RNA–Protein interactions for RNA: ENST00000561004.1

AP4E1-204, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 3

Gene AP4E1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-204ENST00000561004 AEBP2Q6ZN18 517 aaPredicted RBP29.49■■■□□ 2.31
AP4E1-204ENST00000561004 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
AP4E1-204ENST00000561004 SENP3Q9H4L4 574 aaPredicted RBP25.55■■□□□ 1.68
AP4E1-204ENST00000561004 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
AP4E1-204ENST00000561004 FOXD1Q16676 465 aa23.71■■□□□ 1.39
AP4E1-204ENST00000561004 POTEDQ86YR6 584 aa23.13■■□□□ 1.29
AP4E1-204ENST00000561004 MSH5O43196 834 aa22.7■■□□□ 1.22
AP4E1-204ENST00000561004 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
AP4E1-204ENST00000561004 PLPPR3Q6T4P5 718 aa21.78■■□□□ 1.08
AP4E1-204ENST00000561004 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
AP4E1-204ENST00000561004 ADRA2BP18089 450 aa21.48■■□□□ 1.03
AP4E1-204ENST00000561004 DMRT2Q9Y5R5 561 aa20.08■□□□□ 0.81
AP4E1-204ENST00000561004 SCAF1Q9H7N4 1312 aaKnown RBP20.01■□□□□ 0.79
AP4E1-204ENST00000561004 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
AP4E1-204ENST00000561004 CACNB1Q02641 598 aaPredicted RBP19.84■□□□□ 0.77
AP4E1-204ENST00000561004 DCAF8L1A6NGE4 600 aa19.32■□□□□ 0.68
AP4E1-204ENST00000561004 RNF39Q9H2S5 420 aa19.17■□□□□ 0.66
AP4E1-204ENST00000561004 HOXD11P31277 338 aaPredicted RBP19.07■□□□□ 0.64
AP4E1-204ENST00000561004 C1QBPQ07021 282 aaKnown RBP18.98■□□□□ 0.63
AP4E1-204ENST00000561004 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
AP4E1-204ENST00000561004 CNKSR2Q8WXI2 1034 aa18.8■□□□□ 0.6
AP4E1-204ENST00000561004 RNF216Q9NWF9 866 aaPredicted RBP18.8■□□□□ 0.6
AP4E1-204ENST00000561004 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
AP4E1-204ENST00000561004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
AP4E1-204ENST00000561004 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
AP4E1-204ENST00000561004 POTEHQ6S545 545 aa18.06■□□□□ 0.48
AP4E1-204ENST00000561004 CAPN15O75808 1086 aa17.7■□□□□ 0.42
AP4E1-204ENST00000561004 DSG3P32926 999 aa17.7■□□□□ 0.42
AP4E1-204ENST00000561004 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
AP4E1-204ENST00000561004 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
AP4E1-204ENST00000561004 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
AP4E1-204ENST00000561004 APLP2Q06481 763 aa17.44■□□□□ 0.38
AP4E1-204ENST00000561004 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
AP4E1-204ENST00000561004 TRHP20396 242 aaPredicted RBP17.21■□□□□ 0.35
AP4E1-204ENST00000561004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.2■□□□□ 0.34
AP4E1-204ENST00000561004 HNRNPUL2Q1KMD3 747 aaKnown RBP17.2■□□□□ 0.34
AP4E1-204ENST00000561004 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
AP4E1-204ENST00000561004 ABCB7O75027 752 aa17.1■□□□□ 0.33
AP4E1-204ENST00000561004 SAMD1Q6SPF0 538 aaPredicted RBP16.99■□□□□ 0.31
AP4E1-204ENST00000561004 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
AP4E1-204ENST00000561004 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
AP4E1-204ENST00000561004 KCNA4P22459 653 aa16.63■□□□□ 0.25
AP4E1-204ENST00000561004 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
AP4E1-204ENST00000561004 POLA2Q14181 598 aa16.59■□□□□ 0.25
AP4E1-204ENST00000561004 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
AP4E1-204ENST00000561004 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
AP4E1-204ENST00000561004 ZBTB12Q9Y330 459 aaPredicted RBP16.41■□□□□ 0.22
AP4E1-204ENST00000561004 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
AP4E1-204ENST00000561004 HAX1O00165 279 aa16.24■□□□□ 0.19
AP4E1-204ENST00000561004 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
AP4E1-204ENST00000561004 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
AP4E1-204ENST00000561004 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
AP4E1-204ENST00000561004 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
AP4E1-204ENST00000561004 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
AP4E1-204ENST00000561004 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
AP4E1-204ENST00000561004 SPDYE2BA6NHP3 402 aa15.75■□□□□ 0.11
AP4E1-204ENST00000561004 SPDYE6P0CI01 402 aa15.75■□□□□ 0.11
AP4E1-204ENST00000561004 EVX2Q03828 476 aa15.75■□□□□ 0.11
AP4E1-204ENST00000561004 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
AP4E1-204ENST00000561004 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
AP4E1-204ENST00000561004 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
AP4E1-204ENST00000561004 SPDYE1Q8NFV5 336 aaPredicted RBP15.66■□□□□ 0.1
AP4E1-204ENST00000561004 FBLN2P98095 1184 aa15.65■□□□□ 0.1
AP4E1-204ENST00000561004 C19orf67A6NJJ6 358 aa15.59■□□□□ 0.09
AP4E1-204ENST00000561004 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
AP4E1-204ENST00000561004 LHX8Q68G74 356 aa15.58■□□□□ 0.08
AP4E1-204ENST00000561004 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
AP4E1-204ENST00000561004 GABBR2O75899 941 aa15.52■□□□□ 0.08
AP4E1-204ENST00000561004 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
AP4E1-204ENST00000561004 CLCN6P51797 869 aa15.35■□□□□ 0.05
AP4E1-204ENST00000561004 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
AP4E1-204ENST00000561004 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
AP4E1-204ENST00000561004 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
AP4E1-204ENST00000561004 ZBTB22O15209 634 aa15.17■□□□□ 0.02
AP4E1-204ENST00000561004 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
AP4E1-204ENST00000561004 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
AP4E1-204ENST00000561004 PLSCR2Q9NRY7 297 aa15.15■□□□□ 0.02
AP4E1-204ENST00000561004 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
AP4E1-204ENST00000561004 DCBLD2Q96PD2 775 aa15.09■□□□□ 0.01
AP4E1-204ENST00000561004 POTEIP0CG38 1075 aa15.06■□□□□ 0
AP4E1-204ENST00000561004 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
AP4E1-204ENST00000561004 ZNF579Q8NAF0 562 aaKnown RBP14.89□□□□□ -0.03
AP4E1-204ENST00000561004 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
AP4E1-204ENST00000561004 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
AP4E1-204ENST00000561004 PAK3O75914 559 aaPredicted RBP14.73□□□□□ -0.05
AP4E1-204ENST00000561004 PCDH10Q9P2E7 1040 aa14.72□□□□□ -0.05
AP4E1-204ENST00000561004 OTUD5Q96G74 571 aa14.71□□□□□ -0.05
AP4E1-204ENST00000561004 POTEMA6NI47 508 aa14.69□□□□□ -0.06
AP4E1-204ENST00000561004 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
AP4E1-204ENST00000561004 POTEGQ6S5H5 508 aa14.62□□□□□ -0.07
AP4E1-204ENST00000561004 CREBZFQ9NS37 354 aa14.6□□□□□ -0.07
AP4E1-204ENST00000561004 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
AP4E1-204ENST00000561004 POTEB2H3BUK9 544 aa14.53□□□□□ -0.08
AP4E1-204ENST00000561004 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
AP4E1-204ENST00000561004 C7P10643 843 aa14.45□□□□□ -0.1
AP4E1-204ENST00000561004 SLC39A7Q92504 469 aa14.45□□□□□ -0.1
AP4E1-204ENST00000561004 PHF12Q96QT6 1004 aa14.45□□□□□ -0.1
AP4E1-204ENST00000561004 METRNQ9UJH8 293 aa14.41□□□□□ -0.1
AP4E1-204ENST00000561004 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
AP4E1-204ENST00000561004 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms