNF831Q5JPB2 1677 aa19.71■□□□□ 0.75
CSNK1D-224ENST00000584672 CNTNAP4Q9C0A0 1308 aa19.71■□□□□ 0.75
CSNK1D-224ENST00000584672 FKBP8Q14318 412 aa19.7■□□□□ 0.74
CSNK1D-224ENST00000584672 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
CSNK1D-224ENST00000584672 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
CSNK1D-224ENST00000584672 PTCD1O75127 700 aaKnown RBP19.68■□□□□ 0.74
CSNK1D-224ENST00000584672 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
CSNK1D-224ENST00000584672 TIAM2Q8IVF5 1701 aa19.66■□□□□ 0.74
CSNK1D-224ENST00000584672 CRKLP46109 303 aaKnown RBP19.66■□□□□ 0.74
CSNK1D-224ENST00000584672 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
CSNK1D-224ENST00000584672 CCDC88AQ3V6T2 1871 aa19.65■□□□□ 0.74
CSNK1D-224ENST00000584672 ERVV-2B6SEH9 535 aa19.65■□□□□ 0.74
CSNK1D-224ENST00000584672 KDM6AO15550 1401 aaPredicted RBP19.65■□□□□ 0.74
CSNK1D-224ENST00000584672 TJP1Q07157 1748 aa19.65■□□□□ 0.74
CSNK1D-224ENST00000584672 TNNT2P45379 298 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-224ENST00000584672 CABP4P57796 275 aa19.64■□□□□ 0.73
CSNK1D-224ENST00000584672 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
CSNK1D-224ENST00000584672 POLKQ9UBT6 870 aa19.63■□□□□ 0.73
CSNK1D-224ENST00000584672 POLRMTO00411 1230 aaKnown RBP19.62■□□□□ 0.73
CSNK1D-224ENST00000584672 VEGFAP15692 232 aaPredicted RBP19.62■□□□□ 0.73
CSNK1D-224ENST00000584672 ZNF530Q6P9A1 599 aaPredicted RBP19.62■□□□□ 0.73
CSNK1D-224ENST00000584672 AFDNP55196 1824 aaKnown RBP19.62■□□□□ 0.73
CSNK1D-224ENST00000584672 ADAMTS7Q9UKP4 1686 aa19.61■□□□□ 0.73
CSNK1D-224ENST00000584672 GLTPD2A6NH11 291 aa19.6■□□□□ 0.73
CSNK1D-224ENST00000584672 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-224ENST00000584672 LMNB1P20700 586 aa19.6■□□□□ 0.73
CSNK1D-224ENST00000584672 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.72
CSNK1D-224ENST00000584672 USPL1Q5W0Q7 1092 aa19.58■□□□□ 0.72
CSNK1D-224ENST00000584672 MKRN1Q9UHC7 482 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-224ENST00000584672 DLEC1Q9Y238 1755 aa19.57■□□□□ 0.72
CSNK1D-224ENST00000584672 ZC3H4Q9UPT8 1303 aaKnown RBP19.57■□□□□ 0.72
CSNK1D-224ENST00000584672 TM4SF1P30408 202 aa19.57■□□□□ 0.72
CSNK1D-224ENST00000584672 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
CSNK1D-224ENST00000584672 NFATC2IPQ8NCF5 419 aa19.57■□□□□ 0.72
CSNK1D-224ENST00000584672 ZPR1O75312 459 aa19.56■□□□□ 0.72
CSNK1D-224ENST00000584672 MTHFSP49914 203 aa19.56■□□□□ 0.72
CSNK1D-224ENST00000584672 INTS5Q6P9B9 1019 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms