RNA–Protein interactions for RNA: ENST00000578137.5

DDX42-206, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 857 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-206ENST00000578137 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
DDX42-206ENST00000578137 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
DDX42-206ENST00000578137 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
DDX42-206ENST00000578137 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
DDX42-206ENST00000578137 FOXD1Q16676 465 aa22.2■■□□□ 1.14
DDX42-206ENST00000578137 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
DDX42-206ENST00000578137 MSH5O43196 834 aa20.9■□□□□ 0.94
DDX42-206ENST00000578137 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
DDX42-206ENST00000578137 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
DDX42-206ENST00000578137 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
DDX42-206ENST00000578137 ADRA2BP18089 450 aa20.27■□□□□ 0.84
DDX42-206ENST00000578137 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
DDX42-206ENST00000578137 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
DDX42-206ENST00000578137 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
DDX42-206ENST00000578137 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
DDX42-206ENST00000578137 DCAF8L1A6NGE4 600 aa18.02■□□□□ 0.48
DDX42-206ENST00000578137 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
DDX42-206ENST00000578137 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
DDX42-206ENST00000578137 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
DDX42-206ENST00000578137 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
DDX42-206ENST00000578137 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
DDX42-206ENST00000578137 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
DDX42-206ENST00000578137 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
DDX42-206ENST00000578137 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
DDX42-206ENST00000578137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.315e-7■■□□□ 13.6
DDX42-206ENST00000578137 NPM3O75607 178 aaKnown RBP16.84■□□□□ 0.29
DDX42-206ENST00000578137 POTEHQ6S545 545 aa16.65■□□□□ 0.26
DDX42-206ENST00000578137 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
DDX42-206ENST00000578137 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
DDX42-206ENST00000578137 DSG3P32926 999 aa16.53■□□□□ 0.24
DDX42-206ENST00000578137 CAPN15O75808 1086 aa16.5■□□□□ 0.23
DDX42-206ENST00000578137 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
DDX42-206ENST00000578137 KCNA4P22459 653 aa16.17■□□□□ 0.18
DDX42-206ENST00000578137 APLP2Q06481 763 aa16.15■□□□□ 0.18
DDX42-206ENST00000578137 ABCB7O75027 752 aa16.13■□□□□ 0.17
DDX42-206ENST00000578137 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
DDX42-206ENST00000578137 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
DDX42-206ENST00000578137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
DDX42-206ENST00000578137 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
DDX42-206ENST00000578137 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
DDX42-206ENST00000578137 RBM42Q9BTD8 480 aaKnown RBP15.73■□□□□ 0.11
DDX42-206ENST00000578137 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
DDX42-206ENST00000578137 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
DDX42-206ENST00000578137 POLA2Q14181 598 aa15.54■□□□□ 0.08
DDX42-206ENST00000578137 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
DDX42-206ENST00000578137 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
DDX42-206ENST00000578137 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
DDX42-206ENST00000578137 FOXD4L1Q9NU39 408 aa15.26■□□□□ 0.03
DDX42-206ENST00000578137 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
DDX42-206ENST00000578137 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
DDX42-206ENST00000578137 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
DDX42-206ENST00000578137 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
DDX42-206ENST00000578137 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
DDX42-206ENST00000578137 PITPNM1O00562 1244 aa15.03■□□□□ -0
DDX42-206ENST00000578137 HAX1O00165 279 aa15.02■□□□□ -0
DDX42-206ENST00000578137 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
DDX42-206ENST00000578137 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
DDX42-206ENST00000578137 ZBTB22O15209 634 aa14.86□□□□□ -0.03
DDX42-206ENST00000578137 EVX2Q03828 476 aa14.86□□□□□ -0.03
DDX42-206ENST00000578137 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
DDX42-206ENST00000578137 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
DDX42-206ENST00000578137 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
DDX42-206ENST00000578137 FBLN2P98095 1184 aa14.7□□□□□ -0.06
DDX42-206ENST00000578137 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
DDX42-206ENST00000578137 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
DDX42-206ENST00000578137 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
DDX42-206ENST00000578137 SSUH2Q9Y2M2 353 aa14.54□□□□□ -0.08
DDX42-206ENST00000578137 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
DDX42-206ENST00000578137 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
DDX42-206ENST00000578137 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
DDX42-206ENST00000578137 GABBR2O75899 941 aa14.45□□□□□ -0.1
DDX42-206ENST00000578137 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
DDX42-206ENST00000578137 LHX8Q68G74 356 aa14.37□□□□□ -0.11
DDX42-206ENST00000578137 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
DDX42-206ENST00000578137 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDX42-206ENST00000578137 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
DDX42-206ENST00000578137 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
DDX42-206ENST00000578137 CLCN6P51797 869 aa14.1□□□□□ -0.15
DDX42-206ENST00000578137 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
DDX42-206ENST00000578137 PLSCR2Q9NRY7 297 aa13.95□□□□□ -0.18
DDX42-206ENST00000578137 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
DDX42-206ENST00000578137 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
DDX42-206ENST00000578137 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
DDX42-206ENST00000578137 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
DDX42-206ENST00000578137 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
DDX42-206ENST00000578137 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
DDX42-206ENST00000578137 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
DDX42-206ENST00000578137 OTUD5Q96G74 571 aa13.73□□□□□ -0.21
DDX42-206ENST00000578137 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
DDX42-206ENST00000578137 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
DDX42-206ENST00000578137 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
DDX42-206ENST00000578137 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
DDX42-206ENST00000578137 POTEMA6NI47 508 aa13.59□□□□□ -0.23
DDX42-206ENST00000578137 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX42-206ENST00000578137 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
DDX42-206ENST00000578137 PELP1Q8IZL8 1130 aaKnown RBP13.56□□□□□ -0.24
DDX42-206ENST00000578137 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
DDX42-206ENST00000578137 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
DDX42-206ENST00000578137 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
DDX42-206ENST00000578137 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms