RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-209	ENST00000580904	KIAA1210	Q9ULL0	1709 aa		10.21	□□□□□ -0.78
PSMD11-209	ENST00000580904	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	NUTM2E	B1AL46	878 aa	Predicted RBP	10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	ITGBL1	O95965	494 aa	Predicted RBP	10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	CFAP70	Q5T0N1	1121 aa		10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	ADAMTS13	Q76LX8	1427 aa		10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	ALK	Q9UM73	1620 aa		10.2	□□□□□ -0.78
PSMD11-209	ENST00000580904	NPHP4	O75161	1426 aa	Predicted RBP	10.19	□□□□□ -0.78
PSMD11-209	ENST00000580904	MTMR2	Q13614	643 aa		10.19	□□□□□ -0.78
PSMD11-209	ENST00000580904	NBPF1	Q3BBV0	1214 aa		10.19	□□□□□ -0.78
PSMD11-209	ENST00000580904	STRC	Q7RTU9	1775 aa		10.19	□□□□□ -0.78
PSMD11-209	ENST00000580904	SETD1A	O15047	1707 aa	Known RBP	10.19	□□□□□ -0.78
PSMD11-209	ENST00000580904	DIP2A	Q14689	1571 aa		10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	ROCK2	O75116	1388 aa	Known RBP	10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	GPRASP1	Q5JY77	1395 aa		10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	SLC26A8	Q96RN1	970 aa		10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	SPSB2	Q99619	263 aa		10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	LIMD1	Q9UGP4	676 aa		10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	ADGRB1	O14514	1584 aa		10.18	□□□□□ -0.78
PSMD11-209	ENST00000580904	ASXL1	Q8IXJ9	1541 aa		10.17	□□□□□ -0.78
PSMD11-209	ENST00000580904	CSPP1	Q1MSJ5	1256 aa		10.17	□□□□□ -0.78
PSMD11-209	ENST00000580904	BRICD5	Q6PL45	260 aa		10.17	□□□□□ -0.78
PSMD11-209	ENST00000580904	RETREG3	Q86VR2	466 aa		10.17	□□□□□ -0.78
PSMD11-209	ENST00000580904	USB1	Q9BQ65	265 aa	Known RBP	10.17	□□□□□ -0.78
PSMD11-209	ENST00000580904	TBX22	Q9Y458	520 aa		10.17	□□□□□ -0.78
PSMD11-209	ENST00000580904	MET	P08581	1390 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	GGCX	P38435	758 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	GUCA2A	Q02747	115 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	TMEM132E	Q6IEE7	984 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	HLA-C	Q95604	372 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	CARD11	Q9BXL7	1154 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	PCDHGC3	Q9UN70	934 aa		10.16	□□□□□ -0.78
PSMD11-209	ENST00000580904	ADH1B	P00325	375 aa		10.15	□□□□□ -0.78
PSMD11-209	ENST00000580904	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
PSMD11-209	ENST00000580904	PCDHB15	Q9Y5E8	787 aa		10.15	□□□□□ -0.78
PSMD11-209	ENST00000580904	LILRB3	O75022	631 aa		10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	IFFO2	Q5TF58	517 aa		10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	ZNF516	Q92618	1163 aa		10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	THAP11	Q96EK4	314 aa		10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	PIK3R4	Q99570	1358 aa		10.14	□□□□□ -0.79
PSMD11-209	ENST00000580904	HELB	Q8NG08	1087 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMD11-209	ENST00000580904	PTPRU	Q92729	1446 aa		10.13	□□□□□ -0.79
PSMD11-209	ENST00000580904	LRPPRC	P42704	1394 aa	Known RBP	10.13	□□□□□ -0.79
PSMD11-209	ENST00000580904	USP47	Q96K76	1375 aa		10.13	□□□□□ -0.79
PSMD11-209	ENST00000580904	MSS51	Q4VC12	460 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	PPP2R2D	Q66LE6	453 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	RNF19B	Q6ZMZ0	732 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	SLC6A16	Q9GZN6	736 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	PLA2G2E	Q9NZK7	142 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	STK26	Q9P289	416 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	ABCC11	Q96J66	1382 aa		10.12	□□□□□ -0.79
PSMD11-209	ENST00000580904	TECPR2	O15040	1411 aa		10.11	□□□□□ -0.79
PSMD11-209	ENST00000580904	TMEM259	Q4ZIN3	620 aa		10.11	□□□□□ -0.79
PSMD11-209	ENST00000580904	TRAK1	Q9UPV9	953 aa		10.11	□□□□□ -0.79
PSMD11-209	ENST00000580904	KNDC1	Q76NI1	1749 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	XRN1	Q8IZH2	1706 aa	Known RBP	10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	CHD2	O14647	1828 aa	Known RBP	10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	HSPA5	P11021	654 aa	Known RBP	10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	QPCT	Q16769	361 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	DESI1	Q6ICB0	168 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	PRR7	Q8TB68	274 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	CABLES1	Q8TDN4	633 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	AMOTL2	Q9Y2J4	779 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	CPS1	P31327	1500 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	DLC1	Q96QB1	1528 aa		10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	EIF3A	Q14152	1382 aa	Known RBP	10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.1	□□□□□ -0.79
PSMD11-209	ENST00000580904	NWD1	Q149M9	1564 aa		10.09	□□□□□ -0.79
PSMD11-209	ENST00000580904	KCNA6	P17658	529 aa		10.09	□□□□□ -0.79
PSMD11-209	ENST00000580904	SYMPK	Q92797	1274 aa	Known RBP	10.09	□□□□□ -0.79
PSMD11-209	ENST00000580904	PTCH1	Q13635	1447 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	ST20-MTHFS	A0A0A6YYL1	179 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	TLL1	O43897	1013 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	TSC1	Q92574	1164 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	SIRT1	Q96EB6	747 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	PRAM1	Q96QH2	718 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	ROBO2	Q9HCK4	1378 aa		10.08	□□□□□ -0.8
PSMD11-209	ENST00000580904	FAM135B	Q49AJ0	1406 aa		10.07	□□□□□ -0.8
PSMD11-209	ENST00000580904	RFC5	P40937	340 aa		10.07	□□□□□ -0.8
PSMD11-209	ENST00000580904	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.07	□□□□□ -0.8
PSMD11-209	ENST00000580904	NKTR	P30414	1462 aa	Known RBP	10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	PLEKHH1	Q9ULM0	1364 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	JUND	P17535	347 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	RTL5	Q5HYW3	569 aa	Predicted RBP	10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	WAPL	Q7Z5K2	1190 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	FAM160A2	Q8N612	972 aa	Predicted RBP	10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	NKX2-3	Q8TAU0	364 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	POGK	Q9P215	609 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	STRCP1	A6NGW2	1772 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	QRICH2	Q9H0J4	1663 aa		10.06	□□□□□ -0.8
PSMD11-209	ENST00000580904	SBNO2	Q9Y2G9	1366 aa		10.05	□□□□□ -0.8
PSMD11-209	ENST00000580904	MMP16	P51512	607 aa		10.05	□□□□□ -0.8
PSMD11-209	ENST00000580904	TESK2	Q96S53	571 aa		10.05	□□□□□ -0.8
PSMD11-209	ENST00000580904	APBB1	O00213	710 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms