RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 GDF2Q9UK05 429 aaPredicted RBP8.22□□□□□ -1.09
SMG8-205ENST00000580798 GRIN2CQ14957 1233 aa8.21□□□□□ -1.1
SMG8-205ENST00000580798 LINC00114Q6XXX2 140 aa8.21□□□□□ -1.1
SMG8-205ENST00000580798 RAB6BQ9NRW1 208 aa8.21□□□□□ -1.1
SMG8-205ENST00000580798 PHF24Q9UPV7 400 aa8.21□□□□□ -1.1
SMG8-205ENST00000580798 PCDHB11Q9Y5F2 797 aa8.2□□□□□ -1.1
SMG8-205ENST00000580798 PHKA2P46019 1235 aa8.19□□□□□ -1.1
SMG8-205ENST00000580798 GOLGA6L1Q8N7Z2 621 aa8.19□□□□□ -1.1
SMG8-205ENST00000580798 CNKSR1Q969H4 720 aa8.19□□□□□ -1.1
SMG8-205ENST00000580798 PSMG3-AS1Q96PY0 264 aa8.19□□□□□ -1.1
SMG8-205ENST00000580798 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
SMG8-205ENST00000580798 C2CD2LO14523 706 aa8.18□□□□□ -1.1
SMG8-205ENST00000580798 IL2RAP01589 272 aa8.18□□□□□ -1.1
SMG8-205ENST00000580798 CENPCQ03188 943 aa8.18□□□□□ -1.1
SMG8-205ENST00000580798 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
SMG8-205ENST00000580798 ESYT1Q9BSJ8 1104 aa8.18□□□□□ -1.1
SMG8-205ENST00000580798 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.17□□□□□ -1.1
SMG8-205ENST00000580798 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
SMG8-205ENST00000580798 GNRH1P01148 92 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 AMPD1P23109 780 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 ITGB7P26010 798 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 LBRQ14739 615 aaKnown RBP8.16□□□□□ -1.1
SMG8-205ENST00000580798 SLCO4C1Q6ZQN7 724 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 CD163Q86VB7 1156 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 KRTAP9-2Q9BYQ4 174 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 RUBCNLQ9H714 662 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 GGA1Q9UJY5 639 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 HRH3Q9Y5N1 445 aa8.16□□□□□ -1.1
SMG8-205ENST00000580798 BMP4P12644 408 aa8.15□□□□□ -1.1
SMG8-205ENST00000580798 MCCD1P59942 119 aaPredicted RBP8.15□□□□□ -1.1
SMG8-205ENST00000580798 ABHD17AQ96GS6 310 aa8.15□□□□□ -1.1
SMG8-205ENST00000580798 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
SMG8-205ENST00000580798 ESF1Q9H501 851 aaKnown RBP8.15□□□□□ -1.1
SMG8-205ENST00000580798 ATXN7L1Q9ULK2 861 aaPredicted RBP8.15□□□□□ -1.1
SMG8-205ENST00000580798 GNB5O14775 395 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 CHRNA4P43681 627 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 CTBSQ01459 385 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 NR1H3Q13133 447 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 TMEM259Q4ZIN3 620 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 C4orf17Q53FE4 359 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 NDFIP2Q9NV92 336 aa8.14□□□□□ -1.11
SMG8-205ENST00000580798 BNIP3LO60238 219 aa8.13□□□□□ -1.11
SMG8-205ENST00000580798 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
SMG8-205ENST00000580798 FGFR3P22607 806 aa8.13□□□□□ -1.11
SMG8-205ENST00000580798 MSX1P28360 303 aa8.13□□□□□ -1.11
SMG8-205ENST00000580798 PGBD3Q8N328 593 aa8.13□□□□□ -1.11
SMG8-205ENST00000580798 BTBD6Q96KE9 485 aa8.13□□□□□ -1.11
SMG8-205ENST00000580798 FHDC1Q9C0D6 1143 aaPredicted RBP8.13□□□□□ -1.11
SMG8-205ENST00000580798 PIK3R2O00459 728 aa8.12□□□□□ -1.11
SMG8-205ENST00000580798 EPXP11678 715 aa8.12□□□□□ -1.11
SMG8-205ENST00000580798 DGKGP49619 791 aa8.12□□□□□ -1.11
SMG8-205ENST00000580798 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
SMG8-205ENST00000580798 XAGE2Q96GT9 111 aa8.12□□□□□ -1.11
SMG8-205ENST00000580798 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
SMG8-205ENST00000580798 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
SMG8-205ENST00000580798 TMEM214Q6NUQ4 689 aaKnown RBP8.11□□□□□ -1.11
SMG8-205ENST00000580798 ZNF592Q92610 1267 aa8.1□□□□□ -1.11
SMG8-205ENST00000580798 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
SMG8-205ENST00000580798 NEURL1BA8MQ27 555 aa8.09□□□□□ -1.11
SMG8-205ENST00000580798 GPR37L1O60883 481 aa8.09□□□□□ -1.11
SMG8-205ENST00000580798 RNF135Q8IUD6 432 aa8.09□□□□□ -1.11
SMG8-205ENST00000580798 BCANQ96GW7 911 aa8.09□□□□□ -1.11
SMG8-205ENST00000580798 SEMA6BQ9H3T3 888 aa8.09□□□□□ -1.11
SMG8-205ENST00000580798 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
SMG8-205ENST00000580798 ZNF330Q9Y3S2 320 aaPredicted RBP8.09□□□□□ -1.11
SMG8-205ENST00000580798 ARAFP10398 606 aa8.08□□□□□ -1.12
SMG8-205ENST00000580798 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
SMG8-205ENST00000580798 DOC2BQ14184 412 aa8.08□□□□□ -1.12
SMG8-205ENST00000580798 CCDC85AQ96PX6 553 aaPredicted RBP8.08□□□□□ -1.12
SMG8-205ENST00000580798 CRISPLD1Q9H336 500 aa8.08□□□□□ -1.12
SMG8-205ENST00000580798 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
SMG8-205ENST00000580798 PCMTD1Q96MG8 357 aaPredicted RBP8.07□□□□□ -1.12
SMG8-205ENST00000580798 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
SMG8-205ENST00000580798 CHSY3Q70JA7 882 aa8.06□□□□□ -1.12
SMG8-205ENST00000580798 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
SMG8-205ENST00000580798 RHBDD1Q8TEB9 315 aa8.06□□□□□ -1.12
SMG8-205ENST00000580798 DNAAF2Q9NVR5 837 aaKnown RBP8.06□□□□□ -1.12
SMG8-205ENST00000580798 STAU1O95793 577 aaKnown RBP8.05□□□□□ -1.12
SMG8-205ENST00000580798 ESCO1Q5FWF5 840 aa8.05□□□□□ -1.12
SMG8-205ENST00000580798 ZMYM1Q5SVZ6 1142 aa8.05□□□□□ -1.12
SMG8-205ENST00000580798 ZCCHC2Q9C0B9 1178 aaKnown RBP8.05□□□□□ -1.12
SMG8-205ENST00000580798 KLF15Q9UIH9 416 aa8.05□□□□□ -1.12
SMG8-205ENST00000580798 HCN2Q9UL51 889 aa8.05□□□□□ -1.12
SMG8-205ENST00000580798 FIGNL1Q6PIW4 674 aa8.04□□□□□ -1.12
SMG8-205ENST00000580798 ETNK1Q9HBU6 452 aa8.04□□□□□ -1.12
SMG8-205ENST00000580798 CEP126Q9P2H0 1117 aa8.04□□□□□ -1.12
SMG8-205ENST00000580798 PCDHGC4Q9Y5F7 938 aa8.04□□□□□ -1.12
SMG8-205ENST00000580798 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
SMG8-205ENST00000580798 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
SMG8-205ENST00000580798 TLR1Q15399 786 aa8.02□□□□□ -1.13
SMG8-205ENST00000580798 TSGA10IPQ3SY00 556 aa8.02□□□□□ -1.13
SMG8-205ENST00000580798 TBC1D9Q6ZT07 1266 aa8.02□□□□□ -1.13
SMG8-205ENST00000580798 FCHSD1Q86WN1 690 aa8.02□□□□□ -1.13
SMG8-205ENST00000580798 TRIM11Q96F44 468 aa8.02□□□□□ -1.13
SMG8-205ENST00000580798 ATP4AP20648 1035 aa8.01□□□□□ -1.13
SMG8-205ENST00000580798 ADH6P28332 368 aa8.01□□□□□ -1.13
SMG8-205ENST00000580798 GATA4P43694 442 aa8.01□□□□□ -1.13
SMG8-205ENST00000580798 ATXN7O15265 892 aaPredicted RBP8□□□□□ -1.13
SMG8-205ENST00000580798 NLRP8Q86W28 1048 aa8□□□□□ -1.13
SMG8-205ENST00000580798 PLVAPQ9BX97 442 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms