RNA–Protein interactions for RNA: ENST00000569395.5

SCAPER-222, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 558 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-222	ENST00000569395	ESYT1	Q9BSJ8	1104 aa		7.58	□□□□□ -1.2
SCAPER-222	ENST00000569395	ARID3C	A6NKF2	412 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	FIGNL2	A6NMB9	653 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	IL2RA	P01589	272 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	VEGFB	P49765	207 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	GTF2I	P78347	998 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	TRIM50	Q86XT4	487 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	RNF217	Q8TC41	542 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	CNKSR1	Q969H4	720 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	MKRN1	Q9UHC7	482 aa	Known RBP	7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	PCDHGA11	Q9Y5H2	935 aa		7.57	□□□□□ -1.2
SCAPER-222	ENST00000569395	LMOD1	P29536	600 aa	Predicted RBP	7.56	□□□□□ -1.2
SCAPER-222	ENST00000569395	SCNN1D	P51172	638 aa		7.56	□□□□□ -1.2
SCAPER-222	ENST00000569395	XAGE2	Q96GT9	111 aa		7.56	□□□□□ -1.2
SCAPER-222	ENST00000569395	ETNK1	Q9HBU6	452 aa		7.56	□□□□□ -1.2
SCAPER-222	ENST00000569395	TIMELESS	Q9UNS1	1208 aa		7.56	□□□□□ -1.2
SCAPER-222	ENST00000569395	WASL	O00401	505 aa	Predicted RBP	7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	STAU1	O95793	577 aa	Known RBP	7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	ATP1A2	P50993	1020 aa		7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	GDF10	P55107	478 aa		7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	PSME1	Q06323	249 aa		7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	CFAP70	Q5T0N1	1121 aa		7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	LYSMD3	Q7Z3D4	306 aa		7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	HRH3	Q9Y5N1	445 aa		7.55	□□□□□ -1.2
SCAPER-222	ENST00000569395	IGHA1	P01876	353 aa		7.54	□□□□□ -1.2
SCAPER-222	ENST00000569395	INHA	P05111	366 aa		7.54	□□□□□ -1.2
SCAPER-222	ENST00000569395	SLC27A3	Q5K4L6	730 aa		7.54	□□□□□ -1.2
SCAPER-222	ENST00000569395	CCDC97	Q96F63	343 aa	Predicted RBP	7.54	□□□□□ -1.2
SCAPER-222	ENST00000569395	TMEM229A	B2RXF0	380 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	CLDN10	P78369	228 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	CENPC	Q03188	943 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	GPAT2	Q6NUI2	795 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	OGFOD1	Q8N543	542 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	GRIP2	Q9C0E4	1043 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	DNAAF2	Q9NVR5	837 aa	Known RBP	7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	SERPINA10	Q9UK55	444 aa		7.53	□□□□□ -1.2
SCAPER-222	ENST00000569395	TLR1	Q15399	786 aa		7.52	□□□□□ -1.21
SCAPER-222	ENST00000569395	KANK4	Q5T7N3	995 aa	Predicted RBP	7.52	□□□□□ -1.21
SCAPER-222	ENST00000569395	PRICKLE2	Q7Z3G6	844 aa		7.52	□□□□□ -1.21
SCAPER-222	ENST00000569395	LARGE2	Q8N3Y3	721 aa		7.52	□□□□□ -1.21
SCAPER-222	ENST00000569395	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.52	□□□□□ -1.21
SCAPER-222	ENST00000569395	KIAA1024	Q9UPX6	916 aa		7.52	□□□□□ -1.21
SCAPER-222	ENST00000569395	ZBTB7B	O15156	539 aa	Predicted RBP	7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	RASA1	P20936	1047 aa		7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	RFX1	P22670	979 aa		7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	PTS	Q03393	145 aa		7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	CCDC102B	Q68D86	513 aa		7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	TPCN2	Q8NHX9	752 aa		7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	VRTN	Q9H8Y1	702 aa		7.51	□□□□□ -1.21
SCAPER-222	ENST00000569395	SPATA31C2	B4DYI2	1134 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	RNF225	M0QZC1	329 aa	Predicted RBP	7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	BACH1	O14867	736 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	LARP1	Q6PKG0	1096 aa	Known RBP	7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	SIX5	Q8N196	739 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	ZNF594	Q96JF6	807 aa	Predicted RBP	7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	SLC4A9	Q96Q91	983 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	C1orf115	Q9H7X2	142 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	ZNF358	Q9NW07	568 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	SERTAD1	Q9UHV2	236 aa		7.5	□□□□□ -1.21
SCAPER-222	ENST00000569395	SLC35F4	A4IF30	521 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	FAM196B	A6NMK8	535 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	RHOQ	P17081	205 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	GTF2E1	P29083	439 aa	Predicted RBP	7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	SMTN	P53814	917 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	POU4F2	Q12837	409 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	CRTC2	Q53ET0	693 aa	Predicted RBP	7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	WDR44	Q5JSH3	913 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	CCDC82	Q8N4S0	544 aa		7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	RBM19	Q9Y4C8	960 aa	Known RBP	7.49	□□□□□ -1.21
SCAPER-222	ENST00000569395	SENP3-EIF4A1	A0A087X0R7	540 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	PTK7	Q13308	1070 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	MTFR1	Q15390	333 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	GNAS	Q5JWF2	1037 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	TMEM214	Q6NUQ4	689 aa	Known RBP	7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	NBPF10	Q6P3W6	841 aa	Known RBP	7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	TAS1R3	Q7RTX0	852 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	NBPF15	Q8N660	670 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	CCDC155	Q8N6L0	562 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395	RHBDD1	Q8TEB9	315 aa		7.48	□□□□□ -1.21
SCAPER-222	ENST00000569395		A6NJY4	79 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L15	C9J2P7	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L10	C9JJH3	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L13	C9JLJ4	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L12	C9JPN9	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L11	C9JVI0	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L21	D6R901	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L18	D6R9N7	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L22	D6RA61	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L17	D6RBQ6	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L19	D6RCP7	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L20	D6RJB6	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	PPFIA3	O75145	1194 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	DKK1	O94907	266 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	USP17L24	Q0WX57	530 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395	DCAF1	Q9Y4B6	1507 aa		7.47	□□□□□ -1.21
SCAPER-222	ENST00000569395		M0R2N6	131 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms