RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 PIGBQ92521 554 aa14.83□□□□□ -0.04
LINC01228-201ENST00000567966 SPG7Q9UQ90 795 aa14.83□□□□□ -0.04
LINC01228-201ENST00000567966 DIAPH1O60610 1272 aaKnown RBP14.82□□□□□ -0.04
LINC01228-201ENST00000567966 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
LINC01228-201ENST00000567966 PHKG2P15735 406 aa14.81□□□□□ -0.04
LINC01228-201ENST00000567966 IL13P35225 146 aa14.81□□□□□ -0.04
LINC01228-201ENST00000567966 SMIM5Q71RC9 77 aa14.81□□□□□ -0.04
LINC01228-201ENST00000567966 ANP32CO43423 234 aa14.8□□□□□ -0.04
LINC01228-201ENST00000567966 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
LINC01228-201ENST00000567966 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
LINC01228-201ENST00000567966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC01228-201ENST00000567966 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
LINC01228-201ENST00000567966 IGSF1Q8N6C5 1336 aa14.8□□□□□ -0.04
LINC01228-201ENST00000567966 MYBBP1AQ9BQG0 1328 aaKnown RBP14.8□□□□□ -0.04
LINC01228-201ENST00000567966 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
LINC01228-201ENST00000567966 MSL1Q68DK7 614 aa14.79□□□□□ -0.04
LINC01228-201ENST00000567966 IFNL2Q8IZJ0 200 aa14.79□□□□□ -0.04
LINC01228-201ENST00000567966 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
LINC01228-201ENST00000567966 ASAP1Q9ULH1 1129 aa14.79□□□□□ -0.04
LINC01228-201ENST00000567966 PLEKHG2Q9H7P9 1386 aa14.78□□□□□ -0.04
LINC01228-201ENST00000567966 POLD1P28340 1107 aa14.78□□□□□ -0.04
LINC01228-201ENST00000567966 SMARCC1Q92922 1105 aaPredicted RBP14.78□□□□□ -0.04
LINC01228-201ENST00000567966 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
LINC01228-201ENST00000567966 NLGN2Q8NFZ4 835 aa14.77□□□□□ -0.05
LINC01228-201ENST00000567966 UBR3Q6ZT12 1888 aa14.77□□□□□ -0.05
LINC01228-201ENST00000567966 LINC00116Q8NCU8 138 aa14.76□□□□□ -0.05
LINC01228-201ENST00000567966 ATG3Q9NT62 314 aa14.76□□□□□ -0.05
LINC01228-201ENST00000567966 TMOD3Q9NYL9 352 aa14.76□□□□□ -0.05
LINC01228-201ENST00000567966 LOC102724428A0A0B4J2F2 783 aa14.75□□□□□ -0.05
LINC01228-201ENST00000567966 SIK1P57059 783 aa14.75□□□□□ -0.05
LINC01228-201ENST00000567966 ITPK1Q13572 414 aa14.75□□□□□ -0.05
LINC01228-201ENST00000567966 PHF14O94880 888 aa14.74□□□□□ -0.05
LINC01228-201ENST00000567966 AK7Q96M32 723 aa14.74□□□□□ -0.05
LINC01228-201ENST00000567966 FCHSD2O94868 740 aa14.73□□□□□ -0.05
LINC01228-201ENST00000567966 AMOTQ4VCS5 1084 aa14.73□□□□□ -0.05
LINC01228-201ENST00000567966 PLEKHO1Q53GL0 409 aaPredicted RBP14.73□□□□□ -0.05
LINC01228-201ENST00000567966 SULT6B1Q6IMI4 303 aa14.73□□□□□ -0.05
LINC01228-201ENST00000567966 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
LINC01228-201ENST00000567966 PNNQ9H307 717 aaKnown RBP14.73□□□□□ -0.05
LINC01228-201ENST00000567966 KDM6AO15550 1401 aaPredicted RBP14.73□□□□□ -0.05
LINC01228-201ENST00000567966 KDRP35968 1356 aa14.73□□□□□ -0.05
LINC01228-201ENST00000567966 CHD4Q14839 1912 aa14.72□□□□□ -0.05
LINC01228-201ENST00000567966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.72□□□□□ -0.05
LINC01228-201ENST00000567966 GPR162Q16538 588 aa14.72□□□□□ -0.05
LINC01228-201ENST00000567966 SLC4A9Q96Q91 983 aa14.72□□□□□ -0.05
LINC01228-201ENST00000567966 U2SURPO15042 1029 aaKnown RBP14.71□□□□□ -0.05
LINC01228-201ENST00000567966 ATP6V1AP38606 617 aa14.71□□□□□ -0.05
LINC01228-201ENST00000567966 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
LINC01228-201ENST00000567966 FLAD1Q8NFF5 587 aa14.71□□□□□ -0.05
LINC01228-201ENST00000567966 ERVV-2B6SEH9 535 aa14.7□□□□□ -0.06
LINC01228-201ENST00000567966 U2AF1L5P0DN76 240 aaPredicted RBP14.7□□□□□ -0.06
LINC01228-201ENST00000567966 U2AF1Q01081 240 aaKnown RBP eCLIP14.7□□□□□ -0.06
LINC01228-201ENST00000567966 DCAF5Q96JK2 942 aa14.7□□□□□ -0.06
LINC01228-201ENST00000567966 GNPATO15228 680 aa14.69□□□□□ -0.06
LINC01228-201ENST00000567966 ZNF784Q8NCA9 323 aaPredicted RBP14.69□□□□□ -0.06
LINC01228-201ENST00000567966 RBM42Q9BTD8 480 aaKnown RBP14.69□□□□□ -0.06
LINC01228-201ENST00000567966 COL3A1P02461 1466 aaPredicted RBP14.69□□□□□ -0.06
LINC01228-201ENST00000567966 HSP90AB1P08238 724 aaKnown RBP14.68□□□□□ -0.06
LINC01228-201ENST00000567966 YBX3P16989 372 aaKnown RBP eCLIP14.68□□□□□ -0.06
LINC01228-201ENST00000567966 SSFA2P28290 1259 aa14.68□□□□□ -0.06
LINC01228-201ENST00000567966 CABP4P57796 275 aa14.68□□□□□ -0.06
LINC01228-201ENST00000567966 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
LINC01228-201ENST00000567966 ZNF831Q5JPB2 1677 aa14.68□□□□□ -0.06
LINC01228-201ENST00000567966 ABCB7O75027 752 aa14.67□□□□□ -0.06
LINC01228-201ENST00000567966 HMOX1P09601 288 aa14.67□□□□□ -0.06
LINC01228-201ENST00000567966 HMGB2P26583 209 aaKnown RBP14.67□□□□□ -0.06
LINC01228-201ENST00000567966 POLA2Q14181 598 aa14.67□□□□□ -0.06
LINC01228-201ENST00000567966 C1orf141Q5JVX7 400 aa14.67□□□□□ -0.06
LINC01228-201ENST00000567966 SCN11AQ9UI33 1791 aa14.67□□□□□ -0.06
LINC01228-201ENST00000567966 UTRNP46939 3433 aa14.67□□□□□ -0.06
LINC01228-201ENST00000567966 MIER1Q8N108 512 aa14.66□□□□□ -0.06
LINC01228-201ENST00000567966 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
LINC01228-201ENST00000567966 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
LINC01228-201ENST00000567966 PTCD1O75127 700 aaKnown RBP14.65□□□□□ -0.06
LINC01228-201ENST00000567966 NEFMP07197 916 aa14.65□□□□□ -0.06
LINC01228-201ENST00000567966 CENPBP07199 599 aaPredicted RBP14.65□□□□□ -0.06
LINC01228-201ENST00000567966 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
LINC01228-201ENST00000567966 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
LINC01228-201ENST00000567966 CD2APQ9Y5K6 639 aa14.65□□□□□ -0.06
LINC01228-201ENST00000567966 MYH14Q7Z406 1995 aaKnown RBP14.65□□□□□ -0.06
LINC01228-201ENST00000567966 LGR6Q9HBX8 967 aa14.64□□□□□ -0.07
LINC01228-201ENST00000567966 TJP1Q07157 1748 aa14.63□□□□□ -0.07
LINC01228-201ENST00000567966 CCER2I3L3R5 266 aa14.63□□□□□ -0.07
LINC01228-201ENST00000567966 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
LINC01228-201ENST00000567966 GAS2L2Q8NHY3 880 aa14.63□□□□□ -0.07
LINC01228-201ENST00000567966 PNISRQ8TF01 805 aaKnown RBP14.63□□□□□ -0.07
LINC01228-201ENST00000567966 WWC3Q9ULE0 1092 aa14.63□□□□□ -0.07
LINC01228-201ENST00000567966 RTCBQ9Y3I0 505 aaKnown RBP14.63□□□□□ -0.07
LINC01228-201ENST00000567966 GOLGB1Q14789 3259 aaKnown RBP14.63□□□□□ -0.07
LINC01228-201ENST00000567966 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
LINC01228-201ENST00000567966 MTHFSDQ2M296 383 aaKnown RBP14.62□□□□□ -0.07
LINC01228-201ENST00000567966 RC3H1Q5TC82 1133 aaKnown RBP14.62□□□□□ -0.07
LINC01228-201ENST00000567966 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
LINC01228-201ENST00000567966 MRS2Q9HD23 443 aa14.62□□□□□ -0.07
LINC01228-201ENST00000567966 CNTNAP4Q9C0A0 1308 aa14.62□□□□□ -0.07
LINC01228-201ENST00000567966 C4AP0C0L4 1744 aa14.61□□□□□ -0.07
LINC01228-201ENST00000567966 RPS6KA4O75676 772 aa14.61□□□□□ -0.07
LINC01228-201ENST00000567966 MMP10P09238 476 aa14.61□□□□□ -0.07
LINC01228-201ENST00000567966 DSG3P32926 999 aa14.61□□□□□ -0.07
LINC01228-201ENST00000567966 TRAPPC3LQ5T215 181 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms