RNA–Protein interactions for RNA: ENST00000578137.5

DDX42-206, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 857 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-206ENST00000578137 COL8A1P27658 744 aa8.48□□□□□ -1.05
DDX42-206ENST00000578137 CYLDQ9NQC7 956 aa8.48□□□□□ -1.05
DDX42-206ENST00000578137 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.47□□□□□ -1.05
DDX42-206ENST00000578137 GRIP2Q9C0E4 1043 aa8.47□□□□□ -1.05
DDX42-206ENST00000578137 GDF2Q9UK05 429 aaPredicted RBP8.47□□□□□ -1.05
DDX42-206ENST00000578137 A0A1W2PRU2 124 aa8.46□□□□□ -1.06
DDX42-206ENST00000578137 NBPF10Q6P3W6 841 aaKnown RBP8.46□□□□□ -1.06
DDX42-206ENST00000578137 NBPF15Q8N660 670 aa8.46□□□□□ -1.06
DDX42-206ENST00000578137 NUCKS1Q9H1E3 243 aaKnown RBP8.46□□□□□ -1.06
DDX42-206ENST00000578137 PRDM2Q13029 1718 aa8.46□□□□□ -1.06
DDX42-206ENST00000578137 AQRO60306 1485 aaKnown RBP eCLIP8.45□□□□□ -1.061e-8■■■■■ 39.5
DDX42-206ENST00000578137 TARBP1Q13395 1621 aaKnown RBP8.45□□□□□ -1.06
DDX42-206ENST00000578137 SHISA8B8ZZ34 492 aa8.45□□□□□ -1.06
DDX42-206ENST00000578137 F11P03951 625 aa8.45□□□□□ -1.06
DDX42-206ENST00000578137 ITGB7P26010 798 aa8.45□□□□□ -1.06
DDX42-206ENST00000578137 POU4F2Q12837 409 aa8.45□□□□□ -1.06
DDX42-206ENST00000578137 SKIV2LQ15477 1246 aaKnown RBP8.45□□□□□ -1.06
DDX42-206ENST00000578137 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
DDX42-206ENST00000578137 GAS2L1Q99501 681 aaPredicted RBP8.45□□□□□ -1.06
DDX42-206ENST00000578137 KIF13AQ9H1H9 1805 aa8.45□□□□□ -1.06
DDX42-206ENST00000578137 ERVK-9P63128 1117 aa8.44□□□□□ -1.06
DDX42-206ENST00000578137 FBXO31Q5XUX0 539 aaPredicted RBP8.44□□□□□ -1.06
DDX42-206ENST00000578137 TOPBP1Q92547 1522 aa8.44□□□□□ -1.06
DDX42-206ENST00000578137 MEN1O00255 615 aa8.43□□□□□ -1.06
DDX42-206ENST00000578137 PIK3R2O00459 728 aa8.43□□□□□ -1.06
DDX42-206ENST00000578137 CLN3Q13286 438 aa8.43□□□□□ -1.06
DDX42-206ENST00000578137 SLC27A3Q5K4L6 730 aa8.43□□□□□ -1.06
DDX42-206ENST00000578137 EPS8L1Q8TE68 723 aa8.43□□□□□ -1.06
DDX42-206ENST00000578137 LBRQ14739 615 aaKnown RBP8.42□□□□□ -1.06
DDX42-206ENST00000578137 SH3D19Q5HYK7 790 aa8.42□□□□□ -1.06
DDX42-206ENST00000578137 C1orf229Q6ZS94 237 aaPredicted RBP8.42□□□□□ -1.06
DDX42-206ENST00000578137 KLRG1Q96E93 195 aa8.42□□□□□ -1.06
DDX42-206ENST00000578137 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
DDX42-206ENST00000578137 KRTAP4-12Q9BQ66 201 aa8.42□□□□□ -1.06
DDX42-206ENST00000578137 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
DDX42-206ENST00000578137 THBS1P07996 1170 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 HOXB4P17483 251 aaPredicted RBP8.41□□□□□ -1.06
DDX42-206ENST00000578137 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 TAS1R3Q7RTX0 852 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 GOLGA6L1Q8N7Z2 621 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 EDARADDQ8WWZ3 215 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
DDX42-206ENST00000578137 WASLO00401 505 aaPredicted RBP8.4□□□□□ -1.06
DDX42-206ENST00000578137 CYP2U1Q7Z449 544 aa8.4□□□□□ -1.06
DDX42-206ENST00000578137 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
DDX42-206ENST00000578137 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
DDX42-206ENST00000578137 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
DDX42-206ENST00000578137 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
DDX42-206ENST00000578137 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
DDX42-206ENST00000578137 GNB5O14775 395 aa8.38□□□□□ -1.07
DDX42-206ENST00000578137 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
DDX42-206ENST00000578137 AP1G2O75843 785 aa8.38□□□□□ -1.07
DDX42-206ENST00000578137 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
DDX42-206ENST00000578137 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
DDX42-206ENST00000578137 SLCO4C1Q6ZQN7 724 aa8.38□□□□□ -1.07
DDX42-206ENST00000578137 ERCC6L2Q5T890 1561 aa8.37□□□□□ -1.07
DDX42-206ENST00000578137 USP17L8P0C7I0 530 aa8.37□□□□□ -1.07
DDX42-206ENST00000578137 SYNJ1O43426 1573 aa8.36□□□□□ -1.07
DDX42-206ENST00000578137 TRAK2O60296 914 aa8.36□□□□□ -1.07
DDX42-206ENST00000578137 ZMYM1Q5SVZ6 1142 aa8.36□□□□□ -1.07
DDX42-206ENST00000578137 CD163Q86VB7 1156 aa8.36□□□□□ -1.07
DDX42-206ENST00000578137 PROCA1Q8NCQ7 364 aaPredicted RBP8.36□□□□□ -1.07
DDX42-206ENST00000578137 NOP53Q9NZM5 478 aaKnown RBP8.36□□□□□ -1.07
DDX42-206ENST00000578137 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
DDX42-206ENST00000578137 SNAPC4Q5SXM2 1469 aa8.35□□□□□ -1.07
DDX42-206ENST00000578137 A0A1B0GTH6 734 aa8.35□□□□□ -1.07
DDX42-206ENST00000578137 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
DDX42-206ENST00000578137 CHRNA4P43681 627 aa8.35□□□□□ -1.07
DDX42-206ENST00000578137 MCCD1P59942 119 aaPredicted RBP8.35□□□□□ -1.07
DDX42-206ENST00000578137 SEMA6BQ9H3T3 888 aa8.35□□□□□ -1.07
DDX42-206ENST00000578137 ATXN7L1Q9ULK2 861 aaPredicted RBP8.35□□□□□ -1.07
DDX42-206ENST00000578137 DGKGP49619 791 aa8.33□□□□□ -1.08
DDX42-206ENST00000578137 OSBPL3Q9H4L5 887 aa8.33□□□□□ -1.08
DDX42-206ENST00000578137 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
DDX42-206ENST00000578137 HECW2Q9P2P5 1572 aa8.33□□□□□ -1.08
DDX42-206ENST00000578137 POLA1P09884 1462 aaPredicted RBP8.32□□□□□ -1.08
DDX42-206ENST00000578137 EPXP11678 715 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 ESYT1Q9BSJ8 1104 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 TRIM34Q9BYJ4 488 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 ARHGEF10LQ9HCE6 1279 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 NDFIP2Q9NV92 336 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
DDX42-206ENST00000578137 GNRH1P01148 92 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 AMPD1P23109 780 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 SCTRP47872 440 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 DOC2BQ14184 412 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 BTBD6Q96KE9 485 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 KRTAP9-9Q9BYP9 154 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 KRTAP9-4Q9BYQ2 154 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 HRH3Q9Y5N1 445 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 RAD54L2Q9Y4B4 1467 aa8.31□□□□□ -1.08
DDX42-206ENST00000578137 TOP2AP11388 1531 aaKnown RBP8.3□□□□□ -1.08
DDX42-206ENST00000578137 C2CD2LO14523 706 aa8.3□□□□□ -1.08
DDX42-206ENST00000578137 ARAFP10398 606 aa8.3□□□□□ -1.08
DDX42-206ENST00000578137 BMP4P12644 408 aa8.3□□□□□ -1.08
DDX42-206ENST00000578137 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
DDX42-206ENST00000578137 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms