RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
AP4E1-204ENST00000561004 ATXN7L1Q9ULK2 861 aaPredicted RBP8.76□□□□□ -1.01
AP4E1-204ENST00000561004 ABCC9O60706 1549 aa8.75□□□□□ -1.01
AP4E1-204ENST00000561004 WASLO00401 505 aaPredicted RBP8.75□□□□□ -1.01
AP4E1-204ENST00000561004 EPXP11678 715 aa8.75□□□□□ -1.01
AP4E1-204ENST00000561004 SPDYE3A6NKU9 549 aa8.74□□□□□ -1.01
AP4E1-204ENST00000561004 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
AP4E1-204ENST00000561004 RTL5Q5HYW3 569 aaPredicted RBP8.74□□□□□ -1.01
AP4E1-204ENST00000561004 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
AP4E1-204ENST00000561004 PGBD3Q8N328 593 aa8.74□□□□□ -1.01
AP4E1-204ENST00000561004 NKAPLQ5M9Q1 402 aa8.73□□□□□ -1.01
AP4E1-204ENST00000561004 ARAFP10398 606 aa8.72□□□□□ -1.01
AP4E1-204ENST00000561004 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
AP4E1-204ENST00000561004 LRP8Q14114 963 aa8.72□□□□□ -1.01
AP4E1-204ENST00000561004 FOXD4L6Q3SYB3 417 aaPredicted RBP8.72□□□□□ -1.01
AP4E1-204ENST00000561004 EFHC2Q5JST6 749 aa8.72□□□□□ -1.01
AP4E1-204ENST00000561004 FOXD4L3Q6VB84 417 aaPredicted RBP8.72□□□□□ -1.01
AP4E1-204ENST00000561004 A0A1B0GTH6 734 aa8.71□□□□□ -1.02
AP4E1-204ENST00000561004 COBLO75128 1261 aa8.71□□□□□ -1.02
AP4E1-204ENST00000561004 CLN3Q13286 438 aa8.71□□□□□ -1.02
AP4E1-204ENST00000561004 RNF135Q8IUD6 432 aa8.71□□□□□ -1.02
AP4E1-204ENST00000561004 PARP9Q8IXQ6 854 aa8.71□□□□□ -1.02
AP4E1-204ENST00000561004 DYRK3O43781 588 aa8.7□□□□□ -1.02
AP4E1-204ENST00000561004 CYP2U1Q7Z449 544 aa8.7□□□□□ -1.02
AP4E1-204ENST00000561004 AK7Q96M32 723 aa8.7□□□□□ -1.02
AP4E1-204ENST00000561004 OCSTAMPQ9BR26 566 aa8.7□□□□□ -1.02
AP4E1-204ENST00000561004 APBA3O96018 575 aa8.69□□□□□ -1.02
AP4E1-204ENST00000561004 FGFR3P22607 806 aa8.69□□□□□ -1.02
AP4E1-204ENST00000561004 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
AP4E1-204ENST00000561004 TXKP42681 527 aa8.69□□□□□ -1.02
AP4E1-204ENST00000561004 RSPH6AQ9H0K4 717 aa8.69□□□□□ -1.02
AP4E1-204ENST00000561004 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
AP4E1-204ENST00000561004 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
AP4E1-204ENST00000561004 PRRT3Q5FWE3 981 aa8.68□□□□□ -1.02
AP4E1-204ENST00000561004 CHSY3Q70JA7 882 aa8.68□□□□□ -1.02
AP4E1-204ENST00000561004 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
AP4E1-204ENST00000561004 NR6A1Q15406 480 aa8.67□□□□□ -1.02
AP4E1-204ENST00000561004 PRSS36Q5K4E3 855 aa8.67□□□□□ -1.02
AP4E1-204ENST00000561004 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
AP4E1-204ENST00000561004 GPAMQ9HCL2 828 aa8.67□□□□□ -1.02
AP4E1-204ENST00000561004 NACC1Q96RE7 527 aa8.66□□□□□ -1.02
AP4E1-204ENST00000561004 PLVAPQ9BX97 442 aa8.66□□□□□ -1.02
AP4E1-204ENST00000561004 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
AP4E1-204ENST00000561004 MYO15BQ96JP2 1530 aa8.65□□□□□ -1.02
AP4E1-204ENST00000561004 PAX4O43316 350 aa8.65□□□□□ -1.02
AP4E1-204ENST00000561004 RNF20Q5VTR2 975 aa8.65□□□□□ -1.02
AP4E1-204ENST00000561004 FIGNL1Q6PIW4 674 aa8.65□□□□□ -1.02
AP4E1-204ENST00000561004 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 C2CD2LO14523 706 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 TRIM66O15016 1216 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 ADH6P28332 368 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 ERVK-9P63128 1117 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 SLC24A3Q9HC58 644 aa8.64□□□□□ -1.03
AP4E1-204ENST00000561004 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
AP4E1-204ENST00000561004 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
AP4E1-204ENST00000561004 THBS1P07996 1170 aa8.63□□□□□ -1.03
AP4E1-204ENST00000561004 NACADO15069 1562 aa8.63□□□□□ -1.03
AP4E1-204ENST00000561004 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
AP4E1-204ENST00000561004 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
AP4E1-204ENST00000561004 ABHD17AQ96GS6 310 aa8.62□□□□□ -1.03
AP4E1-204ENST00000561004 CTBSQ01459 385 aa8.61□□□□□ -1.03
AP4E1-204ENST00000561004 HYAL3O43820 417 aaPredicted RBP8.6□□□□□ -1.03
AP4E1-204ENST00000561004 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
AP4E1-204ENST00000561004 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
AP4E1-204ENST00000561004 KRTAP4-7Q9BYR0 210 aa8.6□□□□□ -1.03
AP4E1-204ENST00000561004 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
AP4E1-204ENST00000561004 MCTP1Q6DN14 999 aa8.59□□□□□ -1.03
AP4E1-204ENST00000561004 ZNF592Q92610 1267 aa8.59□□□□□ -1.03
AP4E1-204ENST00000561004 TRIM11Q96F44 468 aa8.59□□□□□ -1.03
AP4E1-204ENST00000561004 ZSCAN10Q96SZ4 725 aaPredicted RBP8.59□□□□□ -1.03
AP4E1-204ENST00000561004 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
AP4E1-204ENST00000561004 BNIP3LO60238 219 aa8.58□□□□□ -1.04
AP4E1-204ENST00000561004 ESYT1Q9BSJ8 1104 aa8.58□□□□□ -1.04
AP4E1-204ENST00000561004 RUBCNLQ9H714 662 aa8.58□□□□□ -1.04
AP4E1-204ENST00000561004 GNRH1P01148 92 aa8.57□□□□□ -1.04
AP4E1-204ENST00000561004 PDE4DQ08499 809 aa8.57□□□□□ -1.04
AP4E1-204ENST00000561004 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
AP4E1-204ENST00000561004 SCRIBQ14160 1630 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 ALAS2P22557 587 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 PHKA2P46019 1235 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 MCCD1P59942 119 aaPredicted RBP8.56□□□□□ -1.04
AP4E1-204ENST00000561004 CENPCQ03188 943 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 FAM182BQ5T319 152 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 LCE1DQ5T752 114 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 TMEM214Q6NUQ4 689 aaKnown RBP8.56□□□□□ -1.04
AP4E1-204ENST00000561004 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 CRISPLD1Q9H336 500 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 PCDHGC4Q9Y5F7 938 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 RB1CC1Q8TDY2 1594 aa8.56□□□□□ -1.04
AP4E1-204ENST00000561004 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
AP4E1-204ENST00000561004 MSX1P28360 303 aa8.55□□□□□ -1.04
AP4E1-204ENST00000561004 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
AP4E1-204ENST00000561004 TRIM28Q13263 835 aaKnown RBP8.53□□□□□ -1.04
AP4E1-204ENST00000561004 NLRP8Q86W28 1048 aa8.53□□□□□ -1.04
AP4E1-204ENST00000561004 COL17A1Q9UMD9 1497 aaPredicted RBP8.52□□□□□ -1.05
AP4E1-204ENST00000561004 TRAK2O60296 914 aa8.52□□□□□ -1.05
AP4E1-204ENST00000561004 ELNP15502 786 aa8.52□□□□□ -1.05
AP4E1-204ENST00000561004 PCDHB9Q9Y5E1 797 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms