RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CCDC110Q8TBZ0 833 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 YEATS4O95619 227 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 RAB34Q9BZG1 259 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 RAPGEF2Q9Y4G8 1499 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 ATP2B1P20020 1258 aa5.9□□□□□ -1.47
SMG1-211ENST00000565324 GOLIM4O00461 696 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 TTC39AQ5SRH9 613 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 FBF1Q8TES7 1133 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 CETN1Q12798 172 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 FAM114A2Q9NRY5 505 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 FYCO1Q9BQS8 1478 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 A0A1B0GUA9 196 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 HOMER2Q9NSB8 354 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 GTF2F1P35269 517 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMG1-211ENST00000565324 CCDC50Q8IVM0 306 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 PPP4R3BQ5MIZ7 849 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 RASAL2Q9UJF2 1139 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 ANAPC4Q9UJX5 808 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 SYCE3A1L190 88 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 CTNNA2P26232 953 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 HS1BP3Q53T59 392 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 PPP1R14CQ8TAE6 165 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 LRRC45Q96CN5 670 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 LUC7L2Q9Y383 392 aaKnown RBP5.89□□□□□ -1.47
SMG1-211ENST00000565324 CCDC160A6NGH7 325 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 KIF4AO95239 1232 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 TTC12Q9H892 705 aaPredicted RBP5.89□□□□□ -1.47
SMG1-211ENST00000565324 SH2B1Q9NRF2 756 aaPredicted RBP5.89□□□□□ -1.47
SMG1-211ENST00000565324 SNW1Q13573 536 aaKnown RBP5.89□□□□□ -1.47
SMG1-211ENST00000565324 MAP4K4O95819 1239 aaPredicted RBP5.89□□□□□ -1.47
SMG1-211ENST00000565324 MAP3K9P80192 1104 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 RAPGEF4Q8WZA2 1011 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 STIM2Q9P246 746 aa5.89□□□□□ -1.47
SMG1-211ENST00000565324 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 SUPT6HQ7KZ85 1726 aaKnown RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 KANK3Q6NY19 840 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 SMC6Q96SB8 1091 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 FAM184BQ9ULE4 1060 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 MYOM3Q5VTT5 1437 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 KIF21BO75037 1637 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 PABPN1LA6NDY0 278 aaKnown RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 PRPHP41219 470 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 NUP88Q99567 741 aaPredicted RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 PAIP2Q9BPZ3 127 aaKnown RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 TRAK1Q9UPV9 953 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 TOP2AP11388 1531 aaKnown RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 PIP4K2BP78356 416 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 B4GALNT4Q76KP1 1039 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 MAATS1Q7Z4T9 603 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 IFT74Q96LB3 600 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 IQCGQ9H095 443 aaKnown RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 JADE2Q9NQC1 790 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 TNIP1Q15025 636 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 DHX37Q8IY37 1157 aaKnown RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 RAB3IL1Q8TBN0 382 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 RAI14Q9P0K7 980 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 MATR3P43243 847 aaKnown RBP eCLIP5.88□□□□□ -1.47
SMG1-211ENST00000565324 STX1AQ16623 288 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 KIAA0753Q2KHM9 967 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 SAMD1Q6SPF0 538 aaPredicted RBP5.88□□□□□ -1.47
SMG1-211ENST00000565324 CHD1LQ86WJ1 897 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 A0A1W2PRG0 241 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 SH2D4BQ5SQS7 431 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 JAKMIP2Q96AA8 810 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 ZHX3Q9H4I2 956 aa5.88□□□□□ -1.47
SMG1-211ENST00000565324 C16orf45Q96MC5 204 aaPredicted RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 PDRG1Q9NUG6 133 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 SSX2IPQ9Y2D8 614 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 U3KPZ7 1027 aaPredicted RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 EBAG9O00559 213 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 AMPD3Q01432 767 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 MAP7D1Q3KQU3 841 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 UBAC1Q9BSL1 405 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 GBP6Q6ZN66 633 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 CCDC121Q6ZUS5 278 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 PRDM10Q9NQV6 1147 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 UVSSAQ2YD98 709 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 TDRD12Q587J7 1177 aaKnown RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 PDZRN3Q9UPQ7 1066 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 ZHX1Q9UKY1 873 aaPredicted RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 CTAGE9A4FU28 777 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 MSH5O43196 834 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 CEP128Q6ZU80 1094 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 OTUD6BQ8N6M0 293 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 ZNF76P36508 570 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 RNF168Q8IYW5 571 aaPredicted RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 MIPOL1Q8TD10 442 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 SELENOOQ9BVL4 669 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 SARNPP82979 210 aaKnown RBP5.87□□□□□ -1.47
SMG1-211ENST00000565324 PIBF1Q8WXW3 757 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 NECTIN2Q92692 538 aa5.87□□□□□ -1.47
SMG1-211ENST00000565324 A0A1B0GUL7 405 aa5.86□□□□□ -1.47
SMG1-211ENST00000565324 CEP135Q66GS9 1140 aa5.86□□□□□ -1.47
SMG1-211ENST00000565324 CCDC88BA6NC98 1476 aa5.86□□□□□ -1.47
SMG1-211ENST00000565324 GAS2L2Q8NHY3 880 aa5.86□□□□□ -1.47
SMG1-211ENST00000565324 CTAGE1Q96RT6 745 aa5.86□□□□□ -1.47
SMG1-211ENST00000565324 SEC63Q9UGP8 760 aaKnown RBP5.86□□□□□ -1.47
SMG1-211ENST00000565324 ATP2A1O14983 1001 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms