RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 TTC12Q9H892 705 aaPredicted RBP12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 ST18O60284 1047 aa12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 MPNDQ8N594 471 aa12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 C3P01024 1663 aa12.66□□□□□ -0.38
SUPT16H-207ENST00000557394 PIK3R4Q99570 1358 aa12.65□□□□□ -0.38
SUPT16H-207ENST00000557394 ZNF771Q7L3S4 317 aaPredicted RBP12.65□□□□□ -0.38
SUPT16H-207ENST00000557394 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
SUPT16H-207ENST00000557394 KIAA1524Q8TCG1 905 aa12.65□□□□□ -0.38
SUPT16H-207ENST00000557394 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.39
SUPT16H-207ENST00000557394 BRD1O95696 1058 aa12.65□□□□□ -0.39
SUPT16H-207ENST00000557394 SLFN14P0C7P3 912 aa12.65□□□□□ -0.39
SUPT16H-207ENST00000557394 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.39
SUPT16H-207ENST00000557394 ADGRB3O60242 1522 aa12.65□□□□□ -0.39
SUPT16H-207ENST00000557394 MTHFSP49914 203 aa12.64□□□□□ -0.39
SUPT16H-207ENST00000557394 EGFL6Q8IUX8 553 aa12.64□□□□□ -0.39
SUPT16H-207ENST00000557394 RIMS1Q86UR5 1692 aaKnown RBP12.64□□□□□ -0.39
SUPT16H-207ENST00000557394 ADCY5O95622 1261 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 AEBP1Q8IUX7 1158 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 CTNNA3Q9UI47 895 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 MYOM2P54296 1465 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 IRX5P78411 483 aaPredicted RBP12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 SEMA3FQ13275 785 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
SUPT16H-207ENST00000557394 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 PLEKHM2Q8IWE5 1019 aa12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 SIRT2Q8IXJ6 389 aa12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 NCBP1Q09161 790 aaKnown RBP12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 NBPF20Q3BBV1 942 aa12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 NBPF11Q86T75 865 aa12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 CARD10Q9BWT7 1032 aa12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
SUPT16H-207ENST00000557394 TTC36A6NLP5 189 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 TPM3P06753 285 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 TMPOP42166 694 aaKnown RBP12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 INTS3Q68E01 1043 aaKnown RBP12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 MORC2Q9Y6X9 1032 aaPredicted RBP12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 CCDC66A2RUB6 948 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 TMEM131LA2VDJ0 1609 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 PTCH1Q13635 1447 aa12.61□□□□□ -0.39
SUPT16H-207ENST00000557394 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 CUL4AQ13619 759 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 PPLO60437 1756 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 ARHGAP45Q92619 1136 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 KCNF1Q9H3M0 494 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 TNRQ92752 1358 aa12.6□□□□□ -0.39
SUPT16H-207ENST00000557394 IRF6O14896 467 aa12.59□□□□□ -0.39
SUPT16H-207ENST00000557394 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
SUPT16H-207ENST00000557394 IDI1Q13907 227 aa12.59□□□□□ -0.39
SUPT16H-207ENST00000557394 TERF2Q15554 542 aa12.59□□□□□ -0.39
SUPT16H-207ENST00000557394 TMEM87AQ8NBN3 555 aa12.59□□□□□ -0.39
SUPT16H-207ENST00000557394 TULP2O00295 520 aa12.58□□□□□ -0.4
SUPT16H-207ENST00000557394 KCNJ4P48050 445 aa12.58□□□□□ -0.4
SUPT16H-207ENST00000557394 CCDC183Q5T5S1 534 aa12.58□□□□□ -0.4
SUPT16H-207ENST00000557394 RINLQ6ZS11 566 aa12.58□□□□□ -0.4
SUPT16H-207ENST00000557394 NSD2O96028 1365 aa12.58□□□□□ -0.4
SUPT16H-207ENST00000557394 APBB1O00213 710 aa12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 MCM2P49736 904 aa12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 RPGRIP1LQ68CZ1 1315 aa12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 FAM53CQ9NYF3 392 aa12.57□□□□□ -0.4
SUPT16H-207ENST00000557394 CHGAP10645 457 aaKnown RBP12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 ABCC4O15439 1325 aa12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 REC8O95072 547 aa12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 CEP120Q8N960 986 aa12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 FUCA2Q9BTY2 467 aa12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 COL3A1P02461 1466 aaPredicted RBP12.56□□□□□ -0.4
SUPT16H-207ENST00000557394 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 HCLS1P14317 486 aaPredicted RBP12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 MX1P20591 662 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 CREBRFQ8IUR6 639 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 KIF18AQ8NI77 898 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 DCTPP1Q9H773 170 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 TMCO4Q5TGY1 634 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
SUPT16H-207ENST00000557394 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
SUPT16H-207ENST00000557394 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
SUPT16H-207ENST00000557394 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms